Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p22520 Brassica napus
A05p15870 Brassica napus
Aa31LG5G6930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3522 Anthoceros agrestis
Actinidia08554 Actinidia chinensis
Ah.13g070320 Amaranthus hybridus
Ah.15g090420 Amaranthus hybridus
AL4G24240 Arabidopsis lyrata
Aqoxy1G00774 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CMV3ZL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S44GTI Arachis hypogaea
AT2G29530 Arabidopsis thaliana
Atru.chr3.4045 Acer truncatum
AUR62001717 Chenopodium quinoa
AUR62020055 Chenopodium quinoa
BcaB02g10259 Brassica carinata
BcaB06g28317 Brassica carinata
BolC4t23660H Brassica oleracea
BolC4t27387H Brassica oleracea
BraA04t17797Z Brassica rapa
BraA05t20500Z Brassica rapa
C04p21310 Brassica napus
C04p58670 Brassica napus
CAN.G978.3 Capsicum annuum
CANSAT54G1854 Cannabis sativa
CARHR122870 Cardamine hirsuta
Carub.0004s1058 Capsella rubella
Ca_01298_v3 Cicer arietinum L.
CBR_g3168 Chara braunii
Cc01_g13610 Coffea canephora
Cc06_g01910 Coffea canephora
CDE02G0008 Ceratophyllum demersum
CDE04G2361 Ceratophyllum demersum
Cfa026385 Carpinus fangiana
Ciclev10029702m.g Citrus clementina
CiPaw.13G084300 Carya illinoinensis
CiPaw.14G063000 Carya illinoinensis
ClCG03G001090 Citrullus lanatus
COL.COLO4_19068 Corchorus olitorius
Cre12.g514900 Chlamydomonas reinhardtii
CsaV3_1G035840 Cucumis sativus L.
CSS0004921 Camellia sinensis var. sinensis
CSS0032515 Camellia sinensis var. sinensis
DCAR_005918 Daucus carota
DCAR_007410 Daucus carota
Dinv17073 Davidia involucrata
Dinv34317 Davidia involucrata
Dinv35533 Davidia involucrata
Dinv43017 Davidia involucrata
Duzib150G1644 Durio zibethinus
Duzib168G2386 Durio zibethinus
Duzib170G1093 Durio zibethinus
ECA236G0522 Erigeron canadensis
ECA247G0999 Erigeron canadensis
EL10Ac7g16095 Beta vulgaris
EL10Ac7g17098 Beta vulgaris
Eucgr.B02289 Eucalyptus grandis
FAN11G1128 Fragaria x ananassa
FAN16G1443 Fragaria x ananassa
FAN16G2867 Fragaria x ananassa
FAN21G1099 Fragaria x ananassa
FAN25G2220 Fragaria x ananassa
FvH4_3g37430 Fragaria vesca
Glyma.02G308400 Glycine max
Glyma.13G339700 Glycine max
Glyma.14G004700 Glycine max
Glyma.15G034700 Glycine max
Glyma.15G229800 Glycine max
Gohir.A03G047200 Gossypium hirsutum
Gohir.A05G091300 Gossypium hirsutum
Gohir.D03G120000 Gossypium hirsutum
Gohir.D05G092200 Gossypium hirsutum
Gorai.003G126500 Gossypium raimondii
Gorai.009G094700 Gossypium raimondii
GSVIVG01024832001 Vitis vinifera
HanXRQChr02g0055991 Helianthus annuus
HanXRQChr08g0237601 Helianthus annuus
HanXRQChr09g0243371 Helianthus annuus
HanXRQChr09g0243381 Helianthus annuus
Haze_24227 Corylus avellana
Haze_27300 Corylus avellana
Hma1.2p1_0543F.1_g175360 Hydrangea macrophylla
Hma1.2p1_1521F.1_g288710 Hydrangea macrophylla
HPP92_018167 Vanilla planifolia
HPP92_018179 Vanilla planifolia
Hund18875 Selenicereus undatus
Lalb_Chr22g0352421 Lupinus albus
Lalb_Chr24g0397121 Lupinus albus
Lj3g0011983 Lotus japonicus
Lj4g0001727 Lotus japonicus
Lsat_1_v5_gn_9_25241 Lactuca sativa
Manes.01G166600 Manihot esculenta
Manes.02G124000 Manihot esculenta
Mapoly0052s0053 Marchantia polymorpha
MBI05_g10286_MAGBIO Magnolia biondii
MCO07G332 Micromonas commoda
MD02G1203300 Malus domestica
MD02G1278800 Malus domestica
MD03G1080700 Malus domestica
MD11G1085200 Malus domestica
Medtr2g097870 Medicago truncatula
MELO3C020586.2 Cucumis melo
MELO3C035440.2 Cucumis melo
Migut.J00249 Erythranthe guttata
Migut.L01982 Erythranthe guttata
Nitab4.5_0000880g0120 Nicotiana tabacum
Nitab4.5_0002152g0070 Nicotiana tabacum
Nitab4.5_0002405g0130 Nicotiana tabacum
Nn2g13555 Nelumbo nucifera
Oeu017418.1 Olea europaea
Oeu030799.1 Olea europaea
Oeu036200.1 Olea europaea
Os03g0825400 Oryza sativa ssp. japonica
Os07g0243100 Oryza sativa ssp. japonica
Peaxi162Scf01302g00041 Petunia axillaris
PGR102G3288 Punica granatum
PGSC0003DMG400020830 Solanum tuberosum
PGSC0003DMG402020339 Solanum tuberosum
Phvul.008G288300 Phaseolus vulgaris
Phvul.L008843 Phaseolus vulgaris
Potri.001G246500 Populus trichocarpa
Potri.009G039600 Populus trichocarpa
Pp3c1_35930 Physcomitrium patens
Prupe.6G065200 Prunus persica
Psat5g285840 Pisum sativum
PSO339G1751 Papaver somniferum
PSO384G2886 Papaver somniferum
QL01p028907 Quercus lobata
QL02p079044 Quercus lobata
RcHm_v2.0_Chr5g0067321 Rosa chinensis
Rhsim04G0164100 Rhododendron simsii
Rhsim13G0075400 Rhododendron simsii
Sabra09G0028100 Salix brachista
Sabra16G0149600 Salix brachista
SalBow1G6960 Salvia bowleyana
Sc12g0001090 Simmondsia chinensis
Sed0000742 Sechium edule
Sed0006275 Sechium edule
SEGI_01909 Sequoiadendron giganteum
SHI22087 Sapria himalayana
SMO172G0051 Selaginella moellendorffii
Solyc06g005840.4 Solanum lycopersicum
Solyc09g011760.3 Solanum lycopersicum
Sopen06g001810 Solanum pennellii
Sopen09g006580 Solanum pennellii
Sp4g12260 Schrenkiella parvula
THA.LOC104800711 Tarenaya hassleriana
Thecc.09G309400 Theobroma cacao
Thhalv10017490m.g Eutrema salsugineum
TPR.G13621 Trifolium pratense
TPR.G6876 Trifolium pratense
TWI75G0664 Tripterygium wilfordii
unitig_578.g15888 Utricularia gibba
unitig_8.g4441 Utricularia gibba
vmacro03012 Vaccinium macrocarpon
vmacro08615 Vaccinium macrocarpon
Zm00001eb063090 Zea mays
Zm00001eb211450 Zea mays

User provided reference genes

Program Settings