Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p10730 Brassica napus
Aa31sc654G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.295 Anthoceros agrestis
Actinidia30923 Actinidia chinensis
Ah.06g195470 Amaranthus hybridus
AL3G11540 Arabidopsis lyrata
AL4G30980 Arabidopsis lyrata
AL7G36090 Arabidopsis lyrata
Aqoxy2G04020 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.N9EJ2X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q65QWU Arachis hypogaea
AT2G34970 Arabidopsis thaliana
AT3G02270 Arabidopsis thaliana
AT4G18300 Arabidopsis thaliana
ATR0564G152 Amborella trichopoda
Atru.chr2.638 Acer truncatum
AUR62000308 Chenopodium quinoa
AUR62006653 Chenopodium quinoa
BcaB02g09493 Brassica carinata
BcaB02g09494 Brassica carinata
BcaB06g28815 Brassica carinata
BcaB06g28816 Brassica carinata
BcaC02g07743 Brassica carinata
BcaC02g11578 Brassica carinata
BolC4t22972H Brassica oleracea
BolC4t27888H Brassica oleracea
BraA05t20017Z Brassica rapa
C04p13820 Brassica napus
CAN.G134.208 Capsicum annuum
CANSAT54G2505 Cannabis sativa
CARHR129130 Cardamine hirsuta
CARHR177970 Cardamine hirsuta
CARHR178030 Cardamine hirsuta
Carub.0004s1666 Capsella rubella
Carub.0007s2297 Capsella rubella
Ca_12868_v3 Cicer arietinum L.
CBR_g23483 Chara braunii
Cc02_g32210 Coffea canephora
CDE05G0178 Ceratophyllum demersum
Ciclev10019027m.g Citrus clementina
CiPaw.13G133200 Carya illinoinensis
ClCG07G016490 Citrullus lanatus
COL.COLO4_36032 Corchorus olitorius
Cpa.g.sc117.30 Carica papaya
Cpa.g.sc117.31 Carica papaya
Cre12.g502200 Chlamydomonas reinhardtii
CsaV3_2G004470 Cucumis sativus L.
CSS0025723 Camellia sinensis var. sinensis
CSS0045127 Camellia sinensis var. sinensis
DCAR_006415 Daucus carota
Dinv01337 Davidia involucrata
Dinv04277 Davidia involucrata
Dinv09830 Davidia involucrata
Duzib177G0815 Durio zibethinus
ECA246G2136 Erigeron canadensis
ECA246G4181 Erigeron canadensis
EL10Ac3g07149 Beta vulgaris
EL10Ac4g09963 Beta vulgaris
Eucgr.H04421 Eucalyptus grandis
Eucgr.L03047 Eucalyptus grandis
FAN09G1100 Fragaria x ananassa
FAN15G1727 Fragaria x ananassa
FAN17G0778 Fragaria x ananassa
FAN20G3151 Fragaria x ananassa
FAN24G1676 Fragaria x ananassa
FAN27G3237 Fragaria x ananassa
FvH4_2g12670 Fragaria vesca
FvH4_4g24061 Fragaria vesca
FvH4_4g24260 Fragaria vesca
Glyma.03G243100 Glycine max
Glyma.11G150600 Glycine max
Glyma.19G240600 Glycine max
Gohir.A13G101100 Gossypium hirsutum
Gohir.D13G104600 Gossypium hirsutum
Gorai.013G117100 Gossypium raimondii
GSVIVG01026774001 Vitis vinifera
GSVIVG01032294001 Vitis vinifera
GSVIVG01032295001 Vitis vinifera
GSVIVG01032326001 Vitis vinifera
GSVIVG01032340001 Vitis vinifera
GSVIVG01032341001 Vitis vinifera
HanXRQChr15g0469811 Helianthus annuus
Haze_04291 Corylus avellana
Haze_14654 Corylus avellana
Hma1.2p1_1636F.1_g294830 Hydrangea macrophylla
