Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p47680 Brassica napus
A03p66560 Brassica napus
A09p15390 Brassica napus
A09p35740 Brassica napus
A09p59280 Brassica napus
Aa31LG2G870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3490 Anthoceros agrestis
Actinidia02002 Actinidia chinensis
Actinidia14566 Actinidia chinensis
Ah.10g038320 Amaranthus hybridus
AL2G11570 Arabidopsis lyrata
Aqoxy2G03117 Aquilegia oxysepala
Aqoxy7G00313 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4VFV1G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G1AAHV Arachis hypogaea
AT1G63660 Arabidopsis thaliana
ATR0680G380 Amborella trichopoda
ATR0680G421 Amborella trichopoda
ATR1101G056 Amborella trichopoda
Atru.chr9.2181 Acer truncatum
AUR62009455 Chenopodium quinoa
AUR62023137 Chenopodium quinoa
BcaNung07334 Brassica carinata
BolC9t54762H Brassica oleracea
BraA09t37181Z Brassica rapa
BraA09t37854Z Brassica rapa
BraA09t41310Z Brassica rapa
C09p17150 Brassica napus
C09p18660 Brassica napus
C09p27900 Brassica napus
CAN.G774.52 Capsicum annuum
CANSAT21G1770 Cannabis sativa
CANSAT64G0187 Cannabis sativa
CARHR047680 Cardamine hirsuta
Carub.0002s0119 Capsella rubella
Ca_07210_v3 Cicer arietinum L.
Ca_12957_v3 Cicer arietinum L.
Ca_17527_v3 Cicer arietinum L.
CBR_g48399 Chara braunii
Cc06_g21260 Coffea canephora
Cc08_g14800 Coffea canephora
CDE02G0075 Ceratophyllum demersum
CDE02G2749 Ceratophyllum demersum
CDE06G0245 Ceratophyllum demersum
CDE06G1269 Ceratophyllum demersum
Cfa012224 Carpinus fangiana
Cfa023610 Carpinus fangiana
Ciclev10019676m.g Citrus clementina
CiPaw.11G134600 Carya illinoinensis
CiPaw.12G092600 Carya illinoinensis
ClCG01G002660 Citrullus lanatus
COL.COLO4_34472 Corchorus olitorius
Cpa.g.c40776 Carica papaya
Cpa.g.sc74.54 Carica papaya
Cre02.g092900 Chlamydomonas reinhardtii
CsaV3_5G002770 Cucumis sativus L.
CSS0007959 Camellia sinensis var. sinensis
CSS0014359 Camellia sinensis var. sinensis
DCAR_006738 Daucus carota
DCAR_006739 Daucus carota
DCAR_008399 Daucus carota
Dinv37635 Davidia involucrata
Duzib068G0684 Durio zibethinus
Duzib084G1154 Durio zibethinus
ECA233G0272 Erigeron canadensis
ECA233G3991 Erigeron canadensis
ECA246G1826 Erigeron canadensis
EL10Ac2g04411 Beta vulgaris
Eucgr.E00626 Eucalyptus grandis
FAN04G0421 Fragaria x ananassa
FAN08G1277 Fragaria x ananassa
FAN13G2512 Fragaria x ananassa
FAN18G3468 Fragaria x ananassa
FvH4_5g27720 Fragaria vesca
Glyma.05G208400 Glycine max
Glyma.08G015000 Glycine max
Gohir.A03G016700 Gossypium hirsutum
Gohir.A08G182900 Gossypium hirsutum
Gohir.D03G151200 Gossypium hirsutum
Gohir.D08G201400 Gossypium hirsutum
Gorai.003G158400 Gossypium raimondii
Gorai.004G212300 Gossypium raimondii
GSVIVG01010145001 Vitis vinifera
GSVIVG01019748001 Vitis vinifera
HanXRQChr06g0165861 Helianthus annuus
