Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p24730 Brassica napus
A09p51980 Brassica napus
Aa31LG10G13950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.999 Anthoceros agrestis
Actinidia02585 Actinidia chinensis
Actinidia11443 Actinidia chinensis
Actinidia28979 Actinidia chinensis
Actinidia28980 Actinidia chinensis
Actinidia28981 Actinidia chinensis
Ah.13g073460 Amaranthus hybridus
AL5G41680 Arabidopsis lyrata
AL5G41730 Arabidopsis lyrata
Aqoxy2G04153 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CYNM9M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KL9X3Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QCV2L4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S0PZLW Arachis hypogaea
AT3G59660 Arabidopsis thaliana
ATR0743G267 Amborella trichopoda
Atru.chr4.1420 Acer truncatum
AUR62002403 Chenopodium quinoa
AUR62023792 Chenopodium quinoa
AUR62041506 Chenopodium quinoa
BcaB02g07454 Brassica carinata
BcaC07g40497 Brassica carinata
BcaC08g44999 Brassica carinata
BolC6t37794H Brassica oleracea
BolC8t51068H Brassica oleracea
BraA07t30118Z Brassica rapa
BraA09t40631Z Brassica rapa
C06p26310 Brassica napus
C08p34660 Brassica napus
CAN.G136.12 Capsicum annuum
CAN.G759.10 Capsicum annuum
CAN.G759.9 Capsicum annuum
CARHR170030 Cardamine hirsuta
Carub.0005s2638 Capsella rubella
Ca_18637_v3 Cicer arietinum L.
CBR_g46857 Chara braunii
Cc03_g14130 Coffea canephora
CDE02G2835 Ceratophyllum demersum
Cfa015269 Carpinus fangiana
Ciclev10019423m.g Citrus clementina
Ciclev10019432m.g Citrus clementina
Ciclev10019435m.g Citrus clementina
Ciclev10020241m.g Citrus clementina
CiPaw.01G170400 Carya illinoinensis
CiPaw.01G170500 Carya illinoinensis
CiPaw.02G100300 Carya illinoinensis
ClCG07G015200 Citrullus lanatus
COL.COLO4_06497 Corchorus olitorius
Cpa.g.sc9.365 Carica papaya
Cpa.g.sc9.366 Carica papaya
Cpa.g.sc9.367 Carica papaya
Cpa.g.sc9.368 Carica papaya
CsaV3_4G002790 Cucumis sativus L.
CSS0022611 Camellia sinensis var. sinensis
DCAR_005471 Daucus carota
DCAR_005472 Daucus carota
DCAR_027523 Daucus carota
Dinv07056 Davidia involucrata
Dinv33206 Davidia involucrata
Duzib151G0128 Durio zibethinus
Duzib212G0814 Durio zibethinus
Duzib268G0130 Durio zibethinus
ECA248G0552 Erigeron canadensis
EL10Ac3g06090 Beta vulgaris
Eucgr.L00003 Eucalyptus grandis
FAN02G4325 Fragaria x ananassa
FAN03G1615 Fragaria x ananassa
FAN03G2964 Fragaria x ananassa
FAN08G0117 Fragaria x ananassa
FAN11G3774 Fragaria x ananassa
FAN16G1590 Fragaria x ananassa
FAN21G2715 Fragaria x ananassa
FAN21G3444 Fragaria x ananassa
FAN25G3295 Fragaria x ananassa
FAN28G1517 Fragaria x ananassa
FvH4_3g33330 Fragaria vesca
Glyma.02G137500 Glycine max
Glyma.02G137700 Glycine max
Glyma.07G207700 Glycine max
Glyma.07G207902 Glycine max
Gohir.A02G009800 Gossypium hirsutum
Gohir.A10G143900 Gossypium hirsutum
Gohir.D02G010000 Gossypium hirsutum
Gohir.D10G123100 Gossypium hirsutum
Gorai.005G012300 Gossypium raimondii
Gorai.011G135600 Gossypium raimondii
GSVIVG01038144001 Vitis vinifera
HanXRQChr02g0059151 Helianthus annuus
HanXRQChr08g0224081 Helianthus annuus
HanXRQChr11g0343141 Helianthus annuus
HanXRQChr15g0474821 Helianthus annuus
Haze_01360 Corylus avellana
Hma1.2p1_0108F.1_g051730 Hydrangea macrophylla
