Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p30460 Brassica napus
A05p06950 Brassica napus
Aa31LG5G20160 Aethionema arabicum
Aa31LG5G20440 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.275 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1700 Anthoceros agrestis
Actinidia15750 Actinidia chinensis
Actinidia18927 Actinidia chinensis
Ah.09g230610 Amaranthus hybridus
AL2G15030 Arabidopsis lyrata
AL4G36820 Arabidopsis lyrata
Aqoxy3G02531 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ZAL8K4 Arachis hypogaea
AT1G61280 Arabidopsis thaliana
AT2G39445 Arabidopsis thaliana
ATR0626G354 Amborella trichopoda
Atru.chr5.34 Acer truncatum
Atru.chr5.64 Acer truncatum
AUR62010895 Chenopodium quinoa
AUR62010916 Chenopodium quinoa
AUR62021407 Chenopodium quinoa
AUR62021410 Chenopodium quinoa
BcaB02g09119 Brassica carinata
BcaB02g09120 Brassica carinata
BcaB06g29086 Brassica carinata
BcaC02g07404 Brassica carinata
BcaC02g12072 Brassica carinata
BolC4t22431H Brassica oleracea
BolC4t28228H Brassica oleracea
BraA04t18462Z Brassica rapa
BraA05t19659Z Brassica rapa
C04p08280 Brassica napus
C04p67330 Brassica napus
CAN.G756.9 Capsicum annuum
CANSAT35G1700 Cannabis sativa
CARHR051330 Cardamine hirsuta
CARHR134310 Cardamine hirsuta
Carub.0002s0388 Capsella rubella
Carub.0004s0710 Capsella rubella
Carub.0004s2151 Capsella rubella
Ca_01696_v3 Cicer arietinum L.
CBR_g12382 Chara braunii
Cc02_g25750 Coffea canephora
CDE12G0039 Ceratophyllum demersum
Cfa001861 Carpinus fangiana
Cfa018117 Carpinus fangiana
Cfa018800 Carpinus fangiana
Cfa019943 Carpinus fangiana
Cfa022163 Carpinus fangiana
Cfa025555 Carpinus fangiana
Ciclev10022425m.g Citrus clementina
CiPaw.13G021200 Carya illinoinensis
CiPaw.14G015600 Carya illinoinensis
ClCG05G002810 Citrullus lanatus
COL.COLO4_08476 Corchorus olitorius
Cpa.g.sc52.62 Carica papaya
Cre01.g055424 Chlamydomonas reinhardtii
CsaV3_3G010340 Cucumis sativus L.
CSS0001349 Camellia sinensis var. sinensis
CSS0013781 Camellia sinensis var. sinensis
CSS0014990 Camellia sinensis var. sinensis
CSS0040335 Camellia sinensis var. sinensis
DCAR_029527 Daucus carota
Dinv43581 Davidia involucrata
Duzib138G0823 Durio zibethinus
ECA234G1071 Erigeron canadensis
ECA234G1894 Erigeron canadensis
ECA234G1984 Erigeron canadensis
EL10Ac8g18381 Beta vulgaris
Eucgr.E01714 Eucalyptus grandis
FAN03G1356 Fragaria x ananassa
FAN06G3965 Fragaria x ananassa
FAN18G1057 Fragaria x ananassa
FvH4_5g29260 Fragaria vesca
FvH4_7g08700 Fragaria vesca
Glyma.13G219700 Glycine max
Glyma.15G092700 Glycine max
Gohir.A08G156800 Gossypium hirsutum
Gohir.D08G177066 Gossypium hirsutum
Gohir.D08G177200 Gossypium hirsutum
Gorai.004G185000 Gossypium raimondii
Gorai.004G185600 Gossypium raimondii
GSVIVG01026772001 Vitis vinifera
GSVIVG01037228001 Vitis vinifera
