Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p42530 Brassica napus
A06p37710 Brassica napus
Aa31LG11G8890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.422 Anthoceros agrestis
Actinidia05750 Actinidia chinensis
Actinidia30910 Actinidia chinensis
Ah.06g192860 Amaranthus hybridus
AL3G15430 Arabidopsis lyrata
Aqoxy179s001 Aquilegia oxysepala
Aqoxy2G03095 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KAQB8D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RD3H93 Arachis hypogaea
AT3G05040 Arabidopsis thaliana
ATR0618G249 Amborella trichopoda
Atru.chr2.639 Acer truncatum
AUR62000939 Chenopodium quinoa
AUR62005028 Chenopodium quinoa
BcaB04g21343 Brassica carinata
BcaC03g17773 Brassica carinata
BcaC05g29989 Brassica carinata
BcaNung04267 Brassica carinata
BcaNung06429 Brassica carinata
BNapus_Darmor_BZH_scaffold_78p01040 Brassica napus
BolC1t05723H Brassica oleracea
BolC2t11857H Brassica oleracea
BolC7t44588H Brassica oleracea
BraA01t04501Z Brassica rapa
BraA01t04627Z Brassica rapa
BraA05t22999Z Brassica rapa
BraA06t26690Z Brassica rapa
C02p57890 Brassica napus
C07p40520 Brassica napus
CAN.G124.14 Capsicum annuum
CAN.G134.202 Capsicum annuum
CAN.G473.63 Capsicum annuum
CANSAT54G2523 Cannabis sativa
CARHR079360 Cardamine hirsuta
CARHR185780 Cardamine hirsuta
Carub.0003s0429 Capsella rubella
Carub.0006s2534 Capsella rubella
Ca_09392_v3 Cicer arietinum L.
Cc02_g32190 Coffea canephora
CDE01G0361 Ceratophyllum demersum
Cfa006495 Carpinus fangiana
Ciclev10000072m.g Citrus clementina
Ciclev10003957m.g Citrus clementina
CiPaw.07G010400 Carya illinoinensis
ClCG02G016280 Citrullus lanatus
COL.COLO4_13624 Corchorus olitorius
Cpa.g.sc117.32 Carica papaya
Cre10.g420250 Chlamydomonas reinhardtii
Cre10.g420400 Chlamydomonas reinhardtii
CsaV3_2G004460 Cucumis sativus L.
CSS0010917 Camellia sinensis var. sinensis
CSS0044605 Camellia sinensis var. sinensis
DCAR_022275 Daucus carota
Dinv04274 Davidia involucrata
Duzib177G1205 Durio zibethinus
ECA238G0831 Erigeron canadensis
EL10Ac4g09231 Beta vulgaris
Eucgr.H04418 Eucalyptus grandis
FAN02G3203 Fragaria x ananassa
FAN05G1088 Fragaria x ananassa
FAN05G3638 Fragaria x ananassa
FAN09G2428 Fragaria x ananassa
FAN09G2922 Fragaria x ananassa
FAN14G1587 Fragaria x ananassa
FvH4_6g04110 Fragaria vesca
FvH4_6g04501 Fragaria vesca
Glyma.02G183700 Glycine max
Glyma.03G243400 Glycine max
Glyma.19G240700 Glycine max
Gohir.A13G106433 Gossypium hirsutum
Gohir.A13G171600 Gossypium hirsutum
Gohir.D13G109200 Gossypium hirsutum
Gohir.D13G177400 Gossypium hirsutum
Gorai.013G122800 Gossypium raimondii
Gorai.013G202700 Gossypium raimondii
GSVIVG01021908001 Vitis vinifera
HanXRQChr14g0446631 Helianthus annuus
Haze_04294 Corylus avellana
Haze_04301 Corylus avellana
HPP92_011286 Vanilla planifolia
