Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p27270 Brassica napus
A07p44270 Brassica napus
Aa31LG4G1850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3368 Anthoceros agrestis
Actinidia35425 Actinidia chinensis
Actinidia37122 Actinidia chinensis
Actinidia37123 Actinidia chinensis
Actinidia37124 Actinidia chinensis
Actinidia37125 Actinidia chinensis
AL2G39620 Arabidopsis lyrata
Aqoxy3G03661 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3YA0AF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.73CNQS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7JS6EV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.83PK1U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K8XNS5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PZB3A5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R5WWIH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TP987Q Arachis hypogaea
AT1G79150 Arabidopsis thaliana
ATR0763G063 Amborella trichopoda
Atru.chr1.122 Acer truncatum
AUR62016815 Chenopodium quinoa
AUR62026892 Chenopodium quinoa
BcaB02g07203 Brassica carinata
BcaB02g08669 Brassica carinata
BcaC08g45374 Brassica carinata
BcaC08g47477 Brassica carinata
BcaNung04898 Brassica carinata
BolC6t38166H Brassica oleracea
BolC6t40319H Brassica oleracea
BraA07t30370Z Brassica rapa
BraA07t31936Z Brassica rapa
C06p30050 Brassica napus
C06p53020 Brassica napus
CAN.G101.16 Capsicum annuum
CAN.G101.17 Capsicum annuum
CAN.G851.30 Capsicum annuum
CANSAT80G2562 Cannabis sativa
CARHR072800 Cardamine hirsuta
Carub.0002s2602 Capsella rubella
Ca_07696_v3 Cicer arietinum L.
CBR_g30814 Chara braunii
Cc05_g16260 Coffea canephora
CDE01G0334 Ceratophyllum demersum
Cfa005512 Carpinus fangiana
Cfa022337 Carpinus fangiana
Ciclev10004308m.g Citrus clementina
CiPaw.11G063100 Carya illinoinensis
ClCG09G022650 Citrullus lanatus
COL.COLO4_07946 Corchorus olitorius
Cpa.g.sc2160.2 Carica papaya
Cpa.g.sc4.30 Carica papaya
Cre16.g659600 Chlamydomonas reinhardtii
CsaV3_7G022820 Cucumis sativus L.
CSS0013287 Camellia sinensis var. sinensis
DCAR_026669 Daucus carota
Dinv19600 Davidia involucrata
Duzib213G0752 Durio zibethinus
ECA232G0241 Erigeron canadensis
ECA236G4689 Erigeron canadensis
EL10Ac2g03277 Beta vulgaris
Eucgr.E01785 Eucalyptus grandis
Eucgr.F00934 Eucalyptus grandis
Eucgr.G02299 Eucalyptus grandis
FAN01G1588 Fragaria x ananassa
FAN03G1151 Fragaria x ananassa
FAN11G0738 Fragaria x ananassa
FAN11G1870 Fragaria x ananassa
FAN13G1121 Fragaria x ananassa
FAN14G4793 Fragaria x ananassa
FAN16G3313 Fragaria x ananassa
FAN21G2977 Fragaria x ananassa
FAN24G0029 Fragaria x ananassa
FAN24G0390 Fragaria x ananassa
FAN25G1415 Fragaria x ananassa
FvH4_3g15370 Fragaria vesca
FvH4_6g51840 Fragaria vesca
Glyma.10G245700 Glycine max
Glyma.11G148802 Glycine max
Glyma.12G070100 Glycine max
Gohir.A13G122400 Gossypium hirsutum
Gohir.D13G126400 Gossypium hirsutum
Gorai.013G141600 Gossypium raimondii
GSVIVG01036806001 Vitis vinifera