HanXRQChr10g0302581 Helianthus annuus
HanXRQChr17g0545891 Helianthus annuus
Haze_02916 Corylus avellana
Hma1.2p1_0973F.1_g243000 Hydrangea macrophylla
Hma1.2p1_1440F.1_g283530 Hydrangea macrophylla
HPP92_020692 Vanilla planifolia
Hund09105 Selenicereus undatus
Lalb_Chr14g0374351 Lupinus albus
Lj3g0019907 Lotus japonicus
Lj3g0025421 Lotus japonicus
Lsat_1_v5_gn_1_2740 Lactuca sativa
Lsat_1_v5_gn_3_35920 Lactuca sativa
Lsat_1_v5_gn_4_36140 Lactuca sativa
Manes.02G122400 Manihot esculenta
Mapoly0030s0033 Marchantia polymorpha
MCO05G667 Micromonas commoda
MD02G1225800 Malus domestica
MD07G1088000 Malus domestica
Medtr2g022850 Medicago truncatula
Medtr2g084540 Medicago truncatula
MELO3C031598.2 Cucumis melo
MELO3C031599.2 Cucumis melo
MELO3C031600.2 Cucumis melo
Migut.K00778 Erythranthe guttata
Migut.K01222 Erythranthe guttata
Migut.N01709 Erythranthe guttata
MSTRG.20657 Avicennia marina
MSTRG.4966 Avicennia marina
Nitab4.5_0004088g0110 Nicotiana tabacum
Nitab4.5_0006873g0030 Nicotiana tabacum
Nn6g34994 Nelumbo nucifera
Os03g0640300 Oryza sativa ssp. japonica
Os10g0569100 Oryza sativa ssp. japonica
Peaxi162Scf00102g01053 Petunia axillaris
PGSC0003DMG400001681 Solanum tuberosum
PGSC0003DMG400001683 Solanum tuberosum
PGSC0003DMG400001711 Solanum tuberosum
PGSC0003DMG400034273 Solanum tuberosum
Phvul.006G166400 Phaseolus vulgaris
Potri.002G134800 Populus trichocarpa
Potri.014G043400 Populus trichocarpa
Pp3c4_15230 Physcomitrium patens
Prupe.2G114700 Prunus persica
Psat2g182760 Pisum sativum
PSO063G7341 Papaver somniferum
PSO541G2071 Papaver somniferum
PSO675G3209 Papaver somniferum
PSO782G1693 Papaver somniferum
QL04p025854 Quercus lobata
RcHm_v2.0_Chr1g0343921 Rosa chinensis
RcHm_v2.0_Chr5g0055501 Rosa chinensis
Rhsim08G0211800 Rhododendron simsii
Sabra02G0105000 Salix brachista
Sabra09G0017000 Salix brachista
Sabra14G0031400 Salix brachista
SalBow4G1179 Salvia bowleyana
SalBow5G4501 Salvia bowleyana
Sed0004229 Sechium edule
Sed0018514 Sechium edule
SEGI_31162 Sequoiadendron giganteum
SGA_v2.0_scaffold45G17247 Striga asiatica
SMO232G0013 Selaginella moellendorffii
SMO241G0031 Selaginella moellendorffii
Solyc01g150146.1 Solanum lycopersicum
Sopen01g035370 Solanum pennellii
Sp4g08170 Schrenkiella parvula
Sp4g21750 Schrenkiella parvula
TAR371G0914 Trochodendron aralioides
TAR371G1121 Trochodendron aralioides
TAR629G2021 Trochodendron aralioides
Thecc.04G104900 Theobroma cacao
Thhalv10017327m.g Eutrema salsugineum
Thhalv10024054m.g Eutrema salsugineum
TPR.G20146 Trifolium pratense
TPR.G23032 Trifolium pratense
TPR.G32380 Trifolium pratense
TWI75G0011 Tripterygium wilfordii
unitig_0.g1328 Utricularia gibba
vmacro19009 Vaccinium macrocarpon
VMungo0540G0738 Vigna mungo
Zm00001eb097750 Zea mays
Zm00001eb212340 Zea mays

User provided reference genes

Program Settings