Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p28040 Brassica napus
Aa31LG9G14160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5212 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5251 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5436 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.150 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.153 Anthoceros agrestis
Actinidia03427 Actinidia chinensis
Actinidia04780 Actinidia chinensis
Actinidia28678 Actinidia chinensis
Actinidia29493 Actinidia chinensis
Actinidia33356 Actinidia chinensis
Actinidia33635 Actinidia chinensis
Ah.05g169030 Amaranthus hybridus
AL6G42240 Arabidopsis lyrata
Aqoxy117s002 Aquilegia oxysepala
Aqoxy3G01750 Aquilegia oxysepala
AT4G08455 Arabidopsis thaliana
ATR1001G004 Amborella trichopoda
Atru.chr13.1594 Acer truncatum
AUR62007697 Chenopodium quinoa
AUR62013445 Chenopodium quinoa
BcaB01g02864 Brassica carinata
BcaC01g04773 Brassica carinata
BolC3t15703H Brassica oleracea
BraA03t12017Z Brassica rapa
C03p33900 Brassica napus
CAN.G215.13 Capsicum annuum
CANSAT56G1102 Cannabis sativa
CARHR259500 Cardamine hirsuta
Carub.0005s1381 Capsella rubella
Carub.0006s2698 Capsella rubella
Ca_16616_v3 Cicer arietinum L.
Cc10_g13590 Coffea canephora
CDE02G1310 Ceratophyllum demersum
Cfa018416 Carpinus fangiana
Ciclev10002113m.g Citrus clementina
CiPaw.15G030200 Carya illinoinensis
CiPaw.16G022200 Carya illinoinensis
ClCG09G021850 Citrullus lanatus
COL.COLO4_36870 Corchorus olitorius
Cpa.g.sc64.155 Carica papaya
CsaV3_7G022150 Cucumis sativus L.
CSS0001496 Camellia sinensis var. sinensis
DCAR_003593 Daucus carota
Dinv14706 Davidia involucrata
Dinv27260 Davidia involucrata
Duzib041G0733 Durio zibethinus
Duzib093G1312 Durio zibethinus
Duzib116G0071 Durio zibethinus
ECA248G3438 Erigeron canadensis
EL10Ac1g01369 Beta vulgaris
Eucgr.A00657 Eucalyptus grandis
Eucgr.E00983 Eucalyptus grandis
Eucgr.E00984 Eucalyptus grandis
Eucgr.E00985 Eucalyptus grandis
Eucgr.E00988 Eucalyptus grandis
Eucgr.E00992 Eucalyptus grandis
Eucgr.E00993 Eucalyptus grandis
Eucgr.E00994 Eucalyptus grandis
Eucgr.E00996 Eucalyptus grandis
Eucgr.L00413 Eucalyptus grandis
Eucgr.L00420 Eucalyptus grandis
FAN15G0925 Fragaria x ananassa
FAN15G2352 Fragaria x ananassa
FAN20G1921 Fragaria x ananassa
FAN24G2840 Fragaria x ananassa
FAN27G1067 Fragaria x ananassa
FvH4_2g28021 Fragaria vesca
Glyma.04G244900 Glycine max
Glyma.06G118200 Glycine max
Gohir.A02G070300 Gossypium hirsutum
Gohir.A05G269300 Gossypium hirsutum
Gohir.D02G077400 Gossypium hirsutum
Gohir.D05G271200 Gossypium hirsutum
Gorai.005G086900 Gossypium raimondii
Gorai.009G284100 Gossypium raimondii
GSVIVG01008796001 Vitis vinifera
HanXRQChr02g0045541 Helianthus annuus
Haze_17645 Corylus avellana
Hma1.2p1_1732F.1_g299770 Hydrangea macrophylla
HPP92_003126 Vanilla planifolia
Lalb_Chr11g0066221 Lupinus albus
Lj1g0017464 Lotus japonicus
Lj4A674G53 Lonicera japonica
Lj4C664T3 Lonicera japonica
Lj4C664T4 Lonicera japonica
Lsat_1_v5_gn_1_7940 Lactuca sativa
