Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p11600 Brassica napus
A10p10270 Brassica napus
A10p29890 Brassica napus
Aa31LG3G9060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4930 Anthoceros agrestis
Ah.10g038660 Amaranthus hybridus
AL8G27260 Arabidopsis lyrata
Aqoxy2G00153 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F9F3MK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GAUK41 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V59V4E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZXEF1Z Arachis hypogaea
AT5G52820 Arabidopsis thaliana
ATR0626G036 Amborella trichopoda
Atru.chr11.2590 Acer truncatum
AUR62009405 Chenopodium quinoa
AUR62023088 Chenopodium quinoa
AUR62029807 Chenopodium quinoa
AUR62034729 Chenopodium quinoa
BcaB05g21983 Brassica carinata
BcaB08g35635 Brassica carinata
BcaC01g02187 Brassica carinata
BcaC03g14497 Brassica carinata
BcaC04g20537 Brassica carinata
BcaC06g32566 Brassica carinata
BcaC06g33525 Brassica carinata
BcaC06g33533 Brassica carinata
BcaNung04664 Brassica carinata
BcaNung04849 Brassica carinata
BcaNung04851 Brassica carinata
BcaNung05838 Brassica carinata
BolC2t06237H Brassica oleracea
BolC2t07520H Brassica oleracea
BolC2t08070H Brassica oleracea
BolC7t45366H Brassica oleracea
BolC9t57120H Brassica oleracea
BolC9t57121H Brassica oleracea
BolC9t59770H Brassica oleracea
BolSC21t60295H Brassica oleracea
BraA02t06222Z Brassica rapa
BraA10t43107Z Brassica rapa
BraA10t45027Z Brassica rapa
BraA10t45028Z Brassica rapa
C02p14020 Brassica napus
C02p19350 Brassica napus
C03p42670 Brassica napus
C03p67300 Brassica napus
C07p48580 Brassica napus
C09p42400 Brassica napus
C09p42410 Brassica napus
C09p70260 Brassica napus
CAN.G338.7 Capsicum annuum
CANSAT01G2566 Cannabis sativa
CANSAT51G0014 Cannabis sativa
CARHR265750 Cardamine hirsuta
Carub.0008s1298 Capsella rubella
Ca_19553_v3 Cicer arietinum L.
Ca_22822_v3 Cicer arietinum L.
Ca_27678_v3 Cicer arietinum L.
CBR_g38286 Chara braunii
Cc02_g29020 Coffea canephora
CDE02G3858 Ceratophyllum demersum
Cfa010803 Carpinus fangiana
Cfa026891 Carpinus fangiana
Ciclev10015115m.g Citrus clementina
CiPaw.05G024300 Carya illinoinensis
CiPaw.05G162700 Carya illinoinensis
ClCG10G012220 Citrullus lanatus
COL.COLO4_04879 Corchorus olitorius
COL.COLO4_04880 Corchorus olitorius
COL.COLO4_24393 Corchorus olitorius
Cpa.g.sc19.249 Carica papaya
Cre01.g000600 Chlamydomonas reinhardtii
CsaV3_3G031990 Cucumis sativus L.
