Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p37210 Brassica napus
A01p37230 Brassica napus
A01p37640 Brassica napus
A03p40060 Brassica napus
Aa31LG8G3780 Aethionema arabicum
Actinidia14291 Actinidia chinensis
Actinidia28386 Actinidia chinensis
AL3G29580 Arabidopsis lyrata
AL3G29590 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.Q570SP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VE1P60 Arachis hypogaea
AT3G16660 Arabidopsis thaliana
AT3G16670 Arabidopsis thaliana
ATR0796G036 Amborella trichopoda
BcaB04g18928 Brassica carinata
BcaB04g20866 Brassica carinata
BcaC01g03788 Brassica carinata
BcaC09g48620 Brassica carinata
BcaC09g48665 Brassica carinata
BolC1t04684H Brassica oleracea
BolC1t04739H Brassica oleracea
BolC3t17140H Brassica oleracea
BraA01t03781Z Brassica rapa
BraA01t03783Z Brassica rapa
BraA01t03825Z Brassica rapa
BraA03t13156Z Brassica rapa
C01p47150 Brassica napus
C01p47670 Brassica napus
C03p48610 Brassica napus
CAN.G261.3 Capsicum annuum
CANSAT78G1552 Cannabis sativa
CARHR091910 Cardamine hirsuta
CARHR091920 Cardamine hirsuta
CARHR091930 Cardamine hirsuta
CARHR150150 Cardamine hirsuta
CARHR150160 Cardamine hirsuta
Carub.0002s1293 Capsella rubella
Carub.0003s1639 Capsella rubella
Carub.0003s1640 Capsella rubella
Cc03_g01690 Coffea canephora
Cfa015405 Carpinus fangiana
Cfa015408 Carpinus fangiana
Cfa021269 Carpinus fangiana
Ciclev10006409m.g Citrus clementina
Ciclev10006885m.g Citrus clementina
CiPaw.02G058900 Carya illinoinensis
CiPaw.02G059100 Carya illinoinensis
CiPaw.02G059200 Carya illinoinensis
CiPaw.02G059300 Carya illinoinensis
CiPaw.02G081300 Carya illinoinensis
CiPaw.02G081400 Carya illinoinensis
CiPaw.02G081500 Carya illinoinensis
CiPaw.02G081600 Carya illinoinensis
ClCG05G006170 Citrullus lanatus
COL.COLO4_13836 Corchorus olitorius
Cpa.g.sc16.191 Carica papaya
CsaV3_3G014750 Cucumis sativus L.
CsaV3_3G014760 Cucumis sativus L.
CsaV3_3G014770 Cucumis sativus L.
CsaV3_UNG044240 Cucumis sativus L.
CSS0008161 Camellia sinensis var. sinensis
CSS0017850 Camellia sinensis var. sinensis
DCAR_002472 Daucus carota
DCAR_022428 Daucus carota
DCAR_022429 Daucus carota
DCAR_022430 Daucus carota
DCAR_027061 Daucus carota
DCAR_027062 Daucus carota
DCAR_027064 Daucus carota
DCAR_030515 Daucus carota
DCAR_030517 Daucus carota
Dinv29764 Davidia involucrata
Duzib151G1023 Durio zibethinus
ECA240G0767 Erigeron canadensis
Eucgr.H03941 Eucalyptus grandis
FAN07G1512 Fragaria x ananassa
FAN12G0358 Fragaria x ananassa
FAN12G0988 Fragaria x ananassa
FAN12G1574 Fragaria x ananassa
FAN12G2280 Fragaria x ananassa
FAN17G0998 Fragaria x ananassa
FAN17G2113 Fragaria x ananassa
FvH4_4g18430 Fragaria vesca
FvH4_4g18480 Fragaria vesca
Glyma.09G043500 Glycine max
Gohir.A10G165200 Gossypium hirsutum
Gohir.D10G171300 Gossypium hirsutum
Gorai.011G191400 Gossypium raimondii
GSVIVG01035140001 Vitis vinifera
HanXRQChr01g0002181 Helianthus annuus
HanXRQChr03g0088801 Helianthus annuus
HanXRQChr03g0088811 Helianthus annuus
HanXRQChr03g0089351 Helianthus annuus
HanXRQChr03g0089391 Helianthus annuus
HanXRQChr03g0089401 Helianthus annuus
HanXRQChr05g0130321 Helianthus annuus
HanXRQChr08g0214531 Helianthus annuus
