Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p38480 Brassica napus
A06p37770 Brassica napus
Aa31LG11G8830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3627 Anthoceros agrestis
Actinidia17457 Actinidia chinensis
Actinidia18658 Actinidia chinensis
Ah.04g162440 Amaranthus hybridus
AL6G40140 Arabidopsis lyrata
Aqoxy2G03396 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4PM453 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6Q424B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L7F5GT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N9X86H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QABH9B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T4B9X4 Arachis hypogaea
AT5G27970 Arabidopsis thaliana
ATR0697G205 Amborella trichopoda
Atru.chr2.666 Acer truncatum
Atru.chr2.667 Acer truncatum
AUR62000963 Chenopodium quinoa
AUR62005003 Chenopodium quinoa
BcaB07g34188 Brassica carinata
BcaC03g17767 Brassica carinata
BcaNung04259 Brassica carinata
BolC2t11853H Brassica oleracea
BolC7t44581H Brassica oleracea
BraA02t08826Z Brassica rapa
BraA06t26696Z Brassica rapa
C02p57800 Brassica napus
C07p40460 Brassica napus
CAN.G167.11 Capsicum annuum
CANSAT54G0296 Cannabis sativa
CARHR185700 Cardamine hirsuta
Carub.0006s2545 Capsella rubella
Ca_10066_v3 Cicer arietinum L.
CBR_g18881 Chara braunii
CBR_g23067 Chara braunii
Cc02_g31380 Coffea canephora
CDE10G0751 Ceratophyllum demersum
Cfa006478 Carpinus fangiana
Cfa022881 Carpinus fangiana
Cfa022898 Carpinus fangiana
Ciclev10000022m.g Citrus clementina
CiPaw.07G007800 Carya illinoinensis
ClCG03G016280 Citrullus lanatus
COL.COLO4_15257 Corchorus olitorius
Cpa.g.sc117.51 Carica papaya
Cpa.g.sc117.53 Carica papaya
Cpa.g.sc117.56 Carica papaya
Cre13.g575250 Chlamydomonas reinhardtii
CsaV3_1G039670 Cucumis sativus L.
CSS0006895 Camellia sinensis var. sinensis
CSS0009913 Camellia sinensis var. sinensis
DCAR_001927 Daucus carota
Dinv05121 Davidia involucrata
Duzib177G0039 Durio zibethinus
ECA232G0933 Erigeron canadensis
EL10Ac4g09198 Beta vulgaris
EL10Ac8g20356 Beta vulgaris
Eucgr.B01725 Eucalyptus grandis
Eucgr.L01484 Eucalyptus grandis
FAN02G3979 Fragaria x ananassa
FAN05G2697 Fragaria x ananassa
FAN05G3761 Fragaria x ananassa
FAN09G0115 Fragaria x ananassa
FvH4_6g10420 Fragaria vesca
Glyma.05G081451 Glycine max
Glyma.08G365650 Glycine max
Glyma.10G159500 Glycine max
Glyma.20G229100 Glycine max
Gohir.A11G256300 Gossypium hirsutum
Gohir.D11G265950 Gossypium hirsutum
Gohir.D11G266000 Gossypium hirsutum
Gorai.007G286000 Gossypium raimondii
GSVIVG01021873001 Vitis vinifera
HanXRQChr11g0322991 Helianthus annuus
HanXRQChr15g0477961 Helianthus annuus
Haze_04313 Corylus avellana
Haze_04314 Corylus avellana
Hma1.2p1_0083F.1_g042740 Hydrangea macrophylla
HPP92_012122 Vanilla planifolia
HPP92_012130 Vanilla planifolia
HPP92_012131 Vanilla planifolia
Hund06994 Selenicereus undatus
Lalb_Chr06g0167911 Lupinus albus
Lalb_Chr21g0310861 Lupinus albus
Lj5g0005673 Lotus japonicus
Lj7A478G81 Lonicera japonica
Lj7A478T83 Lonicera japonica
Lj7A478T84 Lonicera japonica
Lsat_1_v5_gn_4_142681 Lactuca sativa
Manes.09G157400 Manihot esculenta
Mapoly0167s0007 Marchantia polymorpha
MBI05_g21270_MAGBIO Magnolia biondii
MBI05_g21273_MAGBIO Magnolia biondii
MCO03G609 Micromonas commoda
MD04G1218000 Malus domestica
Medtr1g081710 Medicago truncatula
MELO3C015391.2 Cucumis melo
Migut.B01071 Erythranthe guttata
MSTRG.20441 Avicennia marina
Nitab4.5_0000162g0020 Nicotiana tabacum
Nitab4.5_0000162g0030 Nicotiana tabacum
Nitab4.5_0000921g0010 Nicotiana tabacum
Nitab4.5_0000921g0020 Nicotiana tabacum
Nitab4.5_0000921g0030 Nicotiana tabacum
Nn1g02333 Nelumbo nucifera
Oeu060841.3 Olea europaea
Os01g0772700 Oryza sativa ssp. japonica
Peaxi162Scf01040g00010 Petunia axillaris
Peaxi162Scf01827g00009 Petunia axillaris
PGR083G2727 Punica granatum
Phvul.007G184950 Phaseolus vulgaris
Potri.013G035100 Populus trichocarpa
Pp3c17_790 Physcomitrium patens
PRCOL_00003187 Prasinoderma coloniale
Prupe.6G338000 Prunus persica
Psat6g147640 Pisum sativum
Psat6g147760 Pisum sativum
Psat6g147800 Pisum sativum
PSO210G7697 Papaver somniferum
PSO761G0213 Papaver somniferum
QL03p022358 Quercus lobata
QL08p006198 Quercus lobata
RcHm_v2.0_Chr3g0461321 Rosa chinensis
Rhsim05G0150300 Rhododendron simsii
Sabra13G0034100 Salix brachista
SalBow8G3789 Salvia bowleyana
Sc06g0003710 Simmondsia chinensis
Sed0014385 Sechium edule
SEGI_02301 Sequoiadendron giganteum
SEGI_03716 Sequoiadendron giganteum
SEGI_11157 Sequoiadendron giganteum
SEGI_11331 Sequoiadendron giganteum
SEGI_14855 Sequoiadendron giganteum
SEGI_37886 Sequoiadendron giganteum
SEGI_41322 Sequoiadendron giganteum
SGA_v2.0_scaffold221G42679 Striga asiatica
SHI08350 Sapria himalayana
SMO116G0400 Selaginella moellendorffii
SMO169G0216 Selaginella moellendorffii
SMO202G0005 Selaginella moellendorffii
Solyc09g018340.2 Solanum lycopersicum
Solyc09g018370.4 Solanum lycopersicum
Sopen09g011510 Solanum pennellii
Sopen09g011530 Solanum pennellii
Sp2g20340 Schrenkiella parvula
TAR365G0706 Trochodendron aralioides
THA.LOC104818650 Tarenaya hassleriana
Thecc.05G290600 Theobroma cacao
Thhalv10003510m.g Eutrema salsugineum
TPR.G11136 Trifolium pratense
TWI56G0724 Tripterygium wilfordii
unitig_0.g2223 Utricularia gibba
vmacro19678 Vaccinium macrocarpon
vmacro19680 Vaccinium macrocarpon
VMungo0720G0329 Vigna mungo
VMungo0720G1928 Vigna mungo
Zm00001eb151800 Zea mays
Zm00001eb151820 Zea mays
Zm00001eb151850 Zea mays
Zm00001eb151860 Zea mays

User provided reference genes

Program Settings