Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p02240 Brassica napus
Aa31LG10G3070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.928 Anthoceros agrestis
Actinidia00927 Actinidia chinensis
Actinidia13908 Actinidia chinensis
Actinidia13909 Actinidia chinensis
Actinidia27825 Actinidia chinensis
Ah.02g115950 Amaranthus hybridus
Ah.16g102910 Amaranthus hybridus
Ah.16g104720 Amaranthus hybridus
AL1G59680 Arabidopsis lyrata
Aqoxy1G00756 Aquilegia oxysepala
Aqoxy6G02595 Aquilegia oxysepala
Aqoxy7G01280 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BR1H5V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V0Z2W7 Arachis hypogaea
AT1G51740 Arabidopsis thaliana
ATR0736G027 Amborella trichopoda
Atru.chr12.285 Acer truncatum
Atru.chr12.324 Acer truncatum
AUR62032348 Chenopodium quinoa
AUR62041843 Chenopodium quinoa
BcaB02g11053 Brassica carinata
BcaB07g33630 Brassica carinata
BcaC08g43344 Brassica carinata
BcaC08g43936 Brassica carinata
BolC6t35797H Brassica oleracea
BraA06t23434Z Brassica rapa
C06p07040 Brassica napus
CAN.G2159.1 Capsicum annuum
CAN.G308.66 Capsicum annuum
CANSAT21G1253 Cannabis sativa
CARHR041910 Cardamine hirsuta
Carub.0001s4061 Capsella rubella
Ca_25497_v3 Cicer arietinum L.
CBR_g29687 Chara braunii
Cc02_g20660 Coffea canephora
CDE09G0086 Ceratophyllum demersum
Cfa017589 Carpinus fangiana
Ciclev10016032m.g Citrus clementina
Ciclev10032191m.g Citrus clementina
CiPaw.10G131000 Carya illinoinensis
ClCG11G006420 Citrullus lanatus
COL.COLO4_25609 Corchorus olitorius
Cpa.g.sc19.234 Carica papaya
Cre17.g711450 Chlamydomonas reinhardtii
CsaV3_6G001590 Cucumis sativus L.
CSS0010099 Camellia sinensis var. sinensis
CSS0016003 Camellia sinensis var. sinensis
DCAR_011775 Daucus carota
Dinv20933 Davidia involucrata
Dinv21011 Davidia involucrata
Duzib106G0320 Durio zibethinus
ECA233G3311 Erigeron canadensis
EL10Ac2g04766 Beta vulgaris
Eucgr.G03020 Eucalyptus grandis
Eucgr.L03566 Eucalyptus grandis
FAN01G0026 Fragaria x ananassa
FAN06G0806 Fragaria x ananassa
FAN10G1216 Fragaria x ananassa
FAN10G3109 Fragaria x ananassa
FvH4_7g12790 Fragaria vesca
Glyma.07G091000 Glycine max
Glyma.09G184900 Glycine max
Glyma.17G199500 Glycine max
Gohir.A10G228400 Gossypium hirsutum
Gohir.D10G242400 Gossypium hirsutum
Gorai.011G278800 Gossypium raimondii
GSVIVG01016388001 Vitis vinifera
HanXRQChr12g0369401 Helianthus annuus
HanXRQChr16g0528961 Helianthus annuus
Haze_20561 Corylus avellana
HPP92_004405 Vanilla planifolia
HPP92_027811 Vanilla planifolia
Hund16007 Selenicereus undatus
Lalb_Chr14g0371191 Lupinus albus
Lalb_Chr22g0353041 Lupinus albus
Lj1A432T27 Lonicera japonica
Lj1C433T7 Lonicera japonica
Lj1C435T9 Lonicera japonica
Lj1C949T1 Lonicera japonica
Lj1g0004796 Lotus japonicus
Lj2g0017902 Lotus japonicus
Lsat_1_v5_gn_3_37540 Lactuca sativa
Lsat_1_v5_gn_8_14200 Lactuca sativa
Lsat_1_v5_gn_9_12660 Lactuca sativa
Manes.10G019100 Manihot esculenta
Mapoly0024s0083 Marchantia polymorpha
MCO05G144 Micromonas commoda
MD02G1196300 Malus domestica
MD07G1124900 Malus domestica
Medtr6g084580 Medicago truncatula
MELO3C008270.2 Cucumis melo
Migut.F01566 Erythranthe guttata
MSTRG.8305 Avicennia marina
Nitab4.5_0000344g0160 Nicotiana tabacum
Nitab4.5_0002828g0150 Nicotiana tabacum
Nitab4.5_0011923g0010 Nicotiana tabacum
Nitab4.5_0012769g0010 Nicotiana tabacum
Nn5g27977 Nelumbo nucifera
Oeu013001.1 Olea europaea
Oeu032670.1 Olea europaea
Os04g0530400 Oryza sativa ssp. japonica
Os12g0154400 Oryza sativa ssp. japonica
Peaxi162Scf00010g01114 Petunia axillaris
Peaxi162Scf00064g00126 Petunia axillaris
PGR142G0534 Punica granatum
PGSC0003DMG400006372 Solanum tuberosum
PGSC0003DMG400022548 Solanum tuberosum
Phvul.004G157700 Phaseolus vulgaris
Potri.008G063100 Populus trichocarpa
Potri.010G194300 Populus trichocarpa
Pp3c6_24680 Physcomitrium patens
Prupe.2G152400 Prunus persica
Psat1g037840 Pisum sativum
PSO339G3467 Papaver somniferum
PSO384G2817 Papaver somniferum
PSO585G0029 Papaver somniferum
QL07p043722 Quercus lobata
RcHm_v2.0_Chr1g0351821 Rosa chinensis
Rhsim09G0171300 Rhododendron simsii
Sabra08G0046500 Salix brachista
Sabra10G0149400 Salix brachista
SalBow6G7043 Salvia bowleyana
Sc11g0007520 Simmondsia chinensis
Sc11g0007530 Simmondsia chinensis
Sed0006926 Sechium edule
SEGI_31890 Sequoiadendron giganteum
SEGI_41058 Sequoiadendron giganteum
SGA_v2.0_scaffold130G34221 Striga asiatica
SHI03532 Sapria himalayana
SMO356G0668 Selaginella moellendorffii
Solyc03g033850.3 Solanum lycopersicum
Solyc04g071730.3 Solanum lycopersicum
Sopen03g006610 Solanum pennellii
Sopen04g027710 Solanum pennellii
Sp1g38390 Schrenkiella parvula
TAR369G1012 Trochodendron aralioides
TAR623G1788 Trochodendron aralioides
THA.LOC104816565 Tarenaya hassleriana
Thecc.10G137500 Theobroma cacao
Thhalv10011542m.g Eutrema salsugineum
TPR.G16993 Trifolium pratense
TPR.G27934 Trifolium pratense
TWI09G1390 Tripterygium wilfordii
TWI73G0601 Tripterygium wilfordii
unitig_0.g2163 Utricularia gibba
vmacro01597 Vaccinium macrocarpon
vmacro10073 Vaccinium macrocarpon
vmacro10074 Vaccinium macrocarpon
vmacro10891 Vaccinium macrocarpon
VMungo0464G2049 Vigna mungo
Zm00001eb427200 Zea mays
Zm00001eb429110 Zea mays

User provided reference genes

Program Settings