Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p34970 Brassica napus
Aa31LG8G6520 Aethionema arabicum
Actinidia04428 Actinidia chinensis
Ah.09g232120 Amaranthus hybridus
AL3G33190 Arabidopsis lyrata
Aqoxy6G00300 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BEU0Z4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SMG2WU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T96GLE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TCU5QQ Arachis hypogaea
AT3G19720 Arabidopsis thaliana
ATR0090G021 Amborella trichopoda
Atru.chr6.903 Acer truncatum
AUR62027388 Chenopodium quinoa
AUR62027389 Chenopodium quinoa
AUR62031303 Chenopodium quinoa
BcaB04g20681 Brassica carinata
BcaC09g48932 Brassica carinata
BcaC09g48935 Brassica carinata
BcaC09g48936 Brassica carinata
BolC1t04403H Brassica oleracea
BolC1t04406H Brassica oleracea
BraA01t03580Z Brassica rapa
C01p44380 Brassica napus
C01p44410 Brassica napus
CAN.G1.26 Capsicum annuum
CANSAT56G3597 Cannabis sativa
CARHR095240 Cardamine hirsuta
CARHR095250 Cardamine hirsuta
Carub.0003s1960 Capsella rubella
Ca_18334_v3 Cicer arietinum L.
CBR_g24372 Chara braunii
CBR_g86243 Chara braunii
Cc02_g21860 Coffea canephora
CDE08G0182 Ceratophyllum demersum
CDE08G0927 Ceratophyllum demersum
Cfa005576 Carpinus fangiana
Ciclev10000359m.g Citrus clementina
CiPaw.06G150900 Carya illinoinensis
ClCG09G013630 Citrullus lanatus
COL.COLO4_20871 Corchorus olitorius
Cpa.g.sc63.25 Carica papaya
Cpa.g.sc63.26 Carica papaya
Cre10.g433050 Chlamydomonas reinhardtii
CsaV3_7G006040 Cucumis sativus L.
CSS0009626 Camellia sinensis var. sinensis
CSS0037915 Camellia sinensis var. sinensis
DCAR_001802 Daucus carota
Dinv19325 Davidia involucrata
Dinv24223 Davidia involucrata
Dinv24225 Davidia involucrata
Dinv24226 Davidia involucrata
Duzib052G0049 Durio zibethinus
ECA236G3503 Erigeron canadensis
EL10Ac8g19337 Beta vulgaris
Eucgr.I02694 Eucalyptus grandis
FAN04G1076 Fragaria x ananassa
FAN08G3311 Fragaria x ananassa
FAN13G1064 Fragaria x ananassa
FAN18G1729 Fragaria x ananassa
FvH4_4g02780 Fragaria vesca
FvH4_4g02800 Fragaria vesca
FvH4_5g30610 Fragaria vesca
Glyma.05G120400 Glycine max
Glyma.08G075100 Glycine max
Gohir.A03G171500 Gossypium hirsutum
Gohir.D02G194900 Gossypium hirsutum
Gorai.005G217700 Gossypium raimondii
GSVIVG01029707001 Vitis vinifera
HanXRQChr11g0337601 Helianthus annuus
Haze_10783 Corylus avellana
HPP92_016129 Vanilla planifolia
Hund06705 Selenicereus undatus
Lalb_Chr07g0189431 Lupinus albus
Lj4g0026324 Lotus japonicus
Lj9A318G98 Lonicera japonica
Lsat_1_v5_gn_7_79780 Lactuca sativa
Manes.10G130600 Manihot esculenta
Mapoly0079s0059 Marchantia polymorpha
MBI03_g13502_MAGBIO Magnolia biondii
MBI06_g38379_MAGBIO Magnolia biondii
MBI15_g36994_MAGBIO Magnolia biondii
MBI17_g20081_MAGBIO Magnolia biondii
MBI17_g38976_MAGBIO Magnolia biondii
MBI17_g41034_MAGBIO Magnolia biondii
MCO03G066 Micromonas commoda
MD08G1222200 Malus domestica
MD15G1415600 Malus domestica
Medtr4g094300 Medicago truncatula
MELO3C018688.2 Cucumis melo
Migut.B00641 Erythranthe guttata
MSTRG.16563 Avicennia marina
Nitab4.5_0000078g0180 Nicotiana tabacum
Nitab4.5_0010375g0010 Nicotiana tabacum
Oeu037204.1 Olea europaea
Oeu041988.1 Olea europaea
Oeu047373.1 Olea europaea
Oeu047374.1 Olea europaea
Oeu055066.1 Olea europaea
Oeu055067.1 Olea europaea
Os12g0178700 Oryza sativa ssp. japonica
Peaxi162Scf00003g03733 Petunia axillaris
PGR142G3913 Punica granatum
PGSC0003DMG400005500 Solanum tuberosum
Phvul.002G206400 Phaseolus vulgaris
Potri.006G254900 Populus trichocarpa
Potri.018G027001 Populus trichocarpa
Pp3c1_7590 Physcomitrium patens
Pp3c2_33000 Physcomitrium patens
Pp3c2_33410 Physcomitrium patens
PRCOL_00002637 Prasinoderma coloniale
Prupe.1G560000 Prunus persica
Psat7g097600 Pisum sativum
PSO170G4843 Papaver somniferum
PSO528G0068 Papaver somniferum
QL08p030853 Quercus lobata
QL08p030872 Quercus lobata
QL09p047099 Quercus lobata
QL09p047105 Quercus lobata
QL11p019306 Quercus lobata
QL11p019326 Quercus lobata
RcHm_v2.0_Chr7g0225491 Rosa chinensis
Rhsim05G0111000 Rhododendron simsii
Sabra02G0091200 Salix brachista
Sabra06G0199100 Salix brachista
SalBow5G1047 Salvia bowleyana
Sc14g0003200 Simmondsia chinensis
Sed0005211 Sechium edule
Sed0011242 Sechium edule
SEGI_00685 Sequoiadendron giganteum
SGA_v2.0_scaffold332G48941 Striga asiatica
SMO169G0059 Selaginella moellendorffii
Solyc10g047050.2 Solanum lycopersicum
Sopen10g017000 Solanum pennellii
Sp3g17760 Schrenkiella parvula
TAR628G0147 Trochodendron aralioides
THA.LOC104826527 Tarenaya hassleriana
Thecc.02G143700 Theobroma cacao
Thhalv10020106m.g Eutrema salsugineum
TPR.G31207 Trifolium pratense
TPR.G31481 Trifolium pratense
TPR.G8453 Trifolium pratense
TWI23G1171 Tripterygium wilfordii
TWI59G0763 Tripterygium wilfordii
vmacro19912 Vaccinium macrocarpon
VMungo0251G0911 Vigna mungo
Zm00001eb408290 Zea mays

User provided reference genes

Program Settings