Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p09890 Brassica napus
A01p32880 Brassica napus
A03p19500 Brassica napus
A03p50800 Brassica napus
A05p10510 Brassica napus
A06p35780 Brassica napus
Aa31LG6G560 Aethionema arabicum
Aa31LG9G15290 Aethionema arabicum
Aa31sc185G30 Aethionema arabicum
Aa31sc618G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3803 Anthoceros agrestis
Actinidia25961 Actinidia chinensis
Actinidia28172 Actinidia chinensis
Ah.12g054990 Amaranthus hybridus
AL4G31300 Arabidopsis lyrata
AL716U10010 Arabidopsis lyrata
AL7G36690 Arabidopsis lyrata
Aqoxy3G02384 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3C7WBJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.482M5A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4R7L3N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7CR4HZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AE9Z3E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B3D4NA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BQ9W36 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E125G1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G7H05W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H82JQN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JI8VIY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K2V32T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L0EJKI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N7TZ1S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NR0HVE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RCE8PR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U1DJ88 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WRTU1C Arachis hypogaea
AT2G35260 Arabidopsis thaliana
AT4G17840 Arabidopsis thaliana
ATR0049G040 Amborella trichopoda
Atru.chr6.1717 Acer truncatum
AUR62007285 Chenopodium quinoa
AUR62018721 Chenopodium quinoa
BcaB02g09465 Brassica carinata
BcaC01g05734 Brassica carinata
BcaC02g11630 Brassica carinata
BcaC09g51598 Brassica carinata
BcaNung00052 Brassica carinata
BolC1t01127H Brassica oleracea
BolC3t14671H Brassica oleracea
BolC4t22936H Brassica oleracea
BolC7t45429H Brassica oleracea
BraA01t00933Z Brassica rapa
BraA01t03409Z Brassica rapa
BraA03t11203Z Brassica rapa
BraA03t14169Z Brassica rapa
BraA05t19989Z Brassica rapa
BraA06t26504Z Brassica rapa
BraA09t37614Z Brassica rapa
C01p11590 Brassica napus
C03p22720 Brassica napus
C04p12920 Brassica napus
C07p49190 Brassica napus
CAN.G1216.15 Capsicum annuum
CAN.G36.13 Capsicum annuum
CAN.G399.4 Capsicum annuum
CANSAT21G2618 Cannabis sativa
CARHR129420 Cardamine hirsuta
CARHR224560 Cardamine hirsuta
Carub.0004s1696 Capsella rubella
Carub.0007s2352 Capsella rubella
Ca_24652_v3 Cicer arietinum L.
CBR_g19263 Chara braunii
CBR_g56906 Chara braunii
Cc08_g02620 Coffea canephora
CDE03G0015 Ceratophyllum demersum
CDE06G0385 Ceratophyllum demersum
Cfa012429 Carpinus fangiana
Ciclev10031866m.g Citrus clementina
CiPaw.11G092700 Carya illinoinensis
CiPaw.12G063200 Carya illinoinensis
ClCG10G001730 Citrullus lanatus
COL.COLO4_17048 Corchorus olitorius
Cpa.g.sc239.7 Carica papaya
CsaV3_3G001840 Cucumis sativus L.
CSS0046330 Camellia sinensis var. sinensis
DCAR_008274 Daucus carota
Dinv25212 Davidia involucrata
Dinv28953 Davidia involucrata
Duzib084G1060 Durio zibethinus
Duzib205G1837 Durio zibethinus
ECA240G4620 Erigeron canadensis
ECA246G0968 Erigeron canadensis
EL10Ac1g01819 Beta vulgaris
EL10Ac5g12129 Beta vulgaris
Eucgr.D02191 Eucalyptus grandis
FAN04G1856 Fragaria x ananassa
FAN08G2335 Fragaria x ananassa
FAN13G1981 Fragaria x ananassa
FAN18G3415 Fragaria x ananassa
FvH4_5g21880 Fragaria vesca
Glyma.01G198500 Glycine max
Glyma.11G043400 Glycine max
Gohir.A08G156900 Gossypium hirsutum
Gohir.D08G177300 Gossypium hirsutum
Gorai.004G185700 Gossypium raimondii
GSVIVG01013166001 Vitis vinifera
HanXRQChr03g0084021 Helianthus annuus
HanXRQChr05g0153901 Helianthus annuus
Haze_08240 Corylus avellana
Hma1.2p1_0585F.1_g183700 Hydrangea macrophylla
HPP92_022140 Vanilla planifolia
HPP92_022143 Vanilla planifolia
Hund14402 Selenicereus undatus
Lalb_Chr05g0213941 Lupinus albus
Lalb_Chr16g0379111 Lupinus albus
Lj2g0014948 Lotus japonicus
Lsat_1_v5_gn_6_79560 Lactuca sativa
Manes.17G013200 Manihot esculenta
Mapoly0008s0099 Marchantia polymorpha
MD00G1220600 Malus domestica
MD06G1033000 Malus domestica
Medtr5g014430 Medicago truncatula
MELO3C013859.2 Cucumis melo
Migut.E00930 Erythranthe guttata
MSTRG.13757 Avicennia marina
Nitab4.5_0000804g0170 Nicotiana tabacum
Nitab4.5_0002539g0020 Nicotiana tabacum
Nn1g00518 Nelumbo nucifera
Nn6g33597 Nelumbo nucifera
Oeu028027.1 Olea europaea
Oeu053047.1 Olea europaea
Os03g0100030 Oryza sativa ssp. japonica
Peaxi162Scf00045g00028 Petunia axillaris
PGR031G2717 Punica granatum
PGSC0003DMG402001159 Solanum tuberosum
Phvul.002G007300 Phaseolus vulgaris
Potri.001G143400 Populus trichocarpa
Pp3c10_10980 Physcomitrium patens
Pp3c14_25270 Physcomitrium patens
Prupe.5G038500 Prunus persica
Psat2g173200 Pisum sativum
PSO063G1634 Papaver somniferum
PSO782G3668 Papaver somniferum
QL12p005624 Quercus lobata
RcHm_v2.0_Chr6g0284251 Rosa chinensis
RcHm_v2.0_Chr7g0209431 Rosa chinensis
Rhsim11G0014500 Rhododendron simsii
Sabra01G0111800 Salix brachista
Sc01g0007480 Simmondsia chinensis
Sed0006792 Sechium edule
SEGI_24472 Sequoiadendron giganteum
SGA_v2.0_scaffold54G19447 Striga asiatica
SMO356G0344 Selaginella moellendorffii
Solyc08g005010.4 Solanum lycopersicum
Sopen08g001030 Solanum pennellii
Sp4g17480 Schrenkiella parvula
Sp7g16270 Schrenkiella parvula
TAR629G2715 Trochodendron aralioides
THA.LOC104798329 Tarenaya hassleriana
THA.LOC104807951 Tarenaya hassleriana
Thecc.03G228600 Theobroma cacao
Thhalv10016805m.g Eutrema salsugineum
Thhalv10025287m.g Eutrema salsugineum
TPR.G7833 Trifolium pratense
TWI81G0459 Tripterygium wilfordii
unitig_52.g17209 Utricularia gibba
unitig_699.g19781 Utricularia gibba
unitig_744.g24311 Utricularia gibba
vmacro00332 Vaccinium macrocarpon
VMungo1215G0016 Vigna mungo
Zm00001eb426630 Zea mays

User provided reference genes

Program Settings