Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p14020 Brassica napus
A03p66870 Brassica napus
A04p06990 Brassica napus
A10p12600 Brassica napus
Aa31LG3G11440 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1049 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1050 Anthoceros agrestis
Actinidia00105 Actinidia chinensis
Actinidia05042 Actinidia chinensis
Ah.04g166390 Amaranthus hybridus
Ah.06g181050 Amaranthus hybridus
Ah.06g181060 Amaranthus hybridus
AL8G29720 Arabidopsis lyrata
AL8G31030 Arabidopsis lyrata
Aqoxy1G04042 Aquilegia oxysepala
Aqoxy4G01189 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K6BPDT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KR0ZCF Arachis hypogaea
AT5G55500 Arabidopsis thaliana
ATR0712G174 Amborella trichopoda
Atru.chr2.3600_Atru.chr2.3601 Acer truncatum
AUR62015931 Chenopodium quinoa
AUR62040678 Chenopodium quinoa
BcaB01g04317 Brassica carinata
BcaB01g04318 Brassica carinata
BcaB05g23098 Brassica carinata
BcaB08g35578 Brassica carinata
BcaB08g35906 Brassica carinata
BcaC01g06371 Brassica carinata
BcaNung05846 Brassica carinata
BolC3t14066H Brassica oleracea
BolC9t57326H Brassica oleracea
BolC9t57481H Brassica oleracea
BolC9t57482H Brassica oleracea
BraA01t02793Z Brassica rapa
BraA03t10701Z Brassica rapa
BraA04t16398Z Brassica rapa
BraA10t43362Z Brassica rapa
C03p16460 Brassica napus
C09p46150 Brassica napus
C09p46160 Brassica napus
C09p46170 Brassica napus
CAN.G337.39 Capsicum annuum
CARHR268810 Cardamine hirsuta
Carub.0008s1585 Capsella rubella
Ca_14783_v3 Cicer arietinum L.
Cc05_g14530 Coffea canephora
CDE07G0680 Ceratophyllum demersum
CDE07G1634 Ceratophyllum demersum
Cfa020245 Carpinus fangiana
Ciclev10008121m.g Citrus clementina
CiPaw.11G199400 Carya illinoinensis
ClCG09G020990 Citrullus lanatus
COL.COLO4_09762 Corchorus olitorius
Cpa.g.sc12.209 Carica papaya
CsaV3_7G018720 Cucumis sativus L.
CSS0013990 Camellia sinensis var. sinensis
CSS0014417 Camellia sinensis var. sinensis
CSS0031037 Camellia sinensis var. sinensis
CSS0041250 Camellia sinensis var. sinensis
CSS0044060 Camellia sinensis var. sinensis
CSS0047700 Camellia sinensis var. sinensis
DCAR_016633 Daucus carota
Dinv40824 Davidia involucrata
Duzib170G1061 Durio zibethinus
Duzib213G0745 Durio zibethinus
ECA236G3940 Erigeron canadensis
EL10Ac4g07632 Beta vulgaris
EL10Ac4g07633 Beta vulgaris
Eucgr.F00628 Eucalyptus grandis
Eucgr.F00781 Eucalyptus grandis
Eucgr.F03516 Eucalyptus grandis
Eucgr.I00174 Eucalyptus grandis
FAN11G0890 Fragaria x ananassa
FAN21G2219 Fragaria x ananassa
FAN25G1677 Fragaria x ananassa
FvH4_3g12320 Fragaria vesca
FvH4_3g23790 Fragaria vesca
Glyma.08G324800 Glycine max
Glyma.08G324900 Glycine max
Glyma.18G085100 Glycine max
Glyma.18G085200 Glycine max
Gohir.A01G085900 Gossypium hirsutum
Gohir.A04G010200 Gossypium hirsutum
Gohir.D01G072200 Gossypium hirsutum
Gohir.D05G377800 Gossypium hirsutum
Gorai.002G095200 Gossypium raimondii
Gorai.009G445600 Gossypium raimondii
GSVIVG01037759001 Vitis vinifera
HanXRQChr04g0109771 Helianthus annuus
HanXRQChr17g0546171 Helianthus annuus
Haze_09771 Corylus avellana
HPP92_018936 Vanilla planifolia
HPP92_018937 Vanilla planifolia
Hund01925 Selenicereus undatus
Hund23166 Selenicereus undatus
Lalb_Chr18g0050361 Lupinus albus
Lj1A883T40 Lonicera japonica
Lj6g0007567 Lotus japonicus
Lj8A175T74 Lonicera japonica
Lsat_1_v5_gn_7_114040 Lactuca sativa
Manes.15G064500 Manihot esculenta
Mapoly0007s0065 Marchantia polymorpha
MBI19_g06156_MAGBIO Magnolia biondii
MD03G1190200 Malus domestica
MD11G1206700 Malus domestica
MD11G1206800 Malus domestica
Medtr3g055690 Medicago truncatula
MELO3C024890.2 Cucumis melo
MELO3C033349.2 Cucumis melo
Migut.H01779 Erythranthe guttata
MSTRG.13007 Avicennia marina
MSTRG.14468 Avicennia marina
Nitab4.5_0001160g0150 Nicotiana tabacum
Nitab4.5_0010102g0040 Nicotiana tabacum
Nn1g03279 Nelumbo nucifera
Nn1g03281 Nelumbo nucifera
Oeu019622.1 Olea europaea
Oeu057077.1 Olea europaea
Oeu057079.1 Olea europaea
Os08g0503800 Oryza sativa ssp. japonica
Peaxi162Scf00285g00932 Petunia axillaris
PGR083G2301 Punica granatum
PGSC0003DMG400022194 Solanum tuberosum
Phvul.006G051000 Phaseolus vulgaris
Potri.001G360600 Populus trichocarpa
Pp3c14_26580 Physcomitrium patens
Prupe.4G229800 Prunus persica
Psat5g171920 Pisum sativum
PSO210G4424 Papaver somniferum
PSO302G0308 Papaver somniferum
QL04p097747 Quercus lobata
QL08p008521 Quercus lobata
QL08p008529 Quercus lobata
RcHm_v2.0_Chr5g0041921 Rosa chinensis
RcHm_v2.0_Chr5g0041971 Rosa chinensis
RcHm_v2.0_Chr5g0079391 Rosa chinensis
RcHm_v2.0_Chr5g0080011 Rosa chinensis
Rhsim06G0225600 Rhododendron simsii
Sabra16G0237900 Salix brachista
Sc03g0008140 Simmondsia chinensis
Sed0018719 Sechium edule
Sed0027079 Sechium edule
SEGI_14116 Sequoiadendron giganteum
SGA_v2.0_scaffold478G52227 Striga asiatica
SHI22211 Sapria himalayana
SHI26544 Sapria himalayana
SHI26554 Sapria himalayana
SHI40288 Sapria himalayana
SHI48138 Sapria himalayana
SMO347G0076 Selaginella moellendorffii
Solyc07g065140.4 Solanum lycopersicum
Sopen07g033360 Solanum pennellii
Sp6g17380 Schrenkiella parvula
TAR627G0502 Trochodendron aralioides
THA.LOC104811644 Tarenaya hassleriana
Thecc.07G024300 Theobroma cacao
Thhalv10013238m.g Eutrema salsugineum
TPR.G23588 Trifolium pratense
TWI38G0059 Tripterygium wilfordii
TWI38G0192 Tripterygium wilfordii
unitig_8.g4786 Utricularia gibba
vmacro11570 Vaccinium macrocarpon
VMungo0540G2288 Vigna mungo
Zm00001eb034690 Zea mays

User provided reference genes

Program Settings