Hma1.2p1_0150F.1_g066840 Hydrangea macrophylla
Hma1.2p1_0150F.1_g066845 Hydrangea macrophylla
Hma1.2p1_3411F.1_g335900 Hydrangea macrophylla
HPP92_012802 Vanilla planifolia
Hund03203 Selenicereus undatus
Lalb_Chr05g0218901 Lupinus albus
Lalb_Chr16g0384421 Lupinus albus
Lalb_Chr16g0384431 Lupinus albus
Lj4g0012121 Lotus japonicus
Lj6A212G5 Lonicera japonica
Lj6A223G7 Lonicera japonica
Lju470A15G16 Lonicera japonica
Lsat_1_v5_gn_1_74961 Lactuca sativa
Lsat_1_v5_gn_6_65760 Lactuca sativa
Manes.11G129000 Manihot esculenta
Mapoly0029s0087 Marchantia polymorpha
MBI11_g16039_MAGBIO Magnolia biondii
MD00G1149500 Malus domestica
Medtr4g087320 Medicago truncatula
MELO3C017762.2 Cucumis melo
MELO3C025672.2 Cucumis melo
MELO3C026654.2 Cucumis melo
MELO3C031715.2 Cucumis melo
Migut.G01176 Erythranthe guttata
Migut.N03065 Erythranthe guttata
MSTRG.22033 Avicennia marina
MSTRG.4302 Avicennia marina
MSTRG.9734 Avicennia marina
Nitab4.5_0000013g0560 Nicotiana tabacum
Nitab4.5_0001411g0030 Nicotiana tabacum
Nitab4.5_0001586g0020 Nicotiana tabacum
Nitab4.5_0002544g0010 Nicotiana tabacum
Nitab4.5_0024222g0010 Nicotiana tabacum
Nn7g37551 Nelumbo nucifera
Oeu015720.1 Olea europaea
Oeu015721.1 Olea europaea
Oeu015722.1 Olea europaea
Oeu016612.2 Olea europaea
Oeu050335.1 Olea europaea
Os02g0605400 Oryza sativa ssp. japonica
Os09g0516900 Oryza sativa ssp. japonica
Peaxi162Scf00075g01320 Petunia axillaris
Peaxi162Scf00180g00011 Petunia axillaris
Peaxi162Scf00568g00013 Petunia axillaris
PGR042G0246 Punica granatum
PGSC0003DMG400014635 Solanum tuberosum
Phvul.003G296600 Phaseolus vulgaris
Phvul.003G296800 Phaseolus vulgaris
Potri.013G127000 Populus trichocarpa
Pp3c15_5890 Physcomitrium patens
Prupe.1G207300 Prunus persica
Psat7g120160 Pisum sativum
PSO017G3340 Papaver somniferum
PSO837G0047 Papaver somniferum
QL01p009485 Quercus lobata
QL03p007878 Quercus lobata
QL10p055884 Quercus lobata
RcHm_v2.0_Chr5g0060731 Rosa chinensis
Rhsim02G0084300 Rhododendron simsii
Rhsim09G0009900 Rhododendron simsii
Sabra13G0106000 Salix brachista
SalBow3G1683 Salvia bowleyana
SalBow6G2049 Salvia bowleyana
Sc19g0002230 Simmondsia chinensis
Sed0001548 Sechium edule
Sed0016715 Sechium edule
SEGI_00445 Sequoiadendron giganteum
SEGI_09569 Sequoiadendron giganteum
SEGI_09954 Sequoiadendron giganteum
SGA_v2.0_scaffold283G46956 Striga asiatica
SHI33493 Sapria himalayana
SHI33494 Sapria himalayana
SMO358G0294 Selaginella moellendorffii
Solyc06g053420.4 Solanum lycopersicum
Solyc08g014150.4 Solanum lycopersicum
Solyc08g014170.1 Solanum lycopersicum
Sopen06g018480 Solanum pennellii
Sopen08g005080 Solanum pennellii
Sp5g03520 Schrenkiella parvula
TAR362G0335 Trochodendron aralioides
THA.LOC104817844 Tarenaya hassleriana
Thecc.04G165500 Theobroma cacao
Thhalv10005851m.g Eutrema salsugineum
TPR.G23544 Trifolium pratense
TWI15G0618 Tripterygium wilfordii
TWI63G1729 Tripterygium wilfordii
unitig_747.g21694 Utricularia gibba
unitig_747.g21695 Utricularia gibba
vmacro00695 Vaccinium macrocarpon
vmacro00696 Vaccinium macrocarpon
VMungo0251G0270 Vigna mungo
VMungo0251G3355 Vigna mungo
Zm00001eb102830 Zea mays
Zm00001eb246670 Zea mays
Zm00001eb318620 Zea mays

User provided reference genes

Program Settings