Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p25160 Brassica napus
A04p33720 Brassica napus
A05p05320 Brassica napus
Aa31LG10G15010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2264 Anthoceros agrestis
Actinidia12250 Actinidia chinensis
Actinidia12680 Actinidia chinensis
Actinidia31398 Actinidia chinensis
Ah.05g174400 Amaranthus hybridus
AL1G55650 Arabidopsis lyrata
AL4G44400 Arabidopsis lyrata
Aqoxy5G00451 Aquilegia oxysepala
Aqoxy7G00661 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9A4JNA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EDS2Z7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V1YSWS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VTP8RR Arachis hypogaea
AT1G48860 Arabidopsis thaliana
AT2G45300 Arabidopsis thaliana
ATR0757G160 Amborella trichopoda
Atru.chr5.290 Acer truncatum
Atru.chr5.291 Acer truncatum
AUR62004195 Chenopodium quinoa
AUR62013650 Chenopodium quinoa
AUR62038008 Chenopodium quinoa
BcaB01g03274 Brassica carinata
BcaB02g08943 Brassica carinata
BcaC01g05142 Brassica carinata
BolC3t15347H Brassica oleracea
BolC4t28653H Brassica oleracea
BraA03t11716Z Brassica rapa
BraA04t18834Z Brassica rapa
BraA05t19503Z Brassica rapa
C03p30000 Brassica napus
C04p71450 Brassica napus
CAN.G295.1 Capsicum annuum
CAN.G388.31 Capsicum annuum
CANSAT56G0647 Cannabis sativa
CANSAT56G3470 Cannabis sativa
CARHR140500 Cardamine hirsuta
CARHR171150 Cardamine hirsuta
Carub.0004s2793 Capsella rubella
Ca_19954_v3 Cicer arietinum L.
CBR_g26047 Chara braunii
Cc02_g24040 Coffea canephora
CDE04G0743 Ceratophyllum demersum
CDE12G0626 Ceratophyllum demersum
Cfa001747 Carpinus fangiana
Cfa024476 Carpinus fangiana
Ciclev10019734m.g Citrus clementina
CiPaw.01G263300 Carya illinoinensis
ClCG05G002340 Citrullus lanatus
COL.COLO4_12529 Corchorus olitorius
Cpa.g.sc18.106 Carica papaya
Cre03.g181300 Chlamydomonas reinhardtii
CsaV3_3G009780 Cucumis sativus L.
CSS0046086 Camellia sinensis var. sinensis
DCAR_008553 Daucus carota
Dinv32368 Davidia involucrata
Dinv43695 Davidia involucrata
Duzib133G0428 Durio zibethinus
Duzib138G1163 Durio zibethinus
Duzib138G1849 Durio zibethinus
ECA234G2802 Erigeron canadensis
ECA234G2985 Erigeron canadensis
ECA236G0363 Erigeron canadensis
ECA236G3899 Erigeron canadensis
ECA236G4962 Erigeron canadensis
EL10Ac1g00874 Beta vulgaris
EL10Ac1g00875 Beta vulgaris
EL10Ac5g11366 Beta vulgaris
Eucgr.D02465 Eucalyptus grandis
FAN01G1013 Fragaria x ananassa
FAN03G0287 Fragaria x ananassa
FAN06G2304 Fragaria x ananassa
FAN06G3189 Fragaria x ananassa
FAN10G1568 Fragaria x ananassa
FAN10G2501 Fragaria x ananassa
FvH4_7g11530 Fragaria vesca
Glyma.01G139600 Glycine max
Glyma.03G027400 Glycine max
Gohir.A07G146300 Gossypium hirsutum
Gohir.A12G101500 Gossypium hirsutum
Gohir.D07G152400 Gossypium hirsutum
Gohir.D12G104500 Gossypium hirsutum
Gohir.D12G104550 Gossypium hirsutum
Gorai.001G174400 Gossypium raimondii
Gorai.008G113600 Gossypium raimondii
Gorai.008G113700 Gossypium raimondii
Gorai.008G113800 Gossypium raimondii
GSVIVG01027670001 Vitis vinifera
GSVIVG01027673001 Vitis vinifera
GSVIVG01038750001 Vitis vinifera
HanXRQChr04g0122731 Helianthus annuus
HanXRQChr16g0520001 Helianthus annuus
