Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p31980 Brassica napus
A09p00040 Brassica napus
Aa31LG5G720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5530 Anthoceros agrestis
Actinidia02826 Actinidia chinensis
AL6G52080 Arabidopsis lyrata
Aqoxy5G04080 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9YV9D4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P1PLPP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U13Q33 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W45FS6 Arachis hypogaea
AT4G01320 Arabidopsis thaliana
ATR0661G289 Amborella trichopoda
ATR0763G219 Amborella trichopoda
Atru.chr12.614 Acer truncatum
Atru.chr5.1381 Acer truncatum
Atru.chr5.547 Acer truncatum
AUR62004399 Chenopodium quinoa
AUR62022605 Chenopodium quinoa
BcaB01g02153 Brassica carinata
BcaB01g02281 Brassica carinata
BcaC01g06856 Brassica carinata
BcaC03g16052 Brassica carinata
BcaC04g24142 Brassica carinata
BolC3t16172H Brassica oleracea
BolC9t53000H Brassica oleracea
BraA03t12370Z Brassica rapa
BraA09t35735Z Brassica rapa
C03p39000 Brassica napus
C09p00660 Brassica napus
CAN.G78.110 Capsicum annuum
CANSAT25G0211 Cannabis sativa
CANSAT25G3593 Cannabis sativa
CANSAT56G2934 Cannabis sativa
CARHR249000 Cardamine hirsuta
Carub.0006s3638 Capsella rubella
Ca_00820_v3 Cicer arietinum L.
CBR_g23782 Chara braunii
Cc02_g38410 Coffea canephora
CDE09G0314 Ceratophyllum demersum
CDE11G0931 Ceratophyllum demersum
Cfa003885 Carpinus fangiana
Ciclev10020054m.g Citrus clementina
CiPaw.01G065300 Carya illinoinensis
ClCG05G001330 Citrullus lanatus
COL.COLO4_12761 Corchorus olitorius
Cpa.g.sc184.22 Carica papaya
Cre07.g356150 Chlamydomonas reinhardtii
CsaV3_3G008710 Cucumis sativus L.
CSS0029735 Camellia sinensis var. sinensis
DCAR_008629 Daucus carota
DCAR_025211 Daucus carota
Dinv32510 Davidia involucrata
Dinv43851 Davidia involucrata
Duzib133G1387 Durio zibethinus
Duzib138G0396 Durio zibethinus
ECA234G3268 Erigeron canadensis
EL10Ac1g00369 Beta vulgaris
Eucgr.D02317 Eucalyptus grandis
FAN01G0997 Fragaria x ananassa
FAN01G2116 Fragaria x ananassa
FAN03G0710 Fragaria x ananassa
FAN03G1748 Fragaria x ananassa
FAN06G0785 Fragaria x ananassa
FAN06G3510 Fragaria x ananassa
FAN06G4494 Fragaria x ananassa
FAN06G4922 Fragaria x ananassa
FAN10G0014 Fragaria x ananassa
FAN10G1372 Fragaria x ananassa
FAN10G2219 Fragaria x ananassa
FAN10G2623 Fragaria x ananassa
FAN10G3432 Fragaria x ananassa
FAN10G3576 Fragaria x ananassa
FvH4_7g15081 Fragaria vesca
FvH4_7g15083 Fragaria vesca
FvH4_7g15084 Fragaria vesca
Glyma.09G255600 Glycine max
Glyma.18G237300 Glycine max
Gohir.A11G091500 Gossypium hirsutum
Gohir.A13G099905 Gossypium hirsutum
Gohir.D11G096200 Gossypium hirsutum
Gorai.007G102500 Gossypium raimondii
GSVIVG01026981001 Vitis vinifera
HanXRQChr14g0436691 Helianthus annuus
HanXRQChr16g0521851 Helianthus annuus
HanXRQChr16g0521861 Helianthus annuus
HanXRQChr17g0562361 Helianthus annuus
Haze_15549 Corylus avellana
Haze_26886 Corylus avellana
Hma1.2p1_0456F.1_g156440 Hydrangea macrophylla
Hma1.2p1_0627F.1_g191710 Hydrangea macrophylla
