Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p23700 Brassica napus
Aa31LG6G16740 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.297 Anthoceros agrestis
Actinidia32012 Actinidia chinensis
Actinidia32073 Actinidia chinensis
Actinidia37917 Actinidia chinensis
AL7G10200 Arabidopsis lyrata
Aqoxy5G01031 Aquilegia oxysepala
Aqoxy6G01687 Aquilegia oxysepala
Aqoxy6G01688 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.13SVP6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2P21EX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.388DF8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5851ZQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BKYH70 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G18Z51 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X4XIB4 Arachis hypogaea
AT2G45250 Arabidopsis thaliana
AT4G38280 Arabidopsis thaliana
ATR0174G047 Amborella trichopoda
ATR0661G493 Amborella trichopoda
Atru.chr5.3549 Acer truncatum
AUR62011702 Chenopodium quinoa
AUR62012919 Chenopodium quinoa
BcaB03g12256 Brassica carinata
BolC3t20032H Brassica oleracea
BraA08t34322Z Brassica rapa
C03p77740 Brassica napus
CAN.G1725.8 Capsicum annuum
CAN.G311.122 Capsicum annuum
CANSAT25G1278 Cannabis sativa
CANSAT25G1327 Cannabis sativa
CARHR294070 Cardamine hirsuta
Carub.0007s0022 Capsella rubella
Ca_16692_v3 Cicer arietinum L.
Cc09_g10730 Coffea canephora
Cc10_g00590 Coffea canephora
CDE05G1352 Ceratophyllum demersum
CDE05G2511 Ceratophyllum demersum
CDE06G0218 Ceratophyllum demersum
CDE06G2177 Ceratophyllum demersum
Cfa005351 Carpinus fangiana
Cfa014094 Carpinus fangiana
Ciclev10028873m.g Citrus clementina
CiPaw.05G091700 Carya illinoinensis
CiPaw.07G137900 Carya illinoinensis
ClCG02G009960 Citrullus lanatus
ClCG08G009390 Citrullus lanatus
COL.COLO4_17933 Corchorus olitorius
Cpa.g.sc20.204 Carica papaya
CsaV3_6G010160 Cucumis sativus L.
CsaV3_6G031550 Cucumis sativus L.
CSS0036568 Camellia sinensis var. sinensis
DCAR_013923 Daucus carota
DCAR_015663 Daucus carota
DCAR_016775 Daucus carota
Dinv31951 Davidia involucrata
Duzib052G0838 Durio zibethinus
Duzib132G1231 Durio zibethinus
ECA233G2935 Erigeron canadensis
ECA233G5124 Erigeron canadensis
ECA246G4591 Erigeron canadensis
EL10Ac9g21245 Beta vulgaris
Eucgr.I01517 Eucalyptus grandis
FAN04G2017 Fragaria x ananassa
FAN08G1258 Fragaria x ananassa
FAN15G3453 Fragaria x ananassa
FAN18G0752 Fragaria x ananassa
FAN20G0177 Fragaria x ananassa
FAN24G0691 Fragaria x ananassa
FAN27G2747 Fragaria x ananassa
FvH4_2g16620 Fragaria vesca
FvH4_5g25250 Fragaria vesca
Glyma.04G000700 Glycine max
Glyma.06G000500 Glycine max
Gohir.A01G174900 Gossypium hirsutum
Gohir.A03G209600 Gossypium hirsutum
Gohir.D01G166000 Gossypium hirsutum
Gohir.D02G231300 Gossypium hirsutum
Gorai.002G206500 Gossypium raimondii
Gorai.005G258900 Gossypium raimondii
GSVIVG01009897001 Vitis vinifera
GSVIVG01023888001 Vitis vinifera
GSVIVG01026659001 Vitis vinifera
HanXRQChr12g0367561 Helianthus annuus
HanXRQChr12g0374421 Helianthus annuus
HanXRQChr13g0409731 Helianthus annuus
