Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p44340 Brassica napus
Actinidia07389 Actinidia chinensis
AL2G39690 Arabidopsis lyrata
Aqoxy3G00727_Aqoxy3G00728 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1JZ67N Arachis hypogaea
AT1G79220 Arabidopsis thaliana
ATR0796G246 Amborella trichopoda
AUR62018586 Chenopodium quinoa
AUR62020832 Chenopodium quinoa
BcaB02g08675 Brassica carinata
BcaC08g47487 Brassica carinata
BcaC08g47489 Brassica carinata
BolC6t40328H Brassica oleracea
BolC6t40329H Brassica oleracea
BraA07t31942Z Brassica rapa
C06p53110 Brassica napus
C06p53130 Brassica napus
CAN.G1057.22 Capsicum annuum
CANSAT80G0679 Cannabis sativa
Carub.0002s2609 Capsella rubella
Ca_23201_v3 Cicer arietinum L.
Cc06_g09150 Coffea canephora
CDE02G3781 Ceratophyllum demersum
CDE04G0495 Ceratophyllum demersum
Cfa000971 Carpinus fangiana
Cfa000972 Carpinus fangiana
Cfa019269 Carpinus fangiana
Ciclev10007175m.g Citrus clementina
CiPaw.11G062300 Carya illinoinensis
CiPaw.11G062500 Carya illinoinensis
COL.COLO4_02984 Corchorus olitorius
COL.COLO4_32241 Corchorus olitorius
COL.COLO4_32247 Corchorus olitorius
COL.COLO4_32250 Corchorus olitorius
Cpa.g.sc36.174 Carica papaya
CsaV3_6G042780 Cucumis sativus L.
CsaV3_6G042790 Cucumis sativus L.
CSS0004676 Camellia sinensis var. sinensis
CSS0022520 Camellia sinensis var. sinensis
DCAR_013726 Daucus carota
Dinv42483 Davidia involucrata
Duzib205G0692 Durio zibethinus
EL10Ac5g10930 Beta vulgaris
Eucgr.B03144 Eucalyptus grandis
FAN11G3190 Fragaria x ananassa
FAN16G3266 Fragaria x ananassa
FAN21G4068 Fragaria x ananassa
FAN25G1100 Fragaria x ananassa
FAN25G3737 Fragaria x ananassa
FvH4_3g15040 Fragaria vesca
FvH4_3g15050 Fragaria vesca
Glyma.16G085500 Glycine max
Gohir.A07G022225 Gossypium hirsutum
Gohir.D01G034100 Gossypium hirsutum
Gohir.D07G024300 Gossypium hirsutum
Gorai.001G025500 Gossypium raimondii
Gorai.002G041600 Gossypium raimondii
Gorai.002G041700 Gossypium raimondii
Gorai.002G042200 Gossypium raimondii
GSVIVG01036787001 Vitis vinifera
HanXRQChr05g0152291 Helianthus annuus
Haze_05550 Corylus avellana
Haze_07644 Corylus avellana
Hund18158 Selenicereus undatus
Lalb_Chr07g0194461 Lupinus albus
Lj2C15T15 Lonicera japonica
Lj3g0011819 Lotus japonicus
Lsat_1_v5_gn_4_10120 Lactuca sativa
Manes.14G010600 Manihot esculenta
MD10G1208300 Malus domestica
MD10G1208400 Malus domestica
Medtr8g012210 Medicago truncatula
MELO3C007519.2 Cucumis melo
Migut.D00034 Erythranthe guttata
MSTRG.21720 Avicennia marina
Nitab4.5_0000049g0020 Nicotiana tabacum
Nitab4.5_0000049g0040 Nicotiana tabacum
Nitab4.5_0001189g0010 Nicotiana tabacum
Nitab4.5_0001189g0020 Nicotiana tabacum
Nitab4.5_0001804g0010 Nicotiana tabacum
Nn7g35901 Nelumbo nucifera
Oeu044747.1 Olea europaea
Oeu052570.1 Olea europaea
Peaxi162Scf00292g00042 Petunia axillaris
Peaxi162Scf00535g00737 Petunia axillaris
Peaxi162Scf00535g00738 Petunia axillaris
PGR142G0128 Punica granatum
Phvul.010G025900 Phaseolus vulgaris
Potri.007G069100 Populus trichocarpa
Prupe.4G134600 Prunus persica
Prupe.4G134700 Prunus persica
Psat4g205840 Pisum sativum
QL04p063277 Quercus lobata
RcHm_v2.0_Chr5g0024801 Rosa chinensis
RcHm_v2.0_Chr5g0024811 Rosa chinensis
Rhsim05G0210400 Rhododendron simsii
Rhsim06G0242400 Rhododendron simsii
Sabra07G0056500 Salix brachista
SalBow6G1027 Salvia bowleyana
Sc09g0007570 Simmondsia chinensis
Sed0007670 Sechium edule
SEGI_00816 Sequoiadendron giganteum
SEGI_01013 Sequoiadendron giganteum
SEGI_01788 Sequoiadendron giganteum
SEGI_03513 Sequoiadendron giganteum
SEGI_04008 Sequoiadendron giganteum
SEGI_07074 Sequoiadendron giganteum
SEGI_07700 Sequoiadendron giganteum
SEGI_08433 Sequoiadendron giganteum
SEGI_09506 Sequoiadendron giganteum
SEGI_10653 Sequoiadendron giganteum
SEGI_10870 Sequoiadendron giganteum
SEGI_11497 Sequoiadendron giganteum
SEGI_11615 Sequoiadendron giganteum
SEGI_12505 Sequoiadendron giganteum
SEGI_12839 Sequoiadendron giganteum
SEGI_14515 Sequoiadendron giganteum
SEGI_15437 Sequoiadendron giganteum
SEGI_15647 Sequoiadendron giganteum
SEGI_17689 Sequoiadendron giganteum
SEGI_18603 Sequoiadendron giganteum
SEGI_21774 Sequoiadendron giganteum
SEGI_23645 Sequoiadendron giganteum
SEGI_26419 Sequoiadendron giganteum
SEGI_27100 Sequoiadendron giganteum
SEGI_27496 Sequoiadendron giganteum
SEGI_27926 Sequoiadendron giganteum
SEGI_28250 Sequoiadendron giganteum
SEGI_28494 Sequoiadendron giganteum
SEGI_29297 Sequoiadendron giganteum
SEGI_29542 Sequoiadendron giganteum
SEGI_30629 Sequoiadendron giganteum
SEGI_35541 Sequoiadendron giganteum
SEGI_37058 Sequoiadendron giganteum
SEGI_38750 Sequoiadendron giganteum
SEGI_39624 Sequoiadendron giganteum
SEGI_40316 Sequoiadendron giganteum
SEGI_41151 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25698 Striga asiatica
SMO343G0065 Selaginella moellendorffii
Solyc02g067960.3 Solanum lycopersicum
Sopen02g017090 Solanum pennellii
Sp5g34270 Schrenkiella parvula
TAR624G0684 Trochodendron aralioides
THA.LOC104813610 Tarenaya hassleriana
Thecc.06G226700 Theobroma cacao
Thecc.07G180700 Theobroma cacao
Thecc.07G180800 Theobroma cacao
Thhalv10019771m.g Eutrema salsugineum
TPR.G16444 Trifolium pratense
TWI23G0839 Tripterygium wilfordii
TWI59G1404 Tripterygium wilfordii
unitig_85.g27191 Utricularia gibba
vmacro11698 Vaccinium macrocarpon

User provided reference genes

Program Settings