Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p25090 Brassica napus
A09p02400 Brassica napus
Aa31LG5G2610 Aethionema arabicum
Ah.04g162700 Amaranthus hybridus
AL6G49860 Arabidopsis lyrata
Aqoxy2G00575 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6HBC95 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AN8C0D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DI3WFZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E19P6N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L6Y1E3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TJRY6P Arachis hypogaea
AT4G03090 Arabidopsis thaliana
ATR0626G050 Amborella trichopoda
Atru.chr5.1297 Acer truncatum
Atru.chr5.1298 Acer truncatum
AUR62028969 Chenopodium quinoa
AUR62030161 Chenopodium quinoa
AUR62034443 Chenopodium quinoa
AUR62034492 Chenopodium quinoa
AUR62034599 Chenopodium quinoa
AUR62036671 Chenopodium quinoa
BcaB01g01939 Brassica carinata
BcaB01g01983 Brassica carinata
BcaB05g23686 Brassica carinata
BcaC03g16206 Brassica carinata
BolC2t10009H Brassica oleracea
BolC9t53180H Brassica oleracea
BraA02t07497Z Brassica rapa
BraA09t35887Z Brassica rapa
C02p39820 Brassica napus
C09p02500 Brassica napus
CAN.G426.9 Capsicum annuum
CANSAT25G1777 Cannabis sativa
CARHR251510 Cardamine hirsuta
CARHR251520 Cardamine hirsuta
Carub.0006s3397 Capsella rubella
Ca_01349_v3 Cicer arietinum L.
Ca_01352_v3 Cicer arietinum L.
Ca_19197_v3 Cicer arietinum L.
Ca_31206_v3 Cicer arietinum L.
CBR_g32447 Chara braunii
CBR_g32449 Chara braunii
Cc01_g20080 Coffea canephora
CDE05G3415 Ceratophyllum demersum
CDE11G0573 Ceratophyllum demersum
Cfa006055 Carpinus fangiana
Cfa011439 Carpinus fangiana
Ciclev10018730m.g Citrus clementina
CiPaw.08G101000 Carya illinoinensis
CiPaw.13G100200 Carya illinoinensis
ClCG03G001700 Citrullus lanatus
COL.COLO4_09853 Corchorus olitorius
Cpa.g.sc60.39 Carica papaya
CsaV3_1G033940 Cucumis sativus L.
CSS0005803 Camellia sinensis var. sinensis
CSS0019256 Camellia sinensis var. sinensis
CSS0039297 Camellia sinensis var. sinensis
CSS0041154 Camellia sinensis var. sinensis
DCAR_002782 Daucus carota
DCAR_005834 Daucus carota
Dinv11285 Davidia involucrata
Dinv32982 Davidia involucrata
Duzib170G0264 Durio zibethinus
Duzib213G0855 Durio zibethinus
Duzib268G0343 Durio zibethinus
ECA236G1413 Erigeron canadensis
EL10Ac7g17149 Beta vulgaris
Eucgr.C03805 Eucalyptus grandis
FAN15G0592 Fragaria x ananassa
FAN20G2140 Fragaria x ananassa
FAN24G2516 Fragaria x ananassa
FAN27G0529 Fragaria x ananassa
FvH4_2g24490 Fragaria vesca
FvH4_2g24530 Fragaria vesca
Glyma.13G332300 Glycine max
Glyma.15G042000 Glycine max
Gohir.A04G004900 Gossypium hirsutum
Gohir.D05G385000 Gossypium hirsutum
Gorai.009G451700 Gossypium raimondii
GSVIVG01011024001 Vitis vinifera
HanXRQChr01g0002901 Helianthus annuus
HanXRQChr01g0013141 Helianthus annuus
HanXRQChr02g0048981 Helianthus annuus
HanXRQChr05g0150041 Helianthus annuus
HanXRQChr06g0164001 Helianthus annuus
HanXRQChr09g0270771 Helianthus annuus
HanXRQChr12g0370771 Helianthus annuus
HanXRQChr12g0370811 Helianthus annuus
HanXRQChr14g0429711 Helianthus annuus
HanXRQChr14g0451841 Helianthus annuus
HanXRQChr16g0512981 Helianthus annuus
HanXRQChr16g0513531 Helianthus annuus
