Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p19290 Brassica napus
A04p26550 Brassica napus
Aa31LG10G6570 Aethionema arabicum
Aa31LG6G11830 Aethionema arabicum
Aa31sc1240G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2744 Anthoceros agrestis
Actinidia02872 Actinidia chinensis
Actinidia20762 Actinidia chinensis
Actinidia20763 Actinidia chinensis
Actinidia28753 Actinidia chinensis
Ah.06g188300 Amaranthus hybridus
AL1G44630 Arabidopsis lyrata
AL4G30740 Arabidopsis lyrata
AL4G35010 Arabidopsis lyrata
AL4G36550 Arabidopsis lyrata
Aqoxy3G00418 Aquilegia oxysepala
Aqoxy3G00897 Aquilegia oxysepala
Aqoxy6G01535 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4LH58N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JIK3X3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NE22RT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PJLZ8M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PPI4NM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UQ0JCX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VZS2MK Arachis hypogaea
AT1G30590 Arabidopsis thaliana
AT2G34750 Arabidopsis thaliana
AT2G39240 Arabidopsis thaliana
ATR0605G358 Amborella trichopoda
Atru.chr3.55 Acer truncatum
AUR62000583 Chenopodium quinoa
AUR62006940 Chenopodium quinoa
BcaB05g23816 Brassica carinata
BcaB06g28796 Brassica carinata
BcaC01g05764 Brassica carinata
BcaC02g11551 Brassica carinata
BcaC06g35972 Brassica carinata
BcaC06g35980 Brassica carinata
BcaC06g35981 Brassica carinata
BolC3t14644H Brassica oleracea
BolC3t18231H Brassica oleracea
BolC4t22991H Brassica oleracea
BolC4t27866H Brassica oleracea
BraA03t11183Z Brassica rapa
BraA04t18159Z Brassica rapa
BraA05t20035Z Brassica rapa
BraA05t21411Z Brassica rapa
C03p22480 Brassica napus
C03p59690 Brassica napus
C04p14010 Brassica napus
C04p63970 Brassica napus
C07p01430 Brassica napus
C07p01640 Brassica napus
CAN.G1428.5 Capsicum annuum
CANSAT35G0647 Cannabis sativa
CARHR128910 Cardamine hirsuta
Carub.0001s2885 Capsella rubella
Carub.0004s1644 Capsella rubella
Carub.0004s2129 Capsella rubella
Ca_21575_v3 Cicer arietinum L.
CBR_g23271 Chara braunii
Cc07_g12170 Coffea canephora
CDE06G1199 Ceratophyllum demersum
CDE07G0217 Ceratophyllum demersum
Cfa007110 Carpinus fangiana
Cfa016374 Carpinus fangiana
Cfa022001 Carpinus fangiana
Cfa022324 Carpinus fangiana
Ciclev10010647m.g Citrus clementina
Ciclev10010838m.g Citrus clementina
CiPaw.15G173100 Carya illinoinensis
ClCG02G000270 Citrullus lanatus
ClCG05G001500 Citrullus lanatus
COL.COLO4_16224 Corchorus olitorius
Cpa.g.sc7.212 Carica papaya
Cpa.g.sc7.213 Carica papaya
Cre03.g207950 Chlamydomonas reinhardtii
CsaV3_3G008890 Cucumis sativus L.
