Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p35650 Brassica napus
A08p10650 Brassica napus
A08p10660 Brassica napus
A08p28590 Brassica napus
Aa31LG10G17420 Aethionema arabicum
Aa31LG5G18640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3645 Anthoceros agrestis
Actinidia24671 Actinidia chinensis
Actinidia31057 Actinidia chinensis
Actinidia36714 Actinidia chinensis
AL3G19480 Arabidopsis lyrata
AL5G46410 Arabidopsis lyrata
Aqoxy2G00138 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3CZ6TN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HIY6S0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LBVL0K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NHZH5I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YQ2HRW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z50281 Arachis hypogaea
AT3G08505 Arabidopsis thaliana
ATR0605G260 Amborella trichopoda
Atru.chr11.2647 Acer truncatum
AUR62009376 Chenopodium quinoa
AUR62023057 Chenopodium quinoa
BcaB03g11569 Brassica carinata
BcaB04g21254 Brassica carinata
BcaC01g04265 Brassica carinata
BcaC07g37767 Brassica carinata
BcaC07g39147 Brassica carinata
BcaC09g47976 Brassica carinata
BolC3t16599H Brassica oleracea
BolC8t48153H Brassica oleracea
BolC8t48154H Brassica oleracea
BolC8t49779H Brassica oleracea
BolC8t49780H Brassica oleracea
BraA01t04343Z Brassica rapa
BraA03t12740Z Brassica rapa
BraA08t33064Z Brassica rapa
BraA08t34788Z Brassica rapa
C03p43290 Brassica napus
C08p21400 Brassica napus
C08p21410 Brassica napus
CAN.G709.1 Capsicum annuum
CARHR082810 Cardamine hirsuta
CARHR291420 Cardamine hirsuta
Carub.0003s0765 Capsella rubella
Carub.0005s3016 Capsella rubella
Ca_14370_v3 Cicer arietinum L.
Ca_27172_v3 Cicer arietinum L.
Cc02_g27780 Coffea canephora
Cc02_g27790 Coffea canephora
CDE04G0006 Ceratophyllum demersum
Ciclev10031666m.g Citrus clementina
ClCG09G004250 Citrullus lanatus
COL.COLO4_23923 Corchorus olitorius
Cpa.g.c29767.2 Carica papaya
Cre06.g278136 Chlamydomonas reinhardtii
CsaV3_7G031170 Cucumis sativus L.
CSS0030964 Camellia sinensis var. sinensis
DCAR_003208 Daucus carota
DCAR_022405 Daucus carota
Dinv43454 Davidia involucrata
ECA248G0446 Erigeron canadensis
EL10Ac2g04315 Beta vulgaris
Eucgr.J01264 Eucalyptus grandis
FAN01G3017 Fragaria x ananassa
FAN03G2194 Fragaria x ananassa
FAN06G2354 Fragaria x ananassa
FAN10G2408 Fragaria x ananassa
FvH4_7g00890 Fragaria vesca
Glyma.08G153800 Glycine max
Glyma.08G154100 Glycine max
Glyma.15G272400 Glycine max
Glyma.15G273000 Glycine max
Gohir.A08G027700 Gossypium hirsutum
Gohir.A08G145200 Gossypium hirsutum
Gohir.D08G038400 Gossypium hirsutum
Gohir.D08G166100 Gossypium hirsutum
Gorai.004G036900 Gossypium raimondii
Gorai.004G173300 Gossypium raimondii
GSVIVG01032073001 Vitis vinifera
HanXRQChr01g0016141 Helianthus annuus
Haze_03212 Corylus avellana
HPP92_005768 Vanilla planifolia
Hund03665 Selenicereus undatus
Lalb_Chr01g0015291 Lupinus albus
Lalb_Chr01g0015331 Lupinus albus
Lalb_Chr20g0108061 Lupinus albus
Lj3g0002246 Lotus japonicus
