Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p26990 Brassica napus
A07p44700 Brassica napus
Aa31LG4G1300 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2286 Anthoceros agrestis
Actinidia18265 Actinidia chinensis
Actinidia25487 Actinidia chinensis
Ah.09g231750 Amaranthus hybridus
AL2G40390 Arabidopsis lyrata
AL8G21450 Arabidopsis lyrata
Aqoxy7G02340 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1BZV33 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GHRN5T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W3R70Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W5V7W0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XEX8KQ Arachis hypogaea
AT1G79690 Arabidopsis thaliana
ATR0580G052 Amborella trichopoda
ATR0789G048 Amborella trichopoda
Atru.chr1.2817 Acer truncatum
AUR62002649 Chenopodium quinoa
AUR62034058 Chenopodium quinoa
BcaB02g07234 Brassica carinata
BcaB02g08706 Brassica carinata
BcaC08g47528 Brassica carinata
BcaNung04171 Brassica carinata
BolC6t38132H Brassica oleracea
BolC6t40368H Brassica oleracea
BraA06t24594Z Brassica rapa
BraA07t30343Z Brassica rapa
BraA07t31978Z Brassica rapa
C06p29710 Brassica napus
C06p53520 Brassica napus
CAN.G930.1 Capsicum annuum
CANSAT64G2586 Cannabis sativa
CARHR073460 Cardamine hirsuta
Carub.0002s2655 Capsella rubella
Ca_13679_v3 Cicer arietinum L.
CBR_g49119 Chara braunii
CBR_g49132 Chara braunii
Cc08_g05800 Coffea canephora
CDE02G2004 Ceratophyllum demersum
Cfa001845 Carpinus fangiana
Ciclev10024933m.g Citrus clementina
CiPaw.02G164000 Carya illinoinensis
ClCG09G003440 Citrullus lanatus
COL.COLO4_26790 Corchorus olitorius
COL.COLO4_26791 Corchorus olitorius
Cpa.g.sc167.19 Carica papaya
Cpa.g.sc167.21 Carica papaya
Cre08.g381800 Chlamydomonas reinhardtii
CsaV3_7G031760 Cucumis sativus L.
CsaV3_7G031770 Cucumis sativus L.
CsaV3_7G031780 Cucumis sativus L.
CSS0026873 Camellia sinensis var. sinensis
DCAR_002193 Daucus carota
DCAR_030908 Daucus carota
Dinv21435 Davidia involucrata
Duzib160G0712 Durio zibethinus
ECA233G3708 Erigeron canadensis
ECA240G2553 Erigeron canadensis
ECA240G4106 Erigeron canadensis
EL10Ac8g19421 Beta vulgaris
Eucgr.J03134 Eucalyptus grandis
FAN02G0140 Fragaria x ananassa
FAN02G0630 Fragaria x ananassa
FAN09G0969 Fragaria x ananassa
FAN14G1073 Fragaria x ananassa
FvH4_6g28160 Fragaria vesca
Glyma.13G072500 Glycine max
Glyma.20G046401 Glycine max
Glyma.20G046501 Glycine max
Gohir.A05G304350 Gossypium hirsutum
Gohir.A06G076350 Gossypium hirsutum
Gohir.A07G034550 Gossypium hirsutum
Gohir.A10G000600 Gossypium hirsutum
Gohir.A11G044150 Gossypium hirsutum
Gohir.D02G099801 Gossypium hirsutum
Gohir.D09G001001 Gossypium hirsutum
Gohir.D10G000700 Gossypium hirsutum
Gohir.D12G184901 Gossypium hirsutum
Gohir.D13G121066 Gossypium hirsutum
Gorai.002G214900 Gossypium raimondii
Gorai.006G048700 Gossypium raimondii
Gorai.007G245800 Gossypium raimondii
