Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11190 Brassica napus
A02p26370 Brassica napus
Aa31LG9G11070 Aethionema arabicum
Aa31LG9G1140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2762 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4384 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.284 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.156 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.749 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.71 Anthoceros agrestis
Actinidia02027 Actinidia chinensis
Actinidia05218 Actinidia chinensis
Actinidia14539 Actinidia chinensis
Ah.02g112600 Amaranthus hybridus
Ah.02g114170 Amaranthus hybridus
AL7G33140 Arabidopsis lyrata
AL7G33560 Arabidopsis lyrata
Aqoxy7G00384 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4S7XPI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8PBF31 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.91GX53 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JK8X7C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PF4BFX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QX30GY Arachis hypogaea
AT4G20330 Arabidopsis thaliana
AT4G21010 Arabidopsis thaliana
ATR0706G062 Amborella trichopoda
Atru.chr12.1280 Acer truncatum
Atru.chr12.1289 Acer truncatum
AUR62001667 Chenopodium quinoa
AUR62019502 Chenopodium quinoa
AUR62020113 Chenopodium quinoa
AUR62029439 Chenopodium quinoa
BcaB05g23861 Brassica carinata
BcaC03g16372 Brassica carinata
BcaC06g35901 Brassica carinata
BcaC09g51426 Brassica carinata
BcaNung01799 Brassica carinata
BolC1t01297H Brassica oleracea
BolC1t04145H Brassica oleracea
BolC2t10224H Brassica oleracea
BolC7t41428H Brassica oleracea
BraA01t01065Z Brassica rapa
BraA02t07639Z Brassica rapa
C01p13230 Brassica napus
C02p41910 Brassica napus
C02p50430 Brassica napus
C07p09870 Brassica napus
CAN.G100.2 Capsicum annuum
CAN.G308.26 Capsicum annuum
CANSAT25G0208 Cannabis sativa
CANSAT80G2251 Cannabis sativa
CARHR227160 Cardamine hirsuta
CARHR255490 Cardamine hirsuta
Carub.0007s2043 Capsella rubella
Carub.0007s2084 Capsella rubella
Ca_24562_v3 Cicer arietinum L.
CBR_g21779 Chara braunii
Cc08_g14280 Coffea canephora
Cfa012141 Carpinus fangiana
Cfa020619 Carpinus fangiana
Cfa026945 Carpinus fangiana
Ciclev10021533m.g Citrus clementina
CiPaw.10G013100 Carya illinoinensis
ClCG07G007970 Citrullus lanatus
COL.COLO4_18522 Corchorus olitorius
COL.COLO4_34423 Corchorus olitorius
Cpa.g.sc87.99 Carica papaya
Cre12.g512700 Chlamydomonas reinhardtii
CsaV3_4G006050 Cucumis sativus L.
CSS0024384 Camellia sinensis var. sinensis
CSS0033515 Camellia sinensis var. sinensis
DCAR_000683 Daucus carota
DCAR_006753 Daucus carota
Dinv15154 Davidia involucrata
Dinv37666 Davidia involucrata
Dinv38980 Davidia involucrata
Duzib084G0581 Durio zibethinus
Duzib205G1106 Durio zibethinus
ECA233G5713 Erigeron canadensis
ECA233G6218 Erigeron canadensis
ECA236G2163 Erigeron canadensis
EL10Ac7g16147 Beta vulgaris
Eucgr.D01884 Eucalyptus grandis
Eucgr.J02343 Eucalyptus grandis
Eucgr.L03418 Eucalyptus grandis
FAN04G1619 Fragaria x ananassa
FAN08G1588 Fragaria x ananassa
FAN11G0059 Fragaria x ananassa
FAN13G0859 Fragaria x ananassa
FAN16G2260 Fragaria x ananassa
FAN18G3554 Fragaria x ananassa
FvH4_3g33500 Fragaria vesca
FvH4_5g01870 Fragaria vesca
Glyma.01G217900 Glycine max
Glyma.05G205200 Glycine max
Glyma.08G012100 Glycine max
Glyma.11G025300 Glycine max
Gohir.A08G179800 Gossypium hirsutum
Gohir.A11G021800 Gossypium hirsutum
Gohir.D08G198600 Gossypium hirsutum
Gohir.D11G021500 Gossypium hirsutum
Gorai.004G209400 Gossypium raimondii
Gorai.007G022800 Gossypium raimondii
GSVIVG01019026001 Vitis vinifera