HanXRQChr13g0394231 Helianthus annuus
Haze_08786 Corylus avellana
Hma1.2p1_0209F.1_g088780 Hydrangea macrophylla
HPP92_014989 Vanilla planifolia
Hund14799 Selenicereus undatus
Lalb_Chr05g0224721 Lupinus albus
Lj2A0T39 Lonicera japonica
Lj2A185G23 Lonicera japonica
Lj4g0008271 Lotus japonicus
Lj8A221T67 Lonicera japonica
Lsat_1_v5_gn_3_6581 Lactuca sativa
Lsat_1_v5_gn_6_6601 Lactuca sativa
Manes.02G019600 Manihot esculenta
Manes.08G013300 Manihot esculenta
Mapoly0002s0326 Marchantia polymorpha
MBI17_g24637_MAGBIO Magnolia biondii
MCO08G312 Micromonas commoda
MD06G1084500 Malus domestica
MD14G1105600 Malus domestica
Medtr8g098325 Medicago truncatula
MELO3C005680.2 Cucumis melo
Migut.A00734 Erythranthe guttata
MSTRG.11981 Avicennia marina
Nitab4.5_0000678g0110 Nicotiana tabacum
Nitab4.5_0001615g0080 Nicotiana tabacum
Nn6g33428 Nelumbo nucifera
Oeu009150.1 Olea europaea
Oeu019186.1 Olea europaea
Os08g0326600 Oryza sativa ssp. japonica
Peaxi162Scf00119g00947 Petunia axillaris
PGR042G2758 Punica granatum
PGSC0003DMG400012205 Solanum tuberosum
Phvul.002G290100 Phaseolus vulgaris
Potri.003G128200 Populus trichocarpa
Pp3c3_31480 Physcomitrium patens
Pp3c8_7320 Physcomitrium patens
PRCOL_00000667 Prasinoderma coloniale
Prupe.5G100800 Prunus persica
Psat7g032640 Pisum sativum
PSO478G3502 Papaver somniferum
PSO782G4766 Papaver somniferum
QL09p052209 Quercus lobata
QL12p032840 Quercus lobata
RcHm_v2.0_Chr1g0321151 Rosa chinensis
RcHm_v2.0_Chr1g0356411 Rosa chinensis
RcHm_v2.0_Chr7g0219111 Rosa chinensis
RcHm_v2.0_Chr7g0219471 Rosa chinensis
Rhsim02G0231700 Rhododendron simsii
Sabra01G0078200 Salix brachista
Sabra03G0091200 Salix brachista
Sc01g0009620 Simmondsia chinensis
Sed0021454 Sechium edule
SEGI_10668 Sequoiadendron giganteum
SGA_v2.0_scaffold173G39175 Striga asiatica
SGA_v2.0_scaffold43G16453 Striga asiatica
SHI07141 Sapria himalayana
SMO116G0368 Selaginella moellendorffii
SMO165G0029 Selaginella moellendorffii
Solyc08g081150.4 Solanum lycopersicum
Sopen08g029450 Solanum pennellii
Sp2g01000 Schrenkiella parvula
TAR374G0019 Trochodendron aralioides
TAR375G0364 Trochodendron aralioides
TAR627G0438 Trochodendron aralioides
TAR633G2043 Trochodendron aralioides
TAR633G2425 Trochodendron aralioides
TAR633G2672 Trochodendron aralioides
THA.LOC104809396 Tarenaya hassleriana
THA.LOC104817993 Tarenaya hassleriana
Thecc.03G279500 Theobroma cacao
Thhalv10023408m.g Eutrema salsugineum
TPR.G12833 Trifolium pratense
TWI60G0060 Tripterygium wilfordii
TWI81G0763 Tripterygium wilfordii
unitig_578.g16628 Utricularia gibba
vmacro11363 Vaccinium macrocarpon
vmacro22817 Vaccinium macrocarpon
VMungo0251G3615 Vigna mungo
VMungo0464G0647 Vigna mungo
VMungo0540G0566 Vigna mungo
Zm00001eb434370 Zea mays

User provided reference genes

Program Settings