Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p25630 Brassica napus
A09p53690 Brassica napus
Aa31LG10G15380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.383 Anthoceros agrestis
Actinidia02806 Actinidia chinensis
Actinidia28492 Actinidia chinensis
AL5G44010 Arabidopsis lyrata
Aqoxy7G00205 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3CFA1R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4GFI35 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4K0S50 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.61RGRV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6CNS1E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6RE2SZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7SIQ0Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.89RBFC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.90L2UZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FS40WZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FXC0UE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IV9FN9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J8UMPC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K2G0UT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K31TEW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KNB6WM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LKP54T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M6ZPBG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NKMC5K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QC3BRB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T01U3X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W30CM7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WN0NDN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XMX4AZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YN12K8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YQXR17 Arachis hypogaea
AT3G61620 Arabidopsis thaliana
ATR0772G162 Amborella trichopoda
Atru.chr5.615 Acer truncatum
AUR62004446 Chenopodium quinoa
AUR62023504 Chenopodium quinoa
BcaB02g07365 Brassica carinata
BcaC07g40663 Brassica carinata
BcaC08g45143 Brassica carinata
BcaC08g45155 Brassica carinata
BolC6t37931H Brassica oleracea
BolC6t37946H Brassica oleracea
BolC8t51230H Brassica oleracea
BraA07t30204Z Brassica rapa
BraA09t40791Z Brassica rapa
C06p27620 Brassica napus
C06p27780 Brassica napus
C08p36470 Brassica napus
CAN.G986.49 Capsicum annuum
CANSAT56G4345 Cannabis sativa
CARHR171930 Cardamine hirsuta
Carub.0005s2831 Capsella rubella
Carub.0006s1683 Capsella rubella
Ca_09490_v3 Cicer arietinum L.
CBR_g46394 Chara braunii
Cc02_g38930 Coffea canephora
CDE10G0765 Ceratophyllum demersum
CDE10G0991 Ceratophyllum demersum
Cfa022832 Carpinus fangiana
Ciclev10021944m.g Citrus clementina
CiPaw.05G179000 Carya illinoinensis
CiPaw.06G050500 Carya illinoinensis
ClCG02G014060 Citrullus lanatus
COL.COLO4_27283 Corchorus olitorius
Cpa.g.sc194.16 Carica papaya
Cre06.g284500 Chlamydomonas reinhardtii
CsaV3_5G006110 Cucumis sativus L.
CSS0013339 Camellia sinensis var. sinensis
DCAR_006962 Daucus carota
Dinv32549 Davidia involucrata
Dinv43889 Davidia involucrata
Duzib138G1937 Durio zibethinus
ECA234G2549 Erigeron canadensis
EL10Ac1g00318 Beta vulgaris
Eucgr.F04376 Eucalyptus grandis
FAN07G1668 Fragaria x ananassa
FAN12G2119 Fragaria x ananassa
FAN15G2127 Fragaria x ananassa
FAN20G0802 Fragaria x ananassa
FAN24G2599 Fragaria x ananassa
FAN24G2737 Fragaria x ananassa
FvH4_2g10710 Fragaria vesca
FvH4_2g30520 Fragaria vesca
FvH4_4g15330 Fragaria vesca
Glyma.03G255200 Glycine max
Glyma.17G102000 Glycine max
Glyma.19G252800 Glycine max
Gohir.A11G094100 Gossypium hirsutum
Gohir.D11G099100 Gossypium hirsutum
Gorai.007G105300 Gossypium raimondii
GSVIVG01027043001 Vitis vinifera
HanXRQChr17g0562601 Helianthus annuus
Haze_19347 Corylus avellana
Haze_19365 Corylus avellana
Hma1.2p1_0384F.1_g140990 Hydrangea macrophylla
HPP92_009158 Vanilla planifolia
Lalb_Chr05g0217801 Lupinus albus
Lj1g0013952 Lotus japonicus
Lj9A592T69 Lonicera japonica
Lsat_1_v5_gn_4_33601 Lactuca sativa
Manes.01G249700 Manihot esculenta
Mapoly0020s0167 Marchantia polymorpha
MBI07_g20434_MAGBIO Magnolia biondii
MBI07_g20436_MAGBIO Magnolia biondii
MCO13G612 Micromonas commoda
MD01G1224600 Malus domestica
MD13G1191700 Malus domestica
MD16G1191700 Malus domestica
MD16G1191800 Malus domestica
Medtr3g072850 Medicago truncatula
Medtr7g116920 Medicago truncatula
MELO3C011748.2 Cucumis melo
Migut.B01830 Erythranthe guttata
MSTRG.20884 Avicennia marina
Nitab4.5_0000305g0180 Nicotiana tabacum
Nitab4.5_0007386g0030 Nicotiana tabacum
Nn2g12429 Nelumbo nucifera
Nn8g40347 Nelumbo nucifera
Oeu022849.2 Olea europaea
Oeu036584.1 Olea europaea
Os09g0252000 Oryza sativa ssp. japonica
Peaxi162Scf01012g00123 Petunia axillaris
Peaxi162Scf01533g00027 Petunia axillaris
PGR004G0443 Punica granatum
PGSC0003DMG400000206 Solanum tuberosum
Phvul.006G109900 Phaseolus vulgaris
Potri.014G094300 Populus trichocarpa
Pp3s48_50 Physcomitrium patens
PRCOL_00005249 Prasinoderma coloniale
Prupe.1G011800 Prunus persica
Psat3g003960 Pisum sativum
PSO063G2231 Papaver somniferum
PSO541G3611 Papaver somniferum
PSO675G5387 Papaver somniferum
PSO782G0629 Papaver somniferum
QL11p030149 Quercus lobata
RcHm_v2.0_Chr4g0416511 Rosa chinensis
RcHm_v2.0_Chr6g0268411 Rosa chinensis
RcHm_v2.0_Chr6g0271671 Rosa chinensis
RcHm_v2.0_Chr7g0217091 Rosa chinensis
Rhsim07G0007400 Rhododendron simsii
Sabra14G0068900 Salix brachista
SalBow3G2972 Salvia bowleyana
Sc01g0003000 Simmondsia chinensis
Sed0000372 Sechium edule
Sed0001564 Sechium edule
SEGI_00286 Sequoiadendron giganteum
SEGI_08389 Sequoiadendron giganteum
SGA_v2.0_scaffold548G52849 Striga asiatica
SGA_v2.0_scaffold5G02982 Striga asiatica
SHI28346 Sapria himalayana
SMO196G0022 Selaginella moellendorffii
Solyc01g095480.4 Solanum lycopersicum
Sopen01g039230 Solanum pennellii
Sp5g01790 Schrenkiella parvula
TAR375G0239 Trochodendron aralioides
TAR636G1595 Trochodendron aralioides
THA.LOC104805548 Tarenaya hassleriana
THA.LOC104817331 Tarenaya hassleriana
Thecc.01G348200 Theobroma cacao
Thhalv10006211m.g Eutrema salsugineum
TPR.G18216 Trifolium pratense
TPR.G22345 Trifolium pratense
TPR.G4745 Trifolium pratense
TWI14G0799 Tripterygium wilfordii
unitig_747.g21326 Utricularia gibba
vmacro12382 Vaccinium macrocarpon
vmacro13201 Vaccinium macrocarpon
VMungo0540G1292 Vigna mungo
Zm00001eb343390 Zea mays

User provided reference genes

Program Settings