HanXRQChr11g0335681 Helianthus annuus
Haze_01704 Corylus avellana
Haze_01705 Corylus avellana
Haze_01706 Corylus avellana
Haze_01709 Corylus avellana
Haze_08588 Corylus avellana
Haze_13704 Corylus avellana
Hma1.2p1_0334F.1_g128560 Hydrangea macrophylla
Hma1.2p1_0334F.1_g128570 Hydrangea macrophylla
Hma1.2p1_0468F.1_g158750 Hydrangea macrophylla
HPP92_004307 Vanilla planifolia
Lalb_Chr01g0007101 Lupinus albus
Lalb_Chr03g0031641 Lupinus albus
Lj1g0019540 Lotus japonicus
Lju337C5G4 Lonicera japonica
Lsat_1_v5_gn_2_21921 Lactuca sativa
Lsat_1_v5_gn_7_110180 Lactuca sativa
Manes.14G011200 Manihot esculenta
Mapoly0001s0281 Marchantia polymorpha
MBI18_g01899_MAGBIO Magnolia biondii
MCO10G157 Micromonas commoda
MD05G1223600 Malus domestica
MD10G1205100 Malus domestica
Medtr7g070240 Medicago truncatula
MELO3C012616.2 Cucumis melo
Migut.M01537 Erythranthe guttata
MSTRG.7071 Avicennia marina
Nitab4.5_0000232g0210 Nicotiana tabacum
Nitab4.5_0005777g0060 Nicotiana tabacum
Nn5g27645 Nelumbo nucifera
Oeu051991.1 Olea europaea
Os06g0498500 Oryza sativa ssp. japonica
Peaxi162Scf00041g01738 Petunia axillaris
PGR044G0523 Punica granatum
PGR138G0002 Punica granatum
Phvul.011G073301 Phaseolus vulgaris
Phvul.011G076150 Phaseolus vulgaris
Phvul.L001640 Phaseolus vulgaris
Phvul.L001854 Phaseolus vulgaris
Phvul.L001940 Phaseolus vulgaris
Potri.005G096900 Populus trichocarpa
Pp3c3_9760 Physcomitrium patens
PRCOL_00003431 Prasinoderma coloniale
Prupe.4G136600 Prunus persica
Psat1g207400 Pisum sativum
Psat3g124440 Pisum sativum
PSO063G0010 Papaver somniferum
PSO782G4649 Papaver somniferum
QL04p079824 Quercus lobata
QL04p079914 Quercus lobata
QL04p080030 Quercus lobata
RcHm_v2.0_Chr5g0025821 Rosa chinensis
Rhsim04G0004600 Rhododendron simsii
Rhsim04G0004800 Rhododendron simsii
Rhsim04G0004900 Rhododendron simsii
Rhsim04G0123500 Rhododendron simsii
RhsimUnG0180500 Rhododendron simsii
Sabra05G0079500 Salix brachista
SalBow1G6550 Salvia bowleyana
SalBow6G0067 Salvia bowleyana
SalBow6G4089 Salvia bowleyana
SalBow7G2721 Salvia bowleyana
SalBow8G5525 Salvia bowleyana
Sc08g0008610 Simmondsia chinensis
Sed0009567 Sechium edule
SEGI_30171 Sequoiadendron giganteum
SGA_v2.0_scaffold186G40203 Striga asiatica
SHI21021 Sapria himalayana
SHI21022 Sapria himalayana
SMO169G0313 Selaginella moellendorffii
Solyc04g074090.4 Solanum lycopersicum
Sopen00g010230 Solanum pennellii
Sopen00g012990 Solanum pennellii
Sopen00g013080 Solanum pennellii
Sopen00g013090 Solanum pennellii
Sp5g34210 Schrenkiella parvula
TAR362G1264 Trochodendron aralioides
THA.LOC104808127 Tarenaya hassleriana
Thecc.07G169400 Theobroma cacao
Thhalv10018125m.g Eutrema salsugineum
TPR.G6646 Trifolium pratense
TWI38G0748 Tripterygium wilfordii
unitig_32.g11083 Utricularia gibba
unitig_32.g11084 Utricularia gibba
vmacro09775 Vaccinium macrocarpon
VMungo1127G2087 Vigna mungo
Zm00001eb020130 Zea mays

User provided reference genes

Program Settings