GSVIVG01019802001 Vitis vinifera
HanXRQChr01g0003921 Helianthus annuus
HanXRQChr01g0021601 Helianthus annuus
HanXRQChr12g0362511 Helianthus annuus
Haze_08903 Corylus avellana
Haze_09386 Corylus avellana
Hma1.2p1_0358F.1_g134700 Hydrangea macrophylla
Hma1.2p1_0514F.1_g169810 Hydrangea macrophylla
Hma1.2p1_1018F.1_g248440 Hydrangea macrophylla
HPP92_025983 Vanilla planifolia
Hund04873 Selenicereus undatus
Hund18853 Selenicereus undatus
Hund18854 Selenicereus undatus
Lalb_Chr09g0325531 Lupinus albus
Lalb_Chr16g0377171 Lupinus albus
Lalb_Chr16g0389821 Lupinus albus
Lj2g0020834 Lotus japonicus
Lj4A550T46 Lonicera japonica
Lj4A578T54 Lonicera japonica
Lj4g0009826 Lotus japonicus
Lsat_1_v5_gn_7_16741 Lactuca sativa
Lsat_1_v5_gn_7_82800 Lactuca sativa
Lsat_1_v5_gn_7_84001 Lactuca sativa
Manes.01G064600 Manihot esculenta
Manes.02G024800 Manihot esculenta
Mapoly0033s0069 Marchantia polymorpha
MBI13_g09223_MAGBIO Magnolia biondii
MCO15G364 Micromonas commoda
MD06G1076900 Malus domestica
MD14G1026100 Malus domestica
MD14G1098300 Malus domestica
Medtr0411s0050 Medicago truncatula
Medtr3g109978 Medicago truncatula
Medtr3g110015 Medicago truncatula
Medtr5g010620 Medicago truncatula
Medtr6g004330 Medicago truncatula
Medtr8g068180 Medicago truncatula
Medtr8g096950 Medicago truncatula
MELO3C016344.2 Cucumis melo
Migut.A00798 Erythranthe guttata
Migut.J01798 Erythranthe guttata
MSTRG.12004 Avicennia marina
MSTRG.24318 Avicennia marina
MSTRG.25587 Avicennia marina
Nitab4.5_0000293g0060 Nicotiana tabacum
Nitab4.5_0003440g0010 Nicotiana tabacum
Nitab4.5_0005772g0010 Nicotiana tabacum
Nn3g20000 Nelumbo nucifera
Nn8g38712 Nelumbo nucifera
Oeu028567.1 Olea europaea
Os03g0176100 Oryza sativa ssp. japonica
Os10g0397200 Oryza sativa ssp. japonica
Peaxi162Scf00269g01517 Petunia axillaris
PGR031G0486 Punica granatum
PGSC0003DMG400005187 Solanum tuberosum
Phvul.002G155700 Phaseolus vulgaris
Phvul.002G287100 Phaseolus vulgaris
Potri.001G107500 Populus trichocarpa
Pp3c12_26130 Physcomitrium patens
PRCOL_00003678 Prasinoderma coloniale
Prupe.5G094900 Prunus persica
Psat2g181960 Pisum sativum
Psat7g035800 Pisum sativum
PSO339G0315 Papaver somniferum
PSO478G0071 Papaver somniferum
PSO541G4836 Papaver somniferum
PSO675G3746 Papaver somniferum
PSO782G4767 Papaver somniferum
PSO801G0718 Papaver somniferum
QL12p017921 Quercus lobata
RcHm_v2.0_Chr5g0060921 Rosa chinensis
RcHm_v2.0_Chr7g0198651 Rosa chinensis
Rhsim04G0239900 Rhododendron simsii
Rhsim07G0092300 Rhododendron simsii
Sabra01G0081400 Salix brachista
SalBow5G2014 Salvia bowleyana
SalBow5G2552 Salvia bowleyana
SalBow6G3200 Salvia bowleyana
Sc07g0009620 Simmondsia chinensis
Sed0001180 Sechium edule
SEGI_03322 Sequoiadendron giganteum
SEGI_09725 Sequoiadendron giganteum
SEGI_38142 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30463 Striga asiatica
SGA_v2.0_scaffold253G45113 Striga asiatica
SMO169G0005 Selaginella moellendorffii
Solyc06g064890.4 Solanum lycopersicum
Sopen06g023410 Solanum pennellii
Sp6g06320 Schrenkiella parvula
Sp7g18680 Schrenkiella parvula
TAR629G0228 Trochodendron aralioides
THA.LOC104813037 Tarenaya hassleriana
THA.LOC104814932 Tarenaya hassleriana
Thecc.03G274900 Theobroma cacao
Thhalv10025896m.g Eutrema salsugineum
Thhalv10026795m.g Eutrema salsugineum
TPR.G12978 Trifolium pratense
TPR.G6680 Trifolium pratense
TWI36G0215 Tripterygium wilfordii
TWI81G0588 Tripterygium wilfordii
unitig_22.g5344 Utricularia gibba
unitig_8.g3787 Utricularia gibba
vmacro08033 Vaccinium macrocarpon
vmacro13943 Vaccinium macrocarpon
VMungo0251G2562 Vigna mungo
VMungo1215G2126 Vigna mungo
Zm00001eb071210 Zea mays
Zm00001eb268290 Zea mays

User provided reference genes

Program Settings