Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p30760 Brassica napus
Aa31LG1G17860 Aethionema arabicum
Aa31LG6G3290 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3203 Anthoceros agrestis
Actinidia20586 Actinidia chinensis
Ah.01g017700 Amaranthus hybridus
AL8G41310 Arabidopsis lyrata
Aqoxy144s004 Aquilegia oxysepala
Aqoxy2G01868 Aquilegia oxysepala
Aqoxy6G02995 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.44ERQ5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M18VWQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZZ08SY Arachis hypogaea
AT5G64050 Arabidopsis thaliana
ATR0605G166 Amborella trichopoda
Atru.BG.54.p Acer truncatum
Atru.chr5.3580 Acer truncatum
AUR62010207 Chenopodium quinoa
AUR62013197 Chenopodium quinoa
BcaB02g09792 Brassica carinata
BcaC01g02661 Brassica carinata
BolC3t18485H Brassica oleracea
BraA06t26018Z Brassica rapa
C03p62220 Brassica napus
CAN.G1645.8 Capsicum annuum
CARHR277960 Cardamine hirsuta
Carub.0008s2483 Capsella rubella
Ca_25889_v3 Cicer arietinum L.
CBR_g25940 Chara braunii
Cc09_g10910 Coffea canephora
CDE06G2564 Ceratophyllum demersum
Cfa005395 Carpinus fangiana
Cfa005396 Carpinus fangiana
Cfa023769 Carpinus fangiana
Ciclev10028098m.g Citrus clementina
CiPaw.05G095000 Carya illinoinensis
ClCG02G003240 Citrullus lanatus
COL.COLO4_03850 Corchorus olitorius
COL.COLO4_29152 Corchorus olitorius
Cpa.g.c29182.1 Carica papaya
Cre07.g313700 Chlamydomonas reinhardtii
CsaV3_7G002150 Cucumis sativus L.
CSS0015047 Camellia sinensis var. sinensis
CSS0018221 Camellia sinensis var. sinensis
DCAR_001519 Daucus carota
DCAR_006224 Daucus carota
Dinv12922 Davidia involucrata
Dinv14185 Davidia involucrata
Dinv37341 Davidia involucrata
Dinv41859 Davidia involucrata
Duzib052G0849 Durio zibethinus
Duzib093G0106 Durio zibethinus
Duzib132G0508 Durio zibethinus
Duzib248G1564 Durio zibethinus
ECA233G3220 Erigeron canadensis
EL10Ac9g21557 Beta vulgaris
Eucgr.H05005 Eucalyptus grandis
FAN04G1942 Fragaria x ananassa
FAN08G2453 Fragaria x ananassa
FAN15G2332 Fragaria x ananassa
FAN18G1553 Fragaria x ananassa
FAN20G1299 Fragaria x ananassa
FAN24G2999 Fragaria x ananassa
FAN27G0598 Fragaria x ananassa
FvH4_2g14910 Fragaria vesca
Glyma.03G097900 Glycine max
Glyma.07G124000 Glycine max
Gohir.A01G011600 Gossypium hirsutum
Gohir.D01G012800 Gossypium hirsutum
Gorai.002G014600 Gossypium raimondii
GSVIVG01023855001 Vitis vinifera
HanXRQChr14g0432441 Helianthus annuus
HanXRQChr14g0455171 Helianthus annuus
Haze_01956 Corylus avellana
Haze_26742 Corylus avellana
Haze_26758 Corylus avellana
HPP92_019666 Vanilla planifolia
HPP92_019667 Vanilla planifolia
Hund06352 Selenicereus undatus
Lalb_Chr07g0194811 Lupinus albus
Lalb_Chr12g0210191 Lupinus albus
Lj3g0023171 Lotus japonicus
Lj5C170T16 Lonicera japonica
Lj9C409G5 Lonicera japonica
Lj9C409G6 Lonicera japonica
Lsat_1_v5_gn_8_119500 Lactuca sativa
Lsat_1_v5_gn_8_156340 Lactuca sativa
Manes.02G091600 Manihot esculenta
Mapoly0005s0181 Marchantia polymorpha
MBI01_g28404_MAGBIO Magnolia biondii
MCO11G616 Micromonas commoda
MD05G1011800 Malus domestica
MD10G1011800 Malus domestica
Medtr8g009900 Medicago truncatula
MELO3C015693.2 Cucumis melo
Migut.B00003 Erythranthe guttata
MSTRG.16959 Avicennia marina
Nitab4.5_0001220g0040 Nicotiana tabacum
Nitab4.5_0005317g0010 Nicotiana tabacum
Nitab4.5_0010601g0010 Nicotiana tabacum
Oeu006114.1 Olea europaea
Os02g0121000 Oryza sativa ssp. japonica
Peaxi162Scf00362g00137 Petunia axillaris
PGR004G1860 Punica granatum
PGR042G3506 Punica granatum
PGR142G3202 Punica granatum
Phvul.010G038400 Phaseolus vulgaris
Potri.009G169700 Populus trichocarpa
Pp3c1_10010 Physcomitrium patens
Pp3c2_37890 Physcomitrium patens
PRCOL_00001874 Prasinoderma coloniale
Prupe.8G016800 Prunus persica
Psat4g215760 Pisum sativum
Psat6g037120 Pisum sativum
PSO210G0895 Papaver somniferum
PSO675G0919 Papaver somniferum
QL04p064927 Quercus lobata
QL11p056821 Quercus lobata
RcHm_v2.0_Chr2g0162471 Rosa chinensis
RcHm_v2.0_Chr3g0490481 Rosa chinensis
RcHm_v2.0_Chr6g0277491 Rosa chinensis
Rhsim04G0008200 Rhododendron simsii
Sabra04G0140300 Salix brachista
SalBow1G4726 Salvia bowleyana
SalBow6G7034 Salvia bowleyana
Sc08g0002050 Simmondsia chinensis
Sed0003916 Sechium edule
Sed0020521 Sechium edule
SEGI_01300 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30258 Striga asiatica
SGA_v2.0_scaffold5G02667 Striga asiatica
SMO134G0063 Selaginella moellendorffii
Solyc01g112290.4 Solanum lycopersicum
Sopen01g054400 Solanum pennellii
Sp2g27120 Schrenkiella parvula
TAR628G0288 Trochodendron aralioides
THA.LOC104800058 Tarenaya hassleriana
Thecc.02G148100 Theobroma cacao
Thhalv10003868m.g Eutrema salsugineum
TPR.G17355 Trifolium pratense
TWI59G1375 Tripterygium wilfordii
unitig_21.g20422 Utricularia gibba
vmacro16288 Vaccinium macrocarpon
VMungo0331G1808 Vigna mungo
Zm00001eb208250 Zea mays
Zm00001eb230310 Zea mays
Zm00001eb428990 Zea mays

User provided reference genes

Program Settings