HanXRQChr08g0214541 Helianthus annuus
HanXRQChr13g0420001 Helianthus annuus
Haze_01182 Corylus avellana
Hma1.2p1_0078F.1_g040470 Hydrangea macrophylla
Hma1.2p1_1807F.1_g303350 Hydrangea macrophylla
HPP92_006917 Vanilla planifolia
Lalb_Chr15g0083411 Lupinus albus
Lj6g0014140 Lotus japonicus
Lsat_1_v5_gn_6_95321 Lactuca sativa
MBI18_g24867_MAGBIO Magnolia biondii
MD00G1127800 Malus domestica
Medtr2g436350 Medicago truncatula
MELO3C006672.2 Cucumis melo
MELO3C006673.2 Cucumis melo
MELO3C035189.2 Cucumis melo
Migut.N02472 Erythranthe guttata
Migut.O00777 Erythranthe guttata
MSTRG.10106 Avicennia marina
Nitab4.5_0000194g0050 Nicotiana tabacum
Nitab4.5_0000194g0060 Nicotiana tabacum
Nitab4.5_0000194g0070 Nicotiana tabacum
Nitab4.5_0000194g0080 Nicotiana tabacum
Nitab4.5_0000493g0080 Nicotiana tabacum
Nitab4.5_0000493g0090 Nicotiana tabacum
Nitab4.5_0000493g0100 Nicotiana tabacum
Nitab4.5_0000513g0180 Nicotiana tabacum
Nitab4.5_0000930g0010 Nicotiana tabacum
Nitab4.5_0003949g0030 Nicotiana tabacum
Nitab4.5_0003949g0040 Nicotiana tabacum
Nitab4.5_0005362g0030 Nicotiana tabacum
Oeu026321.1 Olea europaea
Oeu027151.1 Olea europaea
Oeu027152.1 Olea europaea
Oeu064291.1 Olea europaea
Os03g0341600 Oryza sativa ssp. japonica
Os03g0342100 Oryza sativa ssp. japonica
Os07g0674400 Oryza sativa ssp. japonica
Os07g0674500 Oryza sativa ssp. japonica
Peaxi162Scf00246g01219 Petunia axillaris
PGR004G0277 Punica granatum
PGR004G2038 Punica granatum
PGR004G2171 Punica granatum
PGR004G2879 Punica granatum
PGSC0003DMG400011334 Solanum tuberosum
Phvul.009G249400 Phaseolus vulgaris
Potri.010G012400 Populus trichocarpa
Prupe.1G133600 Prunus persica
Prupe.1G133700 Prunus persica
Psat1g155160 Pisum sativum
PSO210G5566 Papaver somniferum
PSO832G2395 Papaver somniferum
QL06p009664 Quercus lobata
QL06p009701 Quercus lobata
QL06p009717 Quercus lobata
QL06p009725 Quercus lobata
QL06p009739 Quercus lobata
QL06p009754 Quercus lobata
QL06p009759 Quercus lobata
QL06p009778 Quercus lobata
QL06p009790 Quercus lobata
QL06p009796 Quercus lobata
QL06p009817 Quercus lobata
QL06p009834 Quercus lobata
QL06p009884 Quercus lobata
QL06p009891 Quercus lobata
QL06p009948 Quercus lobata
QL93p0060_0003 Quercus lobata
QL93p0060_0019 Quercus lobata
QL93p0060_0027 Quercus lobata
QL93p0060_0047 Quercus lobata
RcHm_v2.0_Chr4g0422901 Rosa chinensis
RcHm_v2.0_Chr4g0422991 Rosa chinensis
Rhsim02G0008000 Rhododendron simsii
Sabra10G0007900 Salix brachista
SalBow2G0621 Salvia bowleyana
SalBow2G2654 Salvia bowleyana
Sed0004032 Sechium edule
Sed0026730 Sechium edule
SGA_v2.0_scaffold177G39437 Striga asiatica
SGA_v2.0_scaffold18G08345 Striga asiatica
Solyc01g066680.3 Solanum lycopersicum
Sopen01g028300 Solanum pennellii
Sp3g14950 Schrenkiella parvula
TAR362G0267 Trochodendron aralioides
THA.LOC104820292 Tarenaya hassleriana
Thecc.04G287000 Theobroma cacao
Thhalv10021522m.g Eutrema salsugineum
Thhalv10021613m.g Eutrema salsugineum
TPR.G31280 Trifolium pratense
TWI09G1223 Tripterygium wilfordii
vmacro15222 Vaccinium macrocarpon
VMungo1309G1767 Vigna mungo
Zm00001eb016390 Zea mays
Zm00001eb016410 Zea mays
Zm00001eb111390 Zea mays

User provided reference genes

Program Settings