Lj3g0003225 Lotus japonicus
Lj7A569G59 Lonicera japonica
Lj9C630T11 Lonicera japonica
Lsat_1_v5_gn_1_107981 Lactuca sativa
Manes.07G005000 Manihot esculenta
Manes.10G144700 Manihot esculenta
Mapoly0042s0020 Marchantia polymorpha
MBI04_g13623_MAGBIO Magnolia biondii
MBI17_g06171_MAGBIO Magnolia biondii
MD02G1313900 Malus domestica
MD07G1008500 Malus domestica
Medtr3g028170 Medicago truncatula
Medtr3g028190 Medicago truncatula
MELO3C023541.2 Cucumis melo
Migut.N01471 Erythranthe guttata
MSTRG.20593 Avicennia marina
MSTRG.5016 Avicennia marina
Nitab4.5_0000254g0170 Nicotiana tabacum
Nitab4.5_0000634g0100 Nicotiana tabacum
Nitab4.5_0001299g0010 Nicotiana tabacum
Nitab4.5_0003190g0010 Nicotiana tabacum
Nitab4.5_0004786g0010 Nicotiana tabacum
Nitab4.5_0011837g0010 Nicotiana tabacum
Nn2g15431 Nelumbo nucifera
Nn7g36164 Nelumbo nucifera
Oeu039134.1 Olea europaea
Peaxi162Scf00148g00610 Petunia axillaris
Peaxi162Scf00407g00639 Petunia axillaris
Peaxi162Scf00428g00618 Petunia axillaris
PGR044G2195 Punica granatum
PGR044G2672 Punica granatum
Phvul.005G019900 Phaseolus vulgaris
Phvul.005G020000 Phaseolus vulgaris
Phvul.011G110100 Phaseolus vulgaris
Potri.001G268200 Populus trichocarpa
Potri.004G134400 Populus trichocarpa
Potri.009G062600 Populus trichocarpa
Pp3c5_25680 Physcomitrium patens
PRCOL_00005356 Prasinoderma coloniale
Prupe.2G011700 Prunus persica
Psat5g204200 Pisum sativum
Psat5g204240 Pisum sativum
PSO339G5616 Papaver somniferum
PSO384G3532 Papaver somniferum
QL04p005704 Quercus lobata
QL04p007133 Quercus lobata
QL04p032014 Quercus lobata
QL04p032319 Quercus lobata
QL93p2025_0050 Quercus lobata
RcHm_v2.0_Chr1g0315781 Rosa chinensis
Rhsim07G0054700 Rhododendron simsii
Sabra04G0083700 Salix brachista
Sabra09G0046300 Salix brachista
Sabra16G0164300 Salix brachista
SalBow5G4770 Salvia bowleyana
Sc10g0000010 Simmondsia chinensis
Sed0011667 Sechium edule
SEGI_34678 Sequoiadendron giganteum
SGA_v2.0_scaffold167G38446 Striga asiatica
SGA_v2.0_scaffold24G10678 Striga asiatica
SMO203G0166 Selaginella moellendorffii
SMO203G0245 Selaginella moellendorffii
Solyc01g087030.3 Solanum lycopersicum
Solyc10g038000.3 Solanum lycopersicum
Sopen01g034110 Solanum pennellii
Sopen10g011530 Solanum pennellii
Sp1g00020 Schrenkiella parvula
Sp3g06990 Schrenkiella parvula
Sp5g00030 Schrenkiella parvula
TAR369G0176 Trochodendron aralioides
TAR633G1074 Trochodendron aralioides
THA.LOC104819067 Tarenaya hassleriana
THA.LOC104827426 Tarenaya hassleriana
Thecc.01G412100 Theobroma cacao
Thhalv10010518m.g Eutrema salsugineum
Thhalv10021103m.g Eutrema salsugineum
Thhalv10023829m.g Eutrema salsugineum
TPR.G12140 Trifolium pratense
TPR.G12281 Trifolium pratense
TWI53G1741 Tripterygium wilfordii
TWI73G0359 Tripterygium wilfordii
unitig_26.g8826 Utricularia gibba
unitig_85.g27216 Utricularia gibba
vmacro08182 Vaccinium macrocarpon
vmacro13655 Vaccinium macrocarpon
VMungo1080G0709 Vigna mungo
VMungo1080G1751 Vigna mungo
Zm00001eb252860 Zea mays
Zm00001eb381600 Zea mays

User provided reference genes

Program Settings