HPP92_011287 Vanilla planifolia
HPP92_011308 Vanilla planifolia
HPP92_011309 Vanilla planifolia
HPP92_011310 Vanilla planifolia
Hund07007 Selenicereus undatus
Lalb_Chr04g0261021 Lupinus albus
Lj1g0011638 Lotus japonicus
Lj7A481G46 Lonicera japonica
Lj7C481T10 Lonicera japonica
Lsat_1_v5_gn_2_64920 Lactuca sativa
Manes.09G159100 Manihot esculenta
Mapoly0015s0189 Marchantia polymorpha
MBI18_g14725_MAGBIO Magnolia biondii
MCO07G327 Micromonas commoda
MD04G1216400 Malus domestica
MD12G1232900 Malus domestica
Medtr1g063040 Medicago truncatula
Medtr7g062520 Medicago truncatula
Medtr7g114260 Medicago truncatula
MELO3C004347.2 Cucumis melo
Migut.B01068 Erythranthe guttata
MSTRG.20437 Avicennia marina
Nitab4.5_0000245g0070 Nicotiana tabacum
Nitab4.5_0005289g0020 Nicotiana tabacum
Nitab4.5_0010351g0010 Nicotiana tabacum
Nn3g21301 Nelumbo nucifera
Oeu053262.1 Olea europaea
Os01g0363900 Oryza sativa ssp. japonica
Os11g0513500 Oryza sativa ssp. japonica
Os11g0513900 Oryza sativa ssp. japonica
Os11g0516800 Oryza sativa ssp. japonica
Os11g0517400 Oryza sativa ssp. japonica
Os11g0517800 Oryza sativa ssp. japonica
Os11g0518900 Oryza sativa ssp. japonica
Os11g0519500 Oryza sativa ssp. japonica
Peaxi162Scf00225g00421 Petunia axillaris
PGR004G0471 Punica granatum
PGSC0003DMG400022491 Solanum tuberosum
Phvul.006G097400 Phaseolus vulgaris
Potri.013G032100 Populus trichocarpa
Pp3c11_26800 Physcomitrium patens
Pp3c7_3740 Physcomitrium patens
Prupe.6G336100 Prunus persica
Psat3g008440 Pisum sativum
PSO170G1333 Papaver somniferum
QL03p001130 Quercus lobata
RcHm_v2.0_Chr3g0452661 Rosa chinensis
Rhsim10G0110700 Rhododendron simsii
Sabra13G0030800 Salix brachista
Sabra13G0031100 Salix brachista
Sabra13G0031500 Salix brachista
Sabra13G0031700 Salix brachista
Sabra13G0031800 Salix brachista
SalBow8G4829 Salvia bowleyana
Sc06g0003540 Simmondsia chinensis
Sc06g0003570 Simmondsia chinensis
Sed0012875 Sechium edule
SEGI_22518 Sequoiadendron giganteum
SEGI_23591 Sequoiadendron giganteum
SGA_v2.0_scaffold36G14404 Striga asiatica
SMO145G0253 Selaginella moellendorffii
Solyc01g098170.3 Solanum lycopersicum
Sopen00g006580 Solanum pennellii
Sopen00g006590 Solanum pennellii
Sopen01g041740 Solanum pennellii
Sopen01g041750 Solanum pennellii
Sp2g20420 Schrenkiella parvula
Sp3g03870 Schrenkiella parvula
TAR362G1140 Trochodendron aralioides
THA.LOC104821698 Tarenaya hassleriana
Thecc.05G292400 Theobroma cacao
Thhalv10003536m.g Eutrema salsugineum
Thhalv10011164m.g Eutrema salsugineum
Thhalv10022131m.g Eutrema salsugineum
TPR.G6955 Trifolium pratense
TWI56G1253 Tripterygium wilfordii
unitig_0.g2222 Utricularia gibba
vmacro05244 Vaccinium macrocarpon
VMungo0540G2235 Vigna mungo
Zm00001eb341370 Zea mays

User provided reference genes

Program Settings