Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p25310 Brassica napus
A05p05650 Brassica napus
Aa31LG1G27160 Aethionema arabicum
Aa31LG6G10720 Aethionema arabicum
Aa31sc1021G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5506 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.172 Anthoceros agrestis
Actinidia09581 Actinidia chinensis
Actinidia31455 Actinidia chinensis
AL4G44860 Arabidopsis lyrata
Aqoxy7G00483 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.32Q5MD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GZV6IQ Arachis hypogaea
AT2G45690 Arabidopsis thaliana
ATR0757G181 Amborella trichopoda
ATR0757G223 Amborella trichopoda
Atru.chr5.381_Atru.chr5.382 Acer truncatum
AUR62004281 Chenopodium quinoa
AUR62033376 Chenopodium quinoa
BcaB01g03258 Brassica carinata
BcaB02g09018 Brassica carinata
BcaC01g05112 Brassica carinata
BcaC02g12192 Brassica carinata
BolC3t15369H Brassica oleracea
BolC4t22283H Brassica oleracea
BraA03t11735Z Brassica rapa
BraA05t19537Z Brassica rapa
C03p30200 Brassica napus
C04p06610 Brassica napus
C07p07230 Brassica napus
CAN.G170.62 Capsicum annuum
CAN.G919.13 Capsicum annuum
CANSAT56G0719 Cannabis sativa
CARHR140910 Cardamine hirsuta
Carub.0004s2834 Capsella rubella
Ca_23774_v3 Cicer arietinum L.
CBR_g3181 Chara braunii
Cc02_g37080 Coffea canephora
Cc09_g02920 Coffea canephora
CDE11G0368 Ceratophyllum demersum
CDE11G0585 Ceratophyllum demersum
Cfa001810 Carpinus fangiana
Ciclev10020702m.g Citrus clementina
Ciclev10023945m.g Citrus clementina
CiPaw.01G257600 Carya illinoinensis
ClCG06G000170 Citrullus lanatus
COL.COLO4_12639 Corchorus olitorius
Cpa.g.sc18.178 Carica papaya
CsaV3_6G005940 Cucumis sativus L.
CSS0023679 Camellia sinensis var. sinensis
CSS0047010 Camellia sinensis var. sinensis
DCAR_006900 Daucus carota
Dinv32412 Davidia involucrata
Dinv43746 Davidia involucrata
Duzib133G0793 Durio zibethinus
Duzib138G1778 Durio zibethinus
ECA236G5005 Erigeron canadensis
EL10Ac1g00976 Beta vulgaris
Eucgr.D02393 Eucalyptus grandis
Eucgr.D02397 Eucalyptus grandis
Eucgr.D02410 Eucalyptus grandis
FAN01G1324 Fragaria x ananassa
FAN06G3277 Fragaria x ananassa
FAN06G3416 Fragaria x ananassa
FAN10G0991 Fragaria x ananassa
FAN10G2694 Fragaria x ananassa
FvH4_7g12840 Fragaria vesca
Glyma.03G018700 Glycine max
Glyma.04G148600 Glycine max
Glyma.07G080200 Glycine max
Gohir.A07G144600 Gossypium hirsutum
Gohir.A11G084200 Gossypium hirsutum
Gohir.D07G150500 Gossypium hirsutum
Gorai.001G172600 Gossypium raimondii
GSVIVG01027589001 Vitis vinifera
HanXRQChr04g0121731 Helianthus annuus
HanXRQChr06g0169351 Helianthus annuus
Haze_16704 Corylus avellana
HPP92_004960 Vanilla planifolia
Hund16967 Selenicereus undatus
Hund27330 Selenicereus undatus
Lalb_Chr01g0021231 Lupinus albus
Lalb_Chr10g0097591 Lupinus albus
Lalb_Chr17g0340041 Lupinus albus
Lalb_Chr19g0127171 Lupinus albus
Lj3g0018651 Lotus japonicus
Lj3g0020425 Lotus japonicus
Lj7C524T7 Lonicera japonica
Lsat_1_v5_gn_7_8041 Lactuca sativa
Manes.01G263200 Manihot esculenta
Manes.05G040900 Manihot esculenta
Mapoly0047s0037 Marchantia polymorpha
MBI04_g28567_MAGBIO Magnolia biondii
MBI11_g13051_MAGBIO Magnolia biondii
MD02G1195700 Malus domestica
MD02G1195800 Malus domestica
Medtr8g033040 Medicago truncatula
MELO3C022521.2 Cucumis melo
Migut.B01673 Erythranthe guttata
MSTRG.20784 Avicennia marina
Nitab4.5_0001127g0010 Nicotiana tabacum
Nitab4.5_0001901g0030 Nicotiana tabacum
Nitab4.5_0005459g0020 Nicotiana tabacum
Nitab4.5_0013229g0020 Nicotiana tabacum
Nn1g01309 Nelumbo nucifera
Os02g0123200 Oryza sativa ssp. japonica
Peaxi162Scf00021g00232 Petunia axillaris
Peaxi162Scf00114g00211 Petunia axillaris
PGR031G2979 Punica granatum
PGSC0003DMG400000005 Solanum tuberosum
PGSC0003DMG400007146 Solanum tuberosum
Phvul.010G089200 Phaseolus vulgaris
Potri.002G152300 Populus trichocarpa
Potri.014G078300 Populus trichocarpa
Pp3c20_6130 Physcomitrium patens
PRCOL_00005618 Prasinoderma coloniale
Prupe.2G152800 Prunus persica
Psat4g200880 Pisum sativum
PSO478G4379 Papaver somniferum
PSO782G2788 Papaver somniferum
QL08p050919 Quercus lobata
RcHm_v2.0_Chr1g0351871 Rosa chinensis
RcHm_v2.0_Chr1g0351881 Rosa chinensis
RcHm_v2.0_Chr1g0351921 Rosa chinensis
RcHm_v2.0_Chr5g0079751 Rosa chinensis
Rhsim07G0022400 Rhododendron simsii
Sabra02G0120600 Salix brachista
Sabra14G0053800 Salix brachista
SalBow7G0216 Salvia bowleyana
Sc02g0002260 Simmondsia chinensis
Sed0004795 Sechium edule
Sed0027777 Sechium edule
SEGI_15318 Sequoiadendron giganteum
SGA_v2.0_scaffold153G37057 Striga asiatica
SHI13492 Sapria himalayana
SMO147G0187 Selaginella moellendorffii
Solyc01g091900.3 Solanum lycopersicum
Solyc06g074460.4 Solanum lycopersicum
Sopen01g037670 Solanum pennellii
Sopen06g030930 Solanum pennellii
Sp4g27730 Schrenkiella parvula
TAR629G0568 Trochodendron aralioides
TAR636G2513 Trochodendron aralioides
THA.LOC104817269 Tarenaya hassleriana
Thecc.01G370200 Theobroma cacao
Thhalv10001499m.g Eutrema salsugineum
TPR.G17395 Trifolium pratense
TPR.G17590 Trifolium pratense
TWI23G0970 Tripterygium wilfordii
TWI59G0538 Tripterygium wilfordii
vmacro13348 Vaccinium macrocarpon
VMungo0331G0142 Vigna mungo
Zm00001eb208530 Zea mays

User provided reference genes

Program Settings