Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia06222 Actinidia chinensis
Actinidia07969 Actinidia chinensis
Aqoxy1G00392 Aquilegia oxysepala
Aqoxy2G00413 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1L47SY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HP7LLE Arachis hypogaea
ATR1096G052 Amborella trichopoda
Atru.chr3.3001 Acer truncatum
AUR62000208 Chenopodium quinoa
AUR62006554 Chenopodium quinoa
CAN.G134.16 Capsicum annuum
CANSAT54G2608 Cannabis sativa
Ca_23977_v3 Cicer arietinum L.
CBR_g41532 Chara braunii
Cc09_g07690 Coffea canephora
CDE02G0171 Ceratophyllum demersum
CDE02G0295 Ceratophyllum demersum
CDE02G2293 Ceratophyllum demersum
CDE02G2432 Ceratophyllum demersum
CDE02G3379 Ceratophyllum demersum
CDE02G4802 Ceratophyllum demersum
CDE04G0220 Ceratophyllum demersum
CDE04G1798 Ceratophyllum demersum
CDE07G1185 Ceratophyllum demersum
CDE09G0004 Ceratophyllum demersum
CDE09G0976 Ceratophyllum demersum
Cfa009893 Carpinus fangiana
Cfa010948 Carpinus fangiana
Ciclev10001735m.g Citrus clementina
Ciclev10027071m.g Citrus clementina
Ciclev10027126m.g Citrus clementina
Ciclev10027284m.g Citrus clementina
Ciclev10027488m.g Citrus clementina
Ciclev10027527m.g Citrus clementina
CiPaw.14G009200 Carya illinoinensis
CiPaw.14G111500 Carya illinoinensis
ClCG08G002660 Citrullus lanatus
ClCG08G010820 Citrullus lanatus
COL.COLO4_20731 Corchorus olitorius
Cpa.g.sc169.39 Carica papaya
Cre01.g033950 Chlamydomonas reinhardtii
CsaV3_6G035720 Cucumis sativus L.
CSS0003849 Camellia sinensis var. sinensis
DCAR_025325 Daucus carota
Dinv32010 Davidia involucrata
Duzib106G1278 Durio zibethinus
Duzib128G0392 Durio zibethinus
ECA248G3166 Erigeron canadensis
EL10Ac4g10102 Beta vulgaris
Eucgr.G03212 Eucalyptus grandis
Eucgr.J00681 Eucalyptus grandis
FAN01G1292 Fragaria x ananassa
FAN03G0125 Fragaria x ananassa
FAN06G0520 Fragaria x ananassa
FAN10G2457 Fragaria x ananassa
FvH4_7g03700 Fragaria vesca
Glyma.13G192200 Glycine max
Glyma.15G230500 Glycine max
Gohir.A06G174600 Gossypium hirsutum
Gohir.A10G189100 Gossypium hirsutum
Gohir.D06G184600 Gossypium hirsutum
Gohir.D10G197000 Gossypium hirsutum
Gorai.010G215900 Gossypium raimondii
Gorai.011G220200 Gossypium raimondii
GSVIVG01036640001 Vitis vinifera
GSVIVG01037328001 Vitis vinifera
HanXRQChr01g0003701 Helianthus annuus
HanXRQChr11g0341211 Helianthus annuus
Haze_02996 Corylus avellana
Haze_23255 Corylus avellana
Hma1.2p1_1796F.1_g302710 Hydrangea macrophylla
HPP92_021193 Vanilla planifolia
Hund07434 Selenicereus undatus
Hund21969 Selenicereus undatus
Lalb_Chr03g0032191 Lupinus albus
Lalb_Chr19g0132951 Lupinus albus
Lj3g0014782 Lotus japonicus
Lj7A493G34 Lonicera japonica
Lsat_1_v5_gn_1_117920 Lactuca sativa
Manes.04G156500 Manihot esculenta
Manes.11G007250 Manihot esculenta
MBI19_g20792_MAGBIO Magnolia biondii
MD02G1278000 Malus domestica
MD07G1045900 Malus domestica
MELO3C011380.2 Cucumis melo
Migut.B01249 Erythranthe guttata
Migut.N01858 Erythranthe guttata
MSTRG.20501 Avicennia marina
MSTRG.5076 Avicennia marina
Nitab4.5_0002838g0130 Nicotiana tabacum
Nitab4.5_0004168g0100 Nicotiana tabacum
Nn7g36763 Nelumbo nucifera
Oeu013069.1 Olea europaea
Oeu013075.1 Olea europaea
Oeu014630.2 Olea europaea
Os01g0280000 Oryza sativa ssp. japonica
Os01g0618000 Oryza sativa ssp. japonica
Os11g0525900 Oryza sativa ssp. japonica
Peaxi162Scf00220g00417 Petunia axillaris
PGR031G0380 Punica granatum
PGR119G1568 Punica granatum
PGSC0003DMG403003285 Solanum tuberosum
Phvul.011G201500 Phaseolus vulgaris
Potri.001G030900 Populus trichocarpa
Potri.003G194300 Populus trichocarpa
Prupe.2G042700 Prunus persica
Psat0s3527g0040 Pisum sativum
Psat1g148000 Pisum sativum
Psat1g148040 Pisum sativum
Psat2g140280 Pisum sativum
Psat2g140320 Pisum sativum
Psat4g145120 Pisum sativum
Psat4g190960 Pisum sativum
Psat7g158200 Pisum sativum
Psat7g158320 Pisum sativum
PSO339G0382 Papaver somniferum
PSO384G4770 Papaver somniferum
QL01p016028 Quercus lobata
QL01p016772 Quercus lobata
QL04p021121 Quercus lobata
QL93p0049_0022 Quercus lobata
RcHm_v2.0_Chr1g0326491 Rosa chinensis
Rhsim07G0069000 Rhododendron simsii
Sabra01G0022200 Salix brachista
Sabra03G0145000 Salix brachista
SalBow5G3115 Salvia bowleyana
SalBow6G0970 Salvia bowleyana
SalBow6G1153 Salvia bowleyana
SalBow6G1292 Salvia bowleyana
Sc06g0004720 Simmondsia chinensis
Sed0024277 Sechium edule
SEGI_32986 Sequoiadendron giganteum
SGA_v2.0_scaffold232G43481 Striga asiatica
SMO367G0260 Selaginella moellendorffii
Solyc01g096570.3 Solanum lycopersicum
Sopen01g040300 Solanum pennellii
TAR633G0536 Trochodendron aralioides
TAR636G2479 Trochodendron aralioides
TAR636G3532 Trochodendron aralioides
THA.LOC104799326 Tarenaya hassleriana
THA.LOC104826755 Tarenaya hassleriana
Thecc.10G142900 Theobroma cacao
TPR.G8528 Trifolium pratense
TWI38G1285 Tripterygium wilfordii
TWI63G1294 Tripterygium wilfordii
unitig_61.g26369 Utricularia gibba
vmacro13768 Vaccinium macrocarpon
VMungo1127G1151 Vigna mungo
Zm00001eb129080 Zea mays

User provided reference genes

Program Settings