HPP92_022235 Vanilla planifolia
Hund16669 Selenicereus undatus
Hund27252 Selenicereus undatus
Lalb_Chr04g0259201 Lupinus albus
Lj1g0024026 Lotus japonicus
Lj9C587T13 Lonicera japonica
Lsat_1_v5_gn_2_83340 Lactuca sativa
Lsat_1_v5_gn_3_43021 Lactuca sativa
Lsat_1_v5_gn_4_34641 Lactuca sativa
Lsat_1_v5_gn_8_143621 Lactuca sativa
Lsat_1_v5_gn_8_14540 Lactuca sativa
Manes.05G031000 Manihot esculenta
Mapoly0151s0045 Marchantia polymorpha
Mapoly1163s0001 Marchantia polymorpha
MBI04_g26959_MAGBIO Magnolia biondii
MBI05_g47549_MAGBIO Magnolia biondii
MBI19_g13733_MAGBIO Magnolia biondii
MD01G1069400 Malus domestica
Medtr4g065940 Medicago truncatula
Medtr7g078760 Medicago truncatula
Medtr8g028680 Medicago truncatula
MELO3C006089.2 Cucumis melo
Migut.N01455 Erythranthe guttata
MSTRG.28227 Avicennia marina
MSTRG.4846 Avicennia marina
Nitab4.5_0001269g0010 Nicotiana tabacum
Nitab4.5_0001702g0130 Nicotiana tabacum
Nitab4.5_0003779g0180 Nicotiana tabacum
Nitab4.5_0011900g0010 Nicotiana tabacum
Nn1g01640 Nelumbo nucifera
Oeu015226.2 Olea europaea
Oeu036597.2 Olea europaea
Os02g0680400 Oryza sativa ssp. japonica
Peaxi162Scf00020g01122 Petunia axillaris
PGR042G1058 Punica granatum
Phvul.008G059300 Phaseolus vulgaris
Potri.002G162700 Populus trichocarpa
Potri.014G088900 Populus trichocarpa
Pp3c12_25070 Physcomitrium patens
Pp3c4_3300 Physcomitrium patens
PRCOL_00003828 Prasinoderma coloniale
Prupe.2G175500 Prunus persica
Psat1g001760 Pisum sativum
Psat2g071920 Pisum sativum
Psat2g071960 Pisum sativum
Psat3g106680 Pisum sativum
Psat5g164800 Pisum sativum
PSO478G2530 Papaver somniferum
PSO782G0912 Papaver somniferum
QL04p055042 Quercus lobata
QL12p031965 Quercus lobata
RcHm_v2.0_Chr1g0357201 Rosa chinensis
RcHm_v2.0_Chr1g0357211 Rosa chinensis
RcHm_v2.0_Chr1g0357221 Rosa chinensis
RcHm_v2.0_Chr1g0357271 Rosa chinensis
RcHm_v2.0_Chr1g0362391 Rosa chinensis
RcHm_v2.0_Chr2g0131551 Rosa chinensis
RcHm_v2.0_Chr3g0493601 Rosa chinensis
Sabra02G0147800 Salix brachista
Sabra02G0148200 Salix brachista
Sabra14G0064600 Salix brachista
SalBow5G1235 Salvia bowleyana
SalBow5G2471 Salvia bowleyana
Sc26g0000820 Simmondsia chinensis
Sed0007018 Sechium edule
Sed0024082 Sechium edule
SEGI_36957 Sequoiadendron giganteum
SGA_v2.0_scaffold190G40413 Striga asiatica
SGA_v2.0_scaffold43G16402 Striga asiatica
SMO364G0773 Selaginella moellendorffii
Solyc01g094930.3 Solanum lycopersicum
Sopen01g038710 Solanum pennellii
Sp6g00820 Schrenkiella parvula
TAR375G0471 Trochodendron aralioides
TAR629G0433 Trochodendron aralioides
TAR636G3069 Trochodendron aralioides
THA.LOC104817033 Tarenaya hassleriana
THA.LOC104825858 Tarenaya hassleriana
Thecc.01G354200 Theobroma cacao
Thhalv10028603m.g Eutrema salsugineum
TPR.G22298 Trifolium pratense
TWI59G0695 Tripterygium wilfordii
vmacro04325 Vaccinium macrocarpon
vmacro05290 Vaccinium macrocarpon
vmacro05291 Vaccinium macrocarpon
vmacro05292 Vaccinium macrocarpon
vmacro20904 Vaccinium macrocarpon
VMungo1383G0817 Vigna mungo
Zm00001eb187240 Zea mays

User provided reference genes

Program Settings