CSS0009074 Camellia sinensis var. sinensis
CSS0009389 Camellia sinensis var. sinensis
CSS0037126 Camellia sinensis var. sinensis
CSS0037178 Camellia sinensis var. sinensis
CSS0038697 Camellia sinensis var. sinensis
CSS0046585 Camellia sinensis var. sinensis
DCAR_003761 Daucus carota
Dinv09318 Davidia involucrata
Dinv43413 Davidia involucrata
Duzib138G0203 Durio zibethinus
ECA234G3512 Erigeron canadensis
Eucgr.G03346 Eucalyptus grandis
Eucgr.G03354 Eucalyptus grandis
Eucgr.G03357 Eucalyptus grandis
FAN01G0800 Fragaria x ananassa
FAN03G2659 Fragaria x ananassa
FAN06G2132 Fragaria x ananassa
FAN10G3084 Fragaria x ananassa
FvH4_7g01500 Fragaria vesca
Glyma.02G080600 Glycine max
Glyma.16G165100 Glycine max
Gohir.A08G142700 Gossypium hirsutum
Gohir.D08G163700 Gossypium hirsutum
Gorai.004G170600 Gossypium raimondii
GSVIVG01027293001 Vitis vinifera
GSVIVG01032166001 Vitis vinifera
GSVIVG01032170001 Vitis vinifera
HanXRQChr13g0400321 Helianthus annuus
HanXRQChr15g0491881 Helianthus annuus
HanXRQChr16g0524861 Helianthus annuus
HanXRQChr17g0563081 Helianthus annuus
Haze_03155 Corylus avellana
Haze_26363 Corylus avellana
HPP92_026819 Vanilla planifolia
Hund00228 Selenicereus undatus
Hund00229 Selenicereus undatus
Hund21610 Selenicereus undatus
Lalb_Chr21g0315701 Lupinus albus
Lj3A990T71 Lonicera japonica
Lj5g0022697 Lotus japonicus
Lsat_1_v5_gn_4_31941 Lactuca sativa
Manes.07G008500 Manihot esculenta
Manes.07G009860 Manihot esculenta
Manes.10G139000 Manihot esculenta
Mapoly0082s0085 Marchantia polymorpha
MCO05G213 Micromonas commoda
MD02G1305600 Malus domestica
MD09G1280600 Malus domestica
MD09G1280700 Malus domestica
MD17G1287700 Malus domestica
Medtr0421s0030 Medicago truncatula
Medtr1g054300 Medicago truncatula
MELO3C023992.2 Cucumis melo
Migut.D00412 Erythranthe guttata
MSTRG.2635 Avicennia marina
Nitab4.5_0001284g0090 Nicotiana tabacum
Nitab4.5_0012005g0010 Nicotiana tabacum
Nn1g06073 Nelumbo nucifera
Nn2g11157 Nelumbo nucifera
Nn5g28763 Nelumbo nucifera
Oeu001150.1 Olea europaea
Oeu025828.1 Olea europaea
Oeu060950.1 Olea europaea
Oeu060951.1 Olea europaea
Os10g0104500 Oryza sativa ssp. japonica
Os11g0594200 Oryza sativa ssp. japonica
Peaxi162Scf00089g01530 Petunia axillaris
PGR031G1688 Punica granatum
PGSC0003DMG400018107 Solanum tuberosum
Phvul.002G271600 Phaseolus vulgaris
Phvul.004G092500 Phaseolus vulgaris
Potri.009G058000 Populus trichocarpa
Pp3c1_35350 Physcomitrium patens
PRCOL_00003575 Prasinoderma coloniale
Prupe.2G020500 Prunus persica
Psat6g110240 Pisum sativum
PSO541G2647 Papaver somniferum
PSO541G4704 Papaver somniferum
PSO675G6796 Papaver somniferum
QL06p005538 Quercus lobata
QL11p012377 Quercus lobata
RcHm_v2.0_Chr1g0317321 Rosa chinensis
Rhsim07G0058400 Rhododendron simsii
Sabra09G0042600 Salix brachista
SalBow4G1900 Salvia bowleyana
SalBow4G2833 Salvia bowleyana
Sc03g0002540 Simmondsia chinensis
Sc23g0005910 Simmondsia chinensis
Sed0024972 Sechium edule
SEGI_00890 Sequoiadendron giganteum
SGA_v2.0_scaffold138G35254 Striga asiatica
SGA_v2.0_scaffold1G00601 Striga asiatica
SGA_v2.0_scaffold90G27689 Striga asiatica
SHI00285 Sapria himalayana
SMO259G0025 Selaginella moellendorffii
SMO259G0032 Selaginella moellendorffii
Solyc03g112530.3 Solanum lycopersicum
Sopen03g031590 Solanum pennellii
Sp6g14980 Schrenkiella parvula
TAR633G2243 Trochodendron aralioides
TAR636G2756 Trochodendron aralioides
TAR636G3369 Trochodendron aralioides
THA.LOC104819092 Tarenaya hassleriana
Thecc.01G407200 Theobroma cacao
Thhalv10013442m.g Eutrema salsugineum
Thhalv10025051m.g Eutrema salsugineum
TPR.G14490 Trifolium pratense
TPR.G39665 Trifolium pratense
TPR.G7603 Trifolium pratense
TPR.G8471 Trifolium pratense
TWI32G0899 Tripterygium wilfordii
TWI34G0860 Tripterygium wilfordii
unitig_26.g10141 Utricularia gibba
vmacro13693 Vaccinium macrocarpon
VMungo0464G1676 Vigna mungo
Zm00001eb297740 Zea mays

User provided reference genes

Program Settings