HPP92_016859 Vanilla planifolia
HPP92_016860 Vanilla planifolia
HPP92_016871 Vanilla planifolia
HPP92_016926 Vanilla planifolia
Hund07348 Selenicereus undatus
Lalb_Chr15g0076981 Lupinus albus
Lj5g0001865 Lotus japonicus
Lj9A674T60 Lonicera japonica
Lsat_1_v5_gn_3_33301 Lactuca sativa
Lsat_1_v5_gn_6_96941 Lactuca sativa
Manes.09G159400 Manihot esculenta
Mapoly0056s0115 Marchantia polymorpha
MBI12_g33070_MAGBIO Magnolia biondii
MBI12_g33072_MAGBIO Magnolia biondii
MBI12_g35199_MAGBIO Magnolia biondii
MBI12_g44852_MAGBIO Magnolia biondii
MCO16G505 Micromonas commoda
MD00G1051200 Malus domestica
MD12G1232500 Malus domestica
MD17G1228000 Malus domestica
Medtr6g023790 Medicago truncatula
Medtr7g115610 Medicago truncatula
MELO3C004345.2 Cucumis melo
Migut.H01121 Erythranthe guttata
MSTRG.2685 Avicennia marina
Nitab4.5_0000245g0100 Nicotiana tabacum
Nitab4.5_0010351g0020 Nicotiana tabacum
Nn2g12613 Nelumbo nucifera
Oeu028497.4 Olea europaea
Os02g0812400 Oryza sativa ssp. japonica
Peaxi162Scf00225g00424 Petunia axillaris
PGR004G0092 Punica granatum
Phvul.006G097200 Phaseolus vulgaris
Potri.005G045200 Populus trichocarpa
Pp3c1_20030 Physcomitrium patens
PRCOL_00001177 Prasinoderma coloniale
Prupe.6G335900 Prunus persica
Psat0s1551g0280 Pisum sativum
Psat0s1551g0320 Pisum sativum
Psat0s2291g0040 Pisum sativum
Psat3g029840 Pisum sativum
PSO017G5505 Papaver somniferum
PSO339G4752 Papaver somniferum
PSO541G4045 Papaver somniferum
PSO675G1731 Papaver somniferum
PSO675G6749 Papaver somniferum
QL03p001164 Quercus lobata
RcHm_v2.0_Chr2g0129391 Rosa chinensis
RcHm_v2.0_Chr4g0430791 Rosa chinensis
RcHm_v2.0_Chr6g0273391 Rosa chinensis
Rhsim03G0245100 Rhododendron simsii
Sabra16G0314400 Salix brachista
Sabra16G0314500 Salix brachista
Sabra19G0021200 Salix brachista
SalBow6G4600 Salvia bowleyana
Sc16g0010400 Simmondsia chinensis
Sed0004488 Sechium edule
SEGI_02151 Sequoiadendron giganteum
SEGI_02297 Sequoiadendron giganteum
SEGI_03238 Sequoiadendron giganteum
SEGI_16626 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25752 Striga asiatica
SHI18259 Sapria himalayana
SHI18260 Sapria himalayana
SHI18261 Sapria himalayana
SHI18262 Sapria himalayana
SMO356G0330 Selaginella moellendorffii
Solyc01g098180.3 Solanum lycopersicum
Sopen01g041760 Solanum pennellii
Sp4g17260 Schrenkiella parvula
TAR365G0486 Trochodendron aralioides
THA.LOC104805832 Tarenaya hassleriana
Thecc.05G254300 Theobroma cacao
Thhalv10016297m.g Eutrema salsugineum
TPR.G20882 Trifolium pratense
TPR.G28883 Trifolium pratense
TPR.G28885 Trifolium pratense
TPR.G33341 Trifolium pratense
TPR.G33351 Trifolium pratense
TWI12G1275 Tripterygium wilfordii
TWI56G0710 Tripterygium wilfordii
unitig_748.g8566 Utricularia gibba
vmacro06192 Vaccinium macrocarpon
VMungo0540G0740 Vigna mungo
Zm00001eb258570 Zea mays

User provided reference genes

Program Settings