Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p00580 Brassica napus
A08p23440 Brassica napus
Aa31LG6G15580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1023 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1027 Anthoceros agrestis
Actinidia16045 Actinidia chinensis
Actinidia16046 Actinidia chinensis
Actinidia16048 Actinidia chinensis
Actinidia36610 Actinidia chinensis
Ah.03g142660 Amaranthus hybridus
AL7G11890 Arabidopsis lyrata
Aqoxy6G00539 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.P05418 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WRB6NJ Arachis hypogaea
AT4G39690 Arabidopsis thaliana
ATR0661G561 Amborella trichopoda
Atru.chr4.263 Acer truncatum
AUR62002041 Chenopodium quinoa
AUR62003756 Chenopodium quinoa
BcaB03g12266 Brassica carinata
BcaC01g00311 Brassica carinata
BcaNung00891 Brassica carinata
BcaNung05547 Brassica carinata
BolC1t00074H Brassica oleracea
BolC3t20076H Brassica oleracea
BraA01t00065Z Brassica rapa
BraA01t00066Z Brassica rapa
BraA08t34298Z Brassica rapa
C01p00710 Brassica napus
C03p78130 Brassica napus
CAN.G727.1 Capsicum annuum
CANSAT01G2911 Cannabis sativa
CARHR247030 Cardamine hirsuta
Carub.0007s0157 Capsella rubella
CBR_g51480 Chara braunii
Cc07_g15670 Coffea canephora
Cc07_g15680 Coffea canephora
CDE04G0927 Ceratophyllum demersum
CDE06G0766 Ceratophyllum demersum
Cfa026870 Carpinus fangiana
Ciclev10025222m.g Citrus clementina
CiPaw.03G138100 Carya illinoinensis
ClCG01G019030 Citrullus lanatus
COL.COLO4_11048 Corchorus olitorius
COL.COLO4_35617 Corchorus olitorius
Cpa.g.sc82.54 Carica papaya
Cpa.g.sc82.56 Carica papaya
Cpa.g.sc82.58 Carica papaya
Cre08.g358950 Chlamydomonas reinhardtii
CsaV3_6G045720 Cucumis sativus L.
CSS0005403 Camellia sinensis var. sinensis
DCAR_001020 Daucus carota
Dinv04895 Davidia involucrata
Dinv16320 Davidia involucrata
Dinv21950 Davidia involucrata
Dinv21951 Davidia involucrata
Dinv21952 Davidia involucrata
Dinv32118 Davidia involucrata
Dinv40591 Davidia involucrata
Dinv41328 Davidia involucrata
Duzib147G0642 Durio zibethinus
Duzib187G0704 Durio zibethinus
ECA246G4277 Erigeron canadensis
EL10Ac6g15063 Beta vulgaris
Eucgr.I00377 Eucalyptus grandis
FAN19G2080 Fragaria x ananassa
FAN23G2445 Fragaria x ananassa
FAN26G3332 Fragaria x ananassa
FAN26G3387 Fragaria x ananassa
FAN28G0310 Fragaria x ananassa
FvH4_1g21670 Fragaria vesca
Glyma.05G181700 Glycine max
Glyma.08G139400 Glycine max
Gohir.A11G198900 Gossypium hirsutum
Gohir.A12G091122 Gossypium hirsutum
Gohir.D11G225200 Gossypium hirsutum
Gohir.D12G094600 Gossypium hirsutum
Gorai.007G242500 Gossypium raimondii
Gorai.008G103200 Gossypium raimondii
GSVIVG01022188001 Vitis vinifera
HanXRQChr02g0041141 Helianthus annuus
Haze_24997 Corylus avellana
Hma1.2p1_0070F.1_g037670 Hydrangea macrophylla
Hma1.2p1_0070F.1_g037680 Hydrangea macrophylla
HPP92_016473 Vanilla planifolia
HPP92_027138 Vanilla planifolia
HPP92_027139 Vanilla planifolia
Hund13647 Selenicereus undatus
Lalb_Chr07g0184941 Lupinus albus
Lalb_Chr13g0296081 Lupinus albus
Lj4A880G51 Lonicera japonica
Lj4g0017071 Lotus japonicus
Lsat_1_v5_gn_5_40701 Lactuca sativa
Manes.12G138700 Manihot esculenta
Mapoly0001s0396 Marchantia polymorpha
MBI05_g00773_MAGBIO Magnolia biondii
MBI05_g36740_MAGBIO Magnolia biondii
MBI05_g36741_MAGBIO Magnolia biondii
MCO12G391 Micromonas commoda
MD01G1023900 Malus domestica
MD15G1329400 Malus domestica
Medtr8g091480 Medicago truncatula
MELO3C007782.2 Cucumis melo
Migut.H02393 Erythranthe guttata
MSTRG.23325 Avicennia marina
MSTRG.2547 Avicennia marina
Nitab4.5_0000518g0040 Nicotiana tabacum
Nitab4.5_0000518g0050 Nicotiana tabacum
Nitab4.5_0001095g0090 Nicotiana tabacum
Nn5g28998 Nelumbo nucifera
Nn5g31279 Nelumbo nucifera
Os04g0636600 Oryza sativa ssp. japonica
Peaxi162Scf00204g00620 Petunia axillaris
PGR004G1500 Punica granatum
Phvul.002G262700 Phaseolus vulgaris
Potri.005G080200 Populus trichocarpa
Potri.007G087100 Populus trichocarpa
Pp3c3_27510 Physcomitrium patens
Prupe.6G178900 Prunus persica
Psat7g053360 Pisum sativum
PSO133G0077 Papaver somniferum
PSO541G2636 Papaver somniferum
QL06p050536 Quercus lobata
RcHm_v2.0_Chr2g0115541 Rosa chinensis
Rhsim10G0156300 Rhododendron simsii
Sabra05G0065800 Salix brachista
Sabra07G0072000 Salix brachista
Sc03g0002320 Simmondsia chinensis
Sed0006076 Sechium edule
SEGI_00052 Sequoiadendron giganteum
SEGI_01476 Sequoiadendron giganteum
SEGI_04627 Sequoiadendron giganteum
SEGI_07937 Sequoiadendron giganteum
SEGI_21175 Sequoiadendron giganteum
SGA_v2.0_scaffold51G18730 Striga asiatica
SMO174G0199 Selaginella moellendorffii
SMO197G0017 Selaginella moellendorffii
Sopen04g024290 Solanum pennellii
Sp7g36200 Schrenkiella parvula
TAR381G0204 Trochodendron aralioides
TAR381G1578 Trochodendron aralioides
THA.LOC104807708 Tarenaya hassleriana
Thecc.01G107800 Theobroma cacao
Thhalv10024641m.g Eutrema salsugineum
TPR.G2186 Trifolium pratense
TWI53G0980 Tripterygium wilfordii
unitig_0.g2479 Utricularia gibba
vmacro12934 Vaccinium macrocarpon
VMungo0251G2130 Vigna mungo
Zm00001eb069160 Zea mays
Zm00001eb431730 Zea mays

User provided reference genes

Program Settings