Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p38480 Brassica napus
A05p33830 Brassica napus
Aa31LG8G2800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3613 Anthoceros agrestis
Actinidia08821 Actinidia chinensis
Actinidia08822 Actinidia chinensis
Actinidia16006 Actinidia chinensis
Actinidia16007 Actinidia chinensis
Ah.01g021140 Amaranthus hybridus
Ah.06g184670 Amaranthus hybridus
AL3G28180 Arabidopsis lyrata
Aqoxy7G01953 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1G4SNU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AD4PBH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HFN88V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WXP04W Arachis hypogaea
AT3G15550 Arabidopsis thaliana
ATR0083G057 Amborella trichopoda
Atru.chr1.3167 Acer truncatum
AUR62011594 Chenopodium quinoa
AUR62016408 Chenopodium quinoa
BcaB04g20914 Brassica carinata
BcaB06g29595 Brassica carinata
BcaC05g28954 Brassica carinata
BcaC09g48527 Brassica carinata
BcaC09g48528 Brassica carinata
BolC1t04836H Brassica oleracea
BolC5t33833H Brassica oleracea
BraA01t03898Z Brassica rapa
BraA05t22205Z Brassica rapa
C01p48810 Brassica napus
C05p51460 Brassica napus
CAN.G438.96 Capsicum annuum
CANSAT56G4120 Cannabis sativa
CARHR090640 Cardamine hirsuta
Carub.0003s1530 Capsella rubella
Ca_01096_v3 Cicer arietinum L.
Cc04_g03760 Coffea canephora
CDE01G0719 Ceratophyllum demersum
CDE02G1329 Ceratophyllum demersum
Cfa002032 Carpinus fangiana
Ciclev10024977m.g Citrus clementina
CiPaw.01G242500 Carya illinoinensis
ClCG07G012910 Citrullus lanatus
COL.COLO4_12857 Corchorus olitorius
Cpa.g.c32383.1 Carica papaya
Cpa.g.c42332 Carica papaya
Cre17.g717400 Chlamydomonas reinhardtii
CsaV3_3G026670 Cucumis sativus L.
CSS0001459 Camellia sinensis var. sinensis
CSS0020826 Camellia sinensis var. sinensis
DCAR_025463 Daucus carota
Dinv30551 Davidia involucrata
Dinv38075 Davidia involucrata
Duzib160G0698 Durio zibethinus
Duzib235G0494 Durio zibethinus
ECA247G3649 Erigeron canadensis
EL10Ac9g21966 Beta vulgaris
Eucgr.J03029 Eucalyptus grandis
FAN02G3197 Fragaria x ananassa
FAN05G0816 Fragaria x ananassa
FAN07G2703 Fragaria x ananassa
FAN08G3635 Fragaria x ananassa
FAN09G0848 Fragaria x ananassa
FAN14G4493 Fragaria x ananassa
FvH4_6g30700 Fragaria vesca
FvH4_6g37970 Fragaria vesca
Glyma.13G362100 Glycine max
Glyma.15G011700 Glycine max
Gohir.A02G124100 Gossypium hirsutum
Gohir.D03G064900 Gossypium hirsutum
Gorai.002G057500 Gossypium raimondii
GSVIVG01017208001 Vitis vinifera
HanXRQChr02g0032571 Helianthus annuus
Haze_16487 Corylus avellana
Hund00574 Selenicereus undatus
Lalb_Chr22g0351091 Lupinus albus
Lalb_Chr24g0395661 Lupinus albus
Lalb_Chr25g0279551 Lupinus albus
Lj3g0018532 Lotus japonicus
Lj5A66T57 Lonicera japonica
Lj8C335T16 Lonicera japonica
Lsat_1_v5_gn_1_33801 Lactuca sativa
Manes.04G119400 Manihot esculenta
Manes.11G049500 Manihot esculenta
MBI01_g15493_MAGBIO Magnolia biondii
MBI04_g43364_MAGBIO Magnolia biondii
MBI04_g47892_MAGBIO Magnolia biondii
MBI04_g47893_MAGBIO Magnolia biondii
MCO01G153 Micromonas commoda
MD17G1201400 Malus domestica
Medtr1g041460 Medicago truncatula
Medtr1g107505 Medicago truncatula
Medtr2g102680 Medicago truncatula
MELO3C012944.2 Cucumis melo
Migut.B01589 Erythranthe guttata
MSTRG.17159 Avicennia marina
MSTRG.20727 Avicennia marina
Nitab4.5_0000410g0340 Nicotiana tabacum
Nitab4.5_0000410g0350 Nicotiana tabacum
Nitab4.5_0004817g0040 Nicotiana tabacum
Nn2g11880 Nelumbo nucifera
Nn8g39334 Nelumbo nucifera
Oeu000022.1 Olea europaea
Oeu051920.1 Olea europaea
Os01g0176500 Oryza sativa ssp. japonica
Peaxi162Scf00015g00532 Petunia axillaris
PGR031G3493 Punica granatum
PGSC0003DMG400005697 Solanum tuberosum
Phvul.005G173800 Phaseolus vulgaris
Potri.001G175500 Populus trichocarpa
Potri.003G058600 Populus trichocarpa
Pp3c13_19170 Physcomitrium patens
Pp3c20_1400 Physcomitrium patens
Pp3c20_1403 Physcomitrium patens
Pp3c23_18290 Physcomitrium patens
Pp3c23_2990 Physcomitrium patens
Pp3c24_17130 Physcomitrium patens
Pp3c8_15560 Physcomitrium patens
Pp3c8_22450 Physcomitrium patens
Prupe.3G077300 Prunus persica
Psat5g299960 Pisum sativum
PSO017G1026 Papaver somniferum
PSO170G5959 Papaver somniferum
QL05p026953 Quercus lobata
RcHm_v2.0_Chr2g0137071 Rosa chinensis
Rhsim12G0195000 Rhododendron simsii
RhsimUnG0009400 Rhododendron simsii
Sabra01G0137000 Salix brachista
SalBow5G4930 Salvia bowleyana
Sc12g0008970 Simmondsia chinensis
Sed0012410 Sechium edule
SEGI_13982 Sequoiadendron giganteum
SEGI_27484 Sequoiadendron giganteum
SGA_v2.0_scaffold153G36966 Striga asiatica
SHI09686 Sapria himalayana
SMO147G0411 Selaginella moellendorffii
Solyc03g119940.3 Solanum lycopersicum
Sopen03g038820 Solanum pennellii
Sp3g13840 Schrenkiella parvula
TAR383G1056 Trochodendron aralioides
TAR626G1984 Trochodendron aralioides
THA.LOC104812485 Tarenaya hassleriana
THA.LOC104818041 Tarenaya hassleriana
Thecc.06G077700 Theobroma cacao
Thhalv10020202m.g Eutrema salsugineum
TPR.G37249 Trifolium pratense
TWI75G0140 Tripterygium wilfordii
unitig_26.g8885 Utricularia gibba
unitig_26.g8886 Utricularia gibba
unitig_61.g26415 Utricularia gibba
vmacro16932 Vaccinium macrocarpon
VMungo1080G1183 Vigna mungo
Zm00001eb122560 Zea mays
Zm00001eb309970 Zea mays

User provided reference genes

Program Settings