Haze_02016 Corylus avellana
Haze_22797 Corylus avellana
Haze_22798 Corylus avellana
Hma1.2p1_0271F.1_g108900 Hydrangea macrophylla
HPP92_020992 Vanilla planifolia
HPP92_021046 Vanilla planifolia
HPP92_025977 Vanilla planifolia
Hund06165 Selenicereus undatus
Lalb_Chr08g0246851 Lupinus albus
Lalb_Chr11g0061231 Lupinus albus
Lj1g0000413 Lotus japonicus
Lj4A806T76 Lonicera japonica
Lj5P172T81 Lonicera japonica
Lsat_1_v5_gn_3_48780 Lactuca sativa
Lsat_1_v5_gn_8_26360 Lactuca sativa
Manes.04G067300 Manihot esculenta
Mapoly0074s0020 Marchantia polymorpha
MBI08_g12714_MAGBIO Magnolia biondii
MD05G1134400 Malus domestica
MD06G1009100 Malus domestica
MD10G1139500 Malus domestica
Medtr3g118500 Medicago truncatula
MELO3C026537.2 Cucumis melo
Migut.B00012 Erythranthe guttata
Migut.N02961 Erythranthe guttata
MSTRG.16955 Avicennia marina
MSTRG.22102 Avicennia marina
MSTRG.24495 Avicennia marina
Nitab4.5_0000588g0020 Nicotiana tabacum
Nitab4.5_0000783g0190 Nicotiana tabacum
Nitab4.5_0011212g0050 Nicotiana tabacum
Nn5g30963 Nelumbo nucifera
Nn6g31719 Nelumbo nucifera
Oeu003435.2 Olea europaea
Oeu033835.1 Olea europaea
Oeu046353.1 Olea europaea
Oeu053875.1 Olea europaea
Os04g0136900 Oryza sativa ssp. japonica
Os09g0549400 Oryza sativa ssp. japonica
Peaxi162Scf00362g00245 Petunia axillaris
Peaxi162Scf00711g00414 Petunia axillaris
PGR142G1962 Punica granatum
PGSC0003DMG400009905 Solanum tuberosum
PGSC0003DMG400014661 Solanum tuberosum
Phvul.006G042500 Phaseolus vulgaris
Potri.004G205200 Populus trichocarpa
Potri.009G166100 Populus trichocarpa
Pp3c19_6980 Physcomitrium patens
Prupe.5G011500 Prunus persica
Prupe.8G178200 Prunus persica
Psat5g000520 Pisum sativum
PSO541G3051 Papaver somniferum
PSO675G5999 Papaver somniferum
QL02p014402 Quercus lobata
QL11p055606 Quercus lobata
QL11p055907 Quercus lobata
RcHm_v2.0_Chr6g0280681 Rosa chinensis
RcHm_v2.0_Chr7g0215391 Rosa chinensis
Rhsim05G0047600 Rhododendron simsii
Rhsim07G0256300 Rhododendron simsii
Sabra04G0138500 Salix brachista
SalBow1G5464 Salvia bowleyana
SalBow6G3106 Salvia bowleyana
Sc18g0006030 Simmondsia chinensis
Sed0010938 Sechium edule
Sed0014450 Sechium edule
SEGI_28645 Sequoiadendron giganteum
SEGI_41193 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13344 Striga asiatica
SGA_v2.0_scaffold364G49977 Striga asiatica
SGA_v2.0_scaffold58G20314 Striga asiatica
SMO347G0358 Selaginella moellendorffii
Solyc01g112180.4 Solanum lycopersicum
Solyc04g082450.3 Solanum lycopersicum
Sopen01g054230 Solanum pennellii
Sopen04g036060 Solanum pennellii
Sp7g37440 Schrenkiella parvula
TAR381G0291 Trochodendron aralioides
TAR625G1504 Trochodendron aralioides
Thecc.02G044800 Theobroma cacao
Thhalv10026442m.g Eutrema salsugineum
TPR.G38537 Trifolium pratense
TWI75G1612 Tripterygium wilfordii
TWI79G1491 Tripterygium wilfordii
vmacro04409 Vaccinium macrocarpon
vmacro08750 Vaccinium macrocarpon
vmacro17300 Vaccinium macrocarpon
VMungo0540G0354 Vigna mungo
Zm00001eb104250 Zea mays
Zm00001eb420050 Zea mays

User provided reference genes

Program Settings