Gorai.008G198300 Gossypium raimondii
Gorai.009G406300 Gossypium raimondii
Gorai.011G001100 Gossypium raimondii
GSVIVG01016092001 Vitis vinifera
HanXRQChr13g0411161 Helianthus annuus
HanXRQChr17g0558091 Helianthus annuus
Haze_16698 Corylus avellana
Hma1.2p1_0338F.1_g129690 Hydrangea macrophylla
HPP92_017167 Vanilla planifolia
Lalb_Chr18g0048351 Lupinus albus
Lj6g0018144 Lotus japonicus
Lsat_1_v5_gn_0_21180 Lactuca sativa
Lsat_1_v5_gn_0_21260 Lactuca sativa
Lsat_1_v5_gn_3_49001 Lactuca sativa
Lsat_1_v5_gn_3_53241 Lactuca sativa
Lsat_1_v5_gn_4_114980 Lactuca sativa
Lsat_1_v5_gn_5_149700 Lactuca sativa
Lsat_1_v5_gn_6_17241 Lactuca sativa
Lsat_1_v5_gn_6_87921 Lactuca sativa
Manes.11G069700 Manihot esculenta
Mapoly0059s0059 Marchantia polymorpha
MBI14_g16438_MAGBIO Magnolia biondii
MBI14_g16439_MAGBIO Magnolia biondii
MBI14_g16442_MAGBIO Magnolia biondii
MCO12G087 Micromonas commoda
MD00G1188000 Malus domestica
MD00G1188100 Malus domestica
MD00G1188200 Malus domestica
MD09G1228800 Malus domestica
MD09G1229100 Malus domestica
MD17G1227300 Malus domestica
Medtr3g437740 Medicago truncatula
MELO3C023478.2 Cucumis melo
MELO3C023479.2 Cucumis melo
MELO3C023481.2 Cucumis melo
Migut.E01375 Erythranthe guttata
MSTRG.13911 Avicennia marina
Nitab4.5_0000030g0490 Nicotiana tabacum
Nitab4.5_0000030g0500 Nicotiana tabacum
Nitab4.5_0002244g0110 Nicotiana tabacum
Nitab4.5_0002244g0120 Nicotiana tabacum
Nn8g40122 Nelumbo nucifera
Oeu057157.1 Olea europaea
Oeu057158.1 Olea europaea
Os02g0793300 Oryza sativa ssp. japonica
Peaxi162Scf00193g00726 Petunia axillaris
Phvul.006G018900 Phaseolus vulgaris
Potri.003G185600 Populus trichocarpa
Potri.003G185776 Populus trichocarpa
Potri.003G185951 Populus trichocarpa
Pp3c5_190 Physcomitrium patens
Pp3c5_70 Physcomitrium patens
PRCOL_00006051 Prasinoderma coloniale
Prupe.3G104700 Prunus persica
Psat4g022640 Pisum sativum
PSO017G2203 Papaver somniferum
PSO017G5477 Papaver somniferum
PSO170G5168 Papaver somniferum
RcHm_v2.0_Chr2g0132121 Rosa chinensis
RcHm_v2.0_Chr2g0132171 Rosa chinensis
Rhsim08G0202500 Rhododendron simsii
Sabra03G0135800 Salix brachista
Sed0017026 Sechium edule
SEGI_04747 Sequoiadendron giganteum
SEGI_15998 Sequoiadendron giganteum
SEGI_17966 Sequoiadendron giganteum
SEGI_21553 Sequoiadendron giganteum
SEGI_32687 Sequoiadendron giganteum
SGA_v2.0_scaffold121G33058 Striga asiatica
SMO337G0028 Selaginella moellendorffii
Solyc08g075390.4 Solanum lycopersicum
Sopen08g024020 Solanum pennellii
Sp5g34750 Schrenkiella parvula
TAR626G1406 Trochodendron aralioides
THA.LOC104808168 Tarenaya hassleriana
THA.LOC104813593 Tarenaya hassleriana
Thecc.06G048200 Theobroma cacao
Thhalv10018131m.g Eutrema salsugineum
TWI12G1267 Tripterygium wilfordii
unitig_37.g12907 Utricularia gibba
vmacro19079 Vaccinium macrocarpon
VMungo0540G0565 Vigna mungo
VMungo1080G1878 Vigna mungo
Zm00001eb192570 Zea mays

User provided reference genes

Program Settings