Hma1.2p1_0301F.1_g118610 Hydrangea macrophylla
HPP92_020661 Vanilla planifolia
Hund17028 Selenicereus undatus
Lalb_Chr07g0189911 Lupinus albus
Lalb_Chr12g0208181 Lupinus albus
Lj3g0026165 Lotus japonicus
Lj7C530T15 Lonicera japonica
Lj9A568G56 Lonicera japonica
Lsat_1_v5_gn_4_43461 Lactuca sativa
Lsat_1_v5_gn_7_9680 Lactuca sativa
Manes.01G266800 Manihot esculenta
Manes.05G046900 Manihot esculenta
Mapoly0034s0104 Marchantia polymorpha
MBI04_g30227_MAGBIO Magnolia biondii
MBI04_g40966_MAGBIO Magnolia biondii
MBI12_g15742_MAGBIO Magnolia biondii
MCO12G366 Micromonas commoda
MD02G1207300 Malus domestica
MD02G1207400 Malus domestica
MD02G1207500 Malus domestica
MD07G1119600 Malus domestica
MD07G1119700 Malus domestica
MD10G1038600 Malus domestica
MD14G1236200 Malus domestica
Medtr4g024620 Medicago truncatula
MELO3C006199.2 Cucumis melo
Migut.B01621 Erythranthe guttata
MSTRG.17176 Avicennia marina
MSTRG.4899 Avicennia marina
Nitab4.5_0000457g0110 Nicotiana tabacum
Nitab4.5_0001329g0120 Nicotiana tabacum
Nitab4.5_0003912g0050 Nicotiana tabacum
Nitab4.5_0005272g0040 Nicotiana tabacum
Nn1g01139 Nelumbo nucifera
Oeu011923.1 Olea europaea
Oeu055501.1 Olea europaea
Os06g0133900 Oryza sativa ssp. japonica
Peaxi162Scf00013g03114 Petunia axillaris
Peaxi162Scf00959g00022 Petunia axillaris
PGR004G2250 Punica granatum
PGSC0003DMG400007018 Solanum tuberosum
PGSC0003DMG400026006 Solanum tuberosum
Phvul.010G082200 Phaseolus vulgaris
Potri.002G146400 Populus trichocarpa
Potri.014G068300 Populus trichocarpa
Pp3c20_17090 Physcomitrium patens
Pp3c23_11380 Physcomitrium patens
PRCOL_00003336 Prasinoderma coloniale
Prupe.2G143700 Prunus persica
Psat0s2394g0040 Pisum sativum
Psat0s2974g0040 Pisum sativum
Psat0s4330g0080 Pisum sativum
Psat1g092560 Pisum sativum
Psat5g109520 Pisum sativum
Psat7g227000 Pisum sativum
PSO478G4413 Papaver somniferum
PSO782G1824 Papaver somniferum
PSO832G0847 Papaver somniferum
PSO832G3659 Papaver somniferum
QL06p002672 Quercus lobata
QL08p052721 Quercus lobata
QL08p052732 Quercus lobata
RcHm_v2.0_Chr1g0349971 Rosa chinensis
Rhsim01G0149300 Rhododendron simsii
Rhsim07G0028700 Rhododendron simsii
Sabra02G0114000 Salix brachista
Sabra14G0047900 Salix brachista
SalBow5G0834 Salvia bowleyana
Sc23g0003670 Simmondsia chinensis
Sed0009137 Sechium edule
Sed0010249 Sechium edule
SGA_v2.0_scaffold153G36998 Striga asiatica
SGA_v2.0_scaffold95G28906 Striga asiatica
SMO137G0336 Selaginella moellendorffii
Solyc01g091190.3 Solanum lycopersicum
Solyc05g050980.3 Solanum lycopersicum
Sopen01g036940 Solanum pennellii
Sopen05g029450 Solanum pennellii
Sopen09g001390 Solanum pennellii
Sp4g27320 Schrenkiella parvula
Sp5g02490 Schrenkiella parvula
TAR374G0275 Trochodendron aralioides
THA.LOC104817242 Tarenaya hassleriana
Thecc.01G378400 Theobroma cacao
Thhalv10001404m.g Eutrema salsugineum
TPR.G31328 Trifolium pratense
TWI14G0817 Tripterygium wilfordii
TWI59G0119 Tripterygium wilfordii
unitig_26.g8900 Utricularia gibba
unitig_749.g14377 Utricularia gibba
unitig_749.g14378 Utricularia gibba
unitig_76.g29084 Utricularia gibba
vmacro13413 Vaccinium macrocarpon
vmacro21022 Vaccinium macrocarpon
VMungo0331G1999 Vigna mungo
Zm00001eb378020 Zea mays

User provided reference genes

Program Settings