Manes.18G083500 Manihot esculenta
Mapoly0001s0541 Marchantia polymorpha
Mapoly0003s0140 Marchantia polymorpha
Mapoly0009s0120 Marchantia polymorpha
Mapoly0013s0053 Marchantia polymorpha
Mapoly0016s0022 Marchantia polymorpha
Mapoly0021s0088 Marchantia polymorpha
Mapoly0054s0090 Marchantia polymorpha
Mapoly0054s0091 Marchantia polymorpha
Mapoly0054s0092 Marchantia polymorpha
Mapoly0064s0008 Marchantia polymorpha
Mapoly0110s0025 Marchantia polymorpha
Mapoly0110s0026 Marchantia polymorpha
Mapoly0110s0027 Marchantia polymorpha
Mapoly0124s0031 Marchantia polymorpha
MBI06_g32174_MAGBIO Magnolia biondii
MD15G1132500 Malus domestica
MD15G1132600 Malus domestica
MD15G1132700 Malus domestica
MD15G1132800 Malus domestica
Medtr3g088660 Medicago truncatula
MELO3C015709.2 Cucumis melo
Migut.C01075 Erythranthe guttata
Migut.N03257 Erythranthe guttata
MSTRG.1405 Avicennia marina
Nitab4.5_0000005g0360 Nicotiana tabacum
Nitab4.5_0000389g0100 Nicotiana tabacum
Nn1g08941 Nelumbo nucifera
Oeu045952.1 Olea europaea
Oeu047168.1 Olea europaea
Oeu047169.1 Olea europaea
Os07g0258700 Oryza sativa ssp. japonica
Peaxi162Scf00565g00310 Petunia axillaris
PGR042G1779 Punica granatum
PGR042G2128 Punica granatum
Phvul.009G130700 Phaseolus vulgaris
Potri.002G077000 Populus trichocarpa
Potri.005G183600 Populus trichocarpa
Pp3c12_4290 Physcomitrium patens
Prupe.1G487700 Prunus persica
Prupe.1G487800 Prunus persica
Prupe.1G487900 Prunus persica
Prupe.1G488000 Prunus persica
Prupe.1G488100 Prunus persica
Prupe.1G488200 Prunus persica
Prupe.1G488300 Prunus persica
Prupe.1G488400 Prunus persica
Prupe.2G185900 Prunus persica
Prupe.2G186000 Prunus persica
Psat5g084280 Pisum sativum
PSO170G4419 Papaver somniferum
PSO528G0283 Papaver somniferum
QL09p031595 Quercus lobata
QL09p031603 Quercus lobata
QL09p032129 Quercus lobata
QL09p032138 Quercus lobata
RcHm_v2.0_Chr6g0296891 Rosa chinensis
Rhsim11G0072500 Rhododendron simsii
Sabra02G0060500 Salix brachista
Sabra05G0139000 Salix brachista
Sc15g0007490 Simmondsia chinensis
Sed0003495 Sechium edule
Sed0004108 Sechium edule
SEGI_15749 Sequoiadendron giganteum
SEGI_18640 Sequoiadendron giganteum
SEGI_23590 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08576 Striga asiatica
SGA_v2.0_scaffold28G11965 Striga asiatica
SMO009G0028 Selaginella moellendorffii
SMO174G0126 Selaginella moellendorffii
Solyc02g032510.3 Solanum lycopersicum
Sopen02g010800 Solanum pennellii
Sp6g09470 Schrenkiella parvula
Sp6g09480 Schrenkiella parvula
THA.LOC104808256 Tarenaya hassleriana
Thecc.08G134300 Theobroma cacao
Thhalv10016014m.g Eutrema salsugineum
Thhalv10023183m.g Eutrema salsugineum
Thhalv10024159m.g Eutrema salsugineum
Thhalv10028837m.g Eutrema salsugineum
Thhalv10029206m.g Eutrema salsugineum
TPR.G6334 Trifolium pratense
TWI32G1346 Tripterygium wilfordii
TWI34G1744 Tripterygium wilfordii
unitig_26.g9909 Utricularia gibba
unitig_749.g13929 Utricularia gibba
vmacro00872 Vaccinium macrocarpon
VMungo1309G1661 Vigna mungo
Zm00001eb304620 Zea mays

User provided reference genes

Program Settings