Haze_04796 Corylus avellana
Haze_24021 Corylus avellana
Haze_24022 Corylus avellana
Hma1.2p1_0111F.1_g053430 Hydrangea macrophylla
Hma1.2p1_0209F.1_g089230 Hydrangea macrophylla
Hma1.2p1_0358F.1_g134790 Hydrangea macrophylla
Hma1.2p1_0358F.1_g134800 Hydrangea macrophylla
Hma1.2p1_3245F.1_g334340 Hydrangea macrophylla
Hma1.2p1_3245F.1_g334350 Hydrangea macrophylla
HPP92_011330 Vanilla planifolia
HPP92_011331 Vanilla planifolia
Lalb_Chr01g0003851 Lupinus albus
Lalb_Chr22g0350011 Lupinus albus
Lalb_Chr24g0394281 Lupinus albus
Lj2A1183G17 Lonicera japonica
Lj3g0001853 Lotus japonicus
Lj3g0005082 Lotus japonicus
Lsat_1_v5_gn_5_189721 Lactuca sativa
Lsat_1_v5_gn_8_55721 Lactuca sativa
Manes.03G013700 Manihot esculenta
Mapoly0033s0004 Marchantia polymorpha
MBI19_g35956_MAGBIO Magnolia biondii
MD02G1277900 Malus domestica
Medtr2g096290 Medicago truncatula
Medtr4g063030 Medicago truncatula
MELO3C020662.2 Cucumis melo
MELO3C022916.2 Cucumis melo
MELO3C029664.2 Cucumis melo
MSTRG.18201 Avicennia marina
Nitab4.5_0001651g0100 Nicotiana tabacum
Nitab4.5_0010231g0010 Nicotiana tabacum
Nitab4.5_0010231g0040 Nicotiana tabacum
Nn3g21233 Nelumbo nucifera
Oeu022807.1 Olea europaea
Os05g0188600 Oryza sativa ssp. japonica
Peaxi162Scf00006g03621 Petunia axillaris
PGR044G2464 Punica granatum
Phvul.L001843 Phaseolus vulgaris
Potri.002G213400 Populus trichocarpa
Potri.014G135700 Populus trichocarpa
Pp3c15_10800 Physcomitrium patens
Pp3c9_3000 Physcomitrium patens
Prupe.8G250800 Prunus persica
Prupe.8G267900 Prunus persica
Psat5g051000 Pisum sativum
Psat5g282480 Pisum sativum
Psat7g219280 Pisum sativum
PSO170G6480 Papaver somniferum
PSO407G0030 Papaver somniferum
QL01p033546 Quercus lobata
QL01p033556 Quercus lobata
QL05p076992 Quercus lobata
QL05p076995 Quercus lobata
QL12p023448 Quercus lobata
QL12p023490 Quercus lobata
QL12p023546 Quercus lobata
QL93p2003_0013 Quercus lobata
RcHm_v2.0_Chr6g0292351 Rosa chinensis
Rhsim13G0018500 Rhododendron simsii
Sabra02G0149300 Salix brachista
Sabra14G0102100 Salix brachista
SalBow3G1663 Salvia bowleyana
Sc17g0003660 Simmondsia chinensis
Sc17g0003670 Simmondsia chinensis
Sc17g0003680 Simmondsia chinensis
Sed0013189 Sechium edule
SEGI_02434 Sequoiadendron giganteum
SEGI_15323 Sequoiadendron giganteum
SEGI_20946 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00428 Striga asiatica
SHI14627 Sapria himalayana
SMO271G0139 Selaginella moellendorffii
Solyc09g074330.3 Solanum lycopersicum
Sopen09g029170 Solanum pennellii
Sp6g03120 Schrenkiella parvula
TAR365G1186 Trochodendron aralioides
THA.LOC104801203 Tarenaya hassleriana
Thecc.07G010400 Theobroma cacao
Thhalv10026909m.g Eutrema salsugineum
Thhalv10028409m.g Eutrema salsugineum
TPR.G1039 Trifolium pratense
TPR.G163 Trifolium pratense
TPR.G34304 Trifolium pratense
TPR.G34306 Trifolium pratense
TPR.G40473 Trifolium pratense
TPR.G7485 Trifolium pratense
TWI59G0316 Tripterygium wilfordii
unitig_0.g1186 Utricularia gibba
vmacro02517 Vaccinium macrocarpon
VMungo1080G0322 Vigna mungo
Zm00001eb115510 Zea mays
Zm00001eb115530 Zea mays
Zm00001eb115560 Zea mays
Zm00001eb115580 Zea mays
Zm00001eb115600 Zea mays
Zm00001eb165880 Zea mays

User provided reference genes

Program Settings