CSS0035723 Camellia sinensis var. sinensis
DCAR_007549 Daucus carota
DCAR_007550 Daucus carota
Dinv28297 Davidia involucrata
Dinv40214 Davidia involucrata
Duzib147G0916 Durio zibethinus
EL10Ac4g09711 Beta vulgaris
EL10Ac6g14558 Beta vulgaris
Eucgr.J02557 Eucalyptus grandis
FAN19G1026 Fragaria x ananassa
FAN23G0637 Fragaria x ananassa
FAN23G2523 Fragaria x ananassa
FAN26G1725 Fragaria x ananassa
FAN28G2151 Fragaria x ananassa
FvH4_1g10010 Fragaria vesca
Glyma.09G196200 Glycine max
Glyma.16G112800 Glycine max
Gohir.A02G119802 Gossypium hirsutum
Gohir.A02G120000 Gossypium hirsutum
Gohir.D03G066500 Gossypium hirsutum
Gorai.003G064600 Gossypium raimondii
GSVIVG01026437001 Vitis vinifera
GSVIVG01026438001 Vitis vinifera
GSVIVG01026439001 Vitis vinifera
GSVIVG01026448001 Vitis vinifera
HanXRQChr05g0145981 Helianthus annuus
HanXRQChr09g0270331 Helianthus annuus
HanXRQChr16g0510861 Helianthus annuus
Haze_00123 Corylus avellana
Haze_03640 Corylus avellana
Hma1.2p1_0085F.1_g044410 Hydrangea macrophylla
HPP92_018392 Vanilla planifolia
Hund21770 Selenicereus undatus
Hund28202 Selenicereus undatus
Hund28214 Selenicereus undatus
Lalb_Chr05g0229501 Lupinus albus
Lalb_Chr09g0334501 Lupinus albus
Lj2C504G7 Lonicera japonica
Lj4g0013403 Lotus japonicus
Lsat_1_v5_gn_5_30740 Lactuca sativa
Manes.01G157300 Manihot esculenta
Manes.11G091200 Manihot esculenta
Mapoly0144s0013 Marchantia polymorpha
MBI04_g31205_MAGBIO Magnolia biondii
MCO15G598 Micromonas commoda
MD02G1108900 Malus domestica
Medtr4g117680 Medicago truncatula
Medtr4g117730 Medicago truncatula
Medtr8g085920 Medicago truncatula
MELO3C006107.2 Cucumis melo
Migut.A00468 Erythranthe guttata
MSTRG.20424 Avicennia marina
Nitab4.5_0000588g0180 Nicotiana tabacum
Nitab4.5_0000855g0080 Nicotiana tabacum
Nitab4.5_0003096g0020 Nicotiana tabacum
Nn5g28137 Nelumbo nucifera
Oeu000297.1 Olea europaea
Oeu010807.1 Olea europaea
Oeu063413.2 Olea europaea
Os06g0688100 Oryza sativa ssp. japonica
Peaxi162Scf00015g00939 Petunia axillaris
Peaxi162Scf00344g01722 Petunia axillaris
Peaxi162Scf00677g00114 Petunia axillaris
PGR044G1248 Punica granatum
PGSC0003DMG400013664 Solanum tuberosum
Phvul.010G020100 Phaseolus vulgaris
Potri.005G098500 Populus trichocarpa
Potri.007G065101 Populus trichocarpa
Pp3c18_6750 Physcomitrium patens
Pp3c18_6751 Physcomitrium patens
Pp3c21_14490 Physcomitrium patens
PRCOL_00004831 Prasinoderma coloniale
Prupe.7G186400 Prunus persica
Prupe.7G186500 Prunus persica
Psat0s4462g0080 Pisum sativum
Psat3g044960 Pisum sativum
Psat7g042440 Pisum sativum
PSO017G0405 Papaver somniferum
PSO170G6051 Papaver somniferum
PSO782G3432 Papaver somniferum
QL06p053198 Quercus lobata
RcHm_v2.0_Chr2g0096801 Rosa chinensis
RcHm_v2.0_Chr2g0096821 Rosa chinensis
RcHm_v2.0_Chr2g0096831 Rosa chinensis
RcHm_v2.0_Chr2g0096841 Rosa chinensis
Rhsim08G0026200 Rhododendron simsii
Sabra05G0080900 Salix brachista
SalBow7G0297 Salvia bowleyana
SalBow7G2073 Salvia bowleyana
Sc06g0005250 Simmondsia chinensis
Sc09g0001980 Simmondsia chinensis
Sed0003470 Sechium edule
Sed0013779 Sechium edule
SEGI_33601 Sequoiadendron giganteum
SGA_v2.0_scaffold172G38971 Striga asiatica
SGA_v2.0_scaffold36G14401 Striga asiatica
SHI13961 Sapria himalayana
SMO356G0429 Selaginella moellendorffii
Solyc02g082340.3 Solanum lycopersicum
Sopen02g027000 Solanum pennellii
Sp4g17040 Schrenkiella parvula
TAR376G1176 Trochodendron aralioides
TAR381G1444 Trochodendron aralioides
THA.LOC104798595 Tarenaya hassleriana
THA.LOC104814350 Tarenaya hassleriana
Thecc.01G002200 Theobroma cacao
Thhalv10007103m.g Eutrema salsugineum
Thhalv10016395m.g Eutrema salsugineum
TPR.G29658 Trifolium pratense
TWI79G1391 Tripterygium wilfordii
unitig_699.g19839 Utricularia gibba
vmacro18474 Vaccinium macrocarpon
VMungo1309G1473 Vigna mungo
Zm00001eb135340 Zea mays
Zm00001eb226160 Zea mays

User provided reference genes

Program Settings