Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16150 Brassica napus
A03p08790 Brassica napus
A03p55600 Brassica napus
Aa31LG7G11000 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2190 Anthoceros agrestis
Actinidia15838 Actinidia chinensis
Actinidia25587 Actinidia chinensis
AL3G15410 Arabidopsis lyrata
AL7G28340 Arabidopsis lyrata
Aqoxy5G03415 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.28ZGNX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9QW7J0 Arachis hypogaea
AT4G24840 Arabidopsis thaliana
ATR0561G088 Amborella trichopoda
Atru.chr9.1076 Acer truncatum
AUR62025843 Chenopodium quinoa
AUR62029871 Chenopodium quinoa
BcaB01g05188 Brassica carinata
BcaC06g32853 Brassica carinata
BcaNung04937 Brassica carinata
BcaNung06004 Brassica carinata
BolC1t01943H Brassica oleracea
BolC3t13508H Brassica oleracea
BolC7t45874H Brassica oleracea
BraA01t01551Z Brassica rapa
BraA03t10204Z Brassica rapa
BraA03t14627Z Brassica rapa
C01p20140 Brassica napus
C03p10280 Brassica napus
C07p53840 Brassica napus
CAN.G906.5 Capsicum annuum
CANSAT80G2145 Cannabis sativa
CARHR232260 Cardamine hirsuta
Carub.0003s0428 Capsella rubella
Carub.0007s1621 Capsella rubella
Ca_00911_v3 Cicer arietinum L.
CBR_g49627 Chara braunii
Cc07_g18860 Coffea canephora
CDE05G1945 Ceratophyllum demersum
Cfa018837 Carpinus fangiana
Ciclev10018979m.g Citrus clementina
CiPaw.11G008900 Carya illinoinensis
ClCG11G005570 Citrullus lanatus
COL.COLO4_26675 Corchorus olitorius
Cpa.g.sc13.138 Carica papaya
Cre09.g402750 Chlamydomonas reinhardtii
CsaV3_6G002430 Cucumis sativus L.
CSS0037462 Camellia sinensis var. sinensis
DCAR_026221 Daucus carota
Dinv04875 Davidia involucrata
Dinv11159 Davidia involucrata
Duzib138G1537 Durio zibethinus
ECA232G1394 Erigeron canadensis
EL10As4g23416 Beta vulgaris
Eucgr.B00121 Eucalyptus grandis
FAN04G2916 Fragaria x ananassa
FAN06G0151 Fragaria x ananassa
FAN06G1316 Fragaria x ananassa
FAN08G2446 Fragaria x ananassa
FAN13G0766 Fragaria x ananassa
FAN18G3295 Fragaria x ananassa
FvH4_5g08050 Fragaria vesca
Glyma.05G047300 Glycine max
Glyma.17G129100 Glycine max
Gohir.A11G168800 Gossypium hirsutum
Gohir.D11G175000 Gossypium hirsutum
Gorai.007G187600 Gossypium raimondii
GSVIVG01008523001 Vitis vinifera
HanXRQChr09g0273071 Helianthus annuus
Haze_07231 Corylus avellana
Hma1.2p1_0140F.1_g063430 Hydrangea macrophylla
Hma1.2p1_0140F.1_g063440 Hydrangea macrophylla
Hma1.2p1_0140F.1_g063450 Hydrangea macrophylla
Hma1.2p1_1271F.1_g271760 Hydrangea macrophylla
HPP92_006979 Vanilla planifolia
HPP92_007000 Vanilla planifolia
Hund02429 Selenicereus undatus
Lalb_Chr07g0183361 Lupinus albus
Lj4g0012876 Lotus japonicus
Lj9C477T19 Lonicera japonica
Lsat_1_v5_gn_3_118241 Lactuca sativa
Lsat_1_v5_gn_4_76761 Lactuca sativa
Lsat_1_v5_gn_5_92440 Lactuca sativa
Manes.06G118300 Manihot esculenta
Manes.14G052401 Manihot esculenta
Manes.14G052501 Manihot esculenta
Mapoly0003s0046 Marchantia polymorpha
MCO07G105 Micromonas commoda
MD06G1143400 Malus domestica
MD14G1158600 Malus domestica
Medtr0004s0190 Medicago truncatula
Medtr1g076750 Medicago truncatula
Medtr3g105000 Medicago truncatula
Medtr3g105005 Medicago truncatula
Medtr4g103610 Medicago truncatula
Medtr5g009630 Medicago truncatula
Medtr6g087290 Medicago truncatula
Medtr7g104380 Medicago truncatula
Medtr8g045040 Medicago truncatula
MELO3C025044.2 Cucumis melo
Migut.I00508 Erythranthe guttata
Migut.I00509 Erythranthe guttata
Nitab4.5_0001187g0130 Nicotiana tabacum
Nitab4.5_0002497g0060 Nicotiana tabacum
Nn3g16500 Nelumbo nucifera
Oeu056011.1 Olea europaea
Os03g0849600 Oryza sativa ssp. japonica
Peaxi162Scf00045g00192 Petunia axillaris
PGR083G0162 Punica granatum
PGSC0003DMG400026304 Solanum tuberosum
Phvul.003G210200 Phaseolus vulgaris
Potri.012G096100 Populus trichocarpa
Potri.015G094000 Populus trichocarpa
Pp3c14_17740 Physcomitrium patens
Pp3c17_20170 Physcomitrium patens
PRCOL_00002621 Prasinoderma coloniale
Prupe.5G152600 Prunus persica
Psat0s3466g0040 Pisum sativum
PSO063G5574 Papaver somniferum
PSO675G5444 Papaver somniferum
PSO782G5417 Papaver somniferum
QL10p004063 Quercus lobata
RcHm_v2.0_Chr7g0190411 Rosa chinensis
Rhsim02G0055400 Rhododendron simsii
Rhsim04G0209800 Rhododendron simsii
Rhsim08G0188800 Rhododendron simsii
Sabra12G0070400 Salix brachista
Sabra15G0115500 Salix brachista
Sc04g0000720 Simmondsia chinensis
Sc04g0000730 Simmondsia chinensis
Sed0023388 Sechium edule
Sed0026192 Sechium edule
SEGI_01008 Sequoiadendron giganteum
SEGI_19802 Sequoiadendron giganteum
SGA_v2.0_scaffold161G37784 Striga asiatica
SHI28598 Sapria himalayana
SMO117G0159 Selaginella moellendorffii
SMO250G0003 Selaginella moellendorffii
SMO301G0055 Selaginella moellendorffii
SMO347G0349 Selaginella moellendorffii
Solyc08g006660.2 Solanum lycopersicum
Sopen08g002610 Solanum pennellii
Sp6g25960 Schrenkiella parvula
Sp7g22830 Schrenkiella parvula
TAR622G0482 Trochodendron aralioides
THA.LOC104811593 Tarenaya hassleriana
Thecc.06G039500 Theobroma cacao
Thhalv10024490m.g Eutrema salsugineum
TPR.G19226 Trifolium pratense
TPR.G19235 Trifolium pratense
TPR.G22932 Trifolium pratense
TPR.G34490 Trifolium pratense
TWI23G0493 Tripterygium wilfordii
unitig_8.g3033 Utricularia gibba
vmacro19212 Vaccinium macrocarpon
vmacro20276 Vaccinium macrocarpon
VMungo1215G3183 Vigna mungo
Zm00001eb064480 Zea mays
Zm00001eb210790 Zea mays

User provided reference genes

Program Settings