Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p38270 Brassica napus
A06p38100 Brassica napus
Aa31LG11G8530 Aethionema arabicum
Aa31LG6G6190 Aethionema arabicum
Aa31sc56G40 Aethionema arabicum
Aa31sc56G50 Aethionema arabicum
Aa31sc664G10 Aethionema arabicum
Aa31sc770G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.453 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.455 Anthoceros agrestis
Actinidia04499 Actinidia chinensis
Actinidia18358 Actinidia chinensis
Actinidia40102 Actinidia chinensis
Ah.04g162310 Amaranthus hybridus
Ah.06g192340 Amaranthus hybridus
AL6G40840 Arabidopsis lyrata
Aqoxy5G00374 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5V5EDD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.678G3Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CCG0UK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N3WVHA Arachis hypogaea
AT5G28840 Arabidopsis thaliana
ATR0665G322 Amborella trichopoda
Atru.chr2.812 Acer truncatum
Atru.chr4.2313 Acer truncatum
AUR62001012 Chenopodium quinoa
AUR62004947 Chenopodium quinoa
BcaB07g34170 Brassica carinata
BcaB07g34172 Brassica carinata
BcaC03g17748 Brassica carinata
BcaC06g30688 Brassica carinata
BcaNung02112 Brassica carinata
BolC2t11833H Brassica oleracea
BolC7t44548H Brassica oleracea
BraA02t08808Z Brassica rapa
BraA06t26724Z Brassica rapa
C02p57600 Brassica napus
C07p40110 Brassica napus
CAN.G134.99 Capsicum annuum
CAN.G749.15 Capsicum annuum
CANSAT54G0118 Cannabis sativa
CANSAT78G0756 Cannabis sativa
CARHR185350 Cardamine hirsuta
Carub.0006s2611 Capsella rubella
Ca_09421_v3 Cicer arietinum L.
Ca_10047_v3 Cicer arietinum L.
CBR_g28830 Chara braunii
Cc02_g30610 Coffea canephora
Cc03_g04510 Coffea canephora
CDE04G2651 Ceratophyllum demersum
CDE06G2828 Ceratophyllum demersum
CDE07G1835 Ceratophyllum demersum
Cfa006415 Carpinus fangiana
Cfa006417 Carpinus fangiana
Cfa006418 Carpinus fangiana
Ciclev10001524m.g Citrus clementina
Ciclev10006605m.g Citrus clementina
CiPaw.01G193200 Carya illinoinensis
CiPaw.07G067100 Carya illinoinensis
CiPaw.08G123900 Carya illinoinensis
ClCG02G016600 Citrullus lanatus
COL.COLO4_15344 Corchorus olitorius
COL.COLO4_16793 Corchorus olitorius
Cpa.g.sc117.87 Carica papaya
Cre01.g019250 Chlamydomonas reinhardtii
CsaV3_2G004170 Cucumis sativus L.
CSS0006461 Camellia sinensis var. sinensis
CSS0032248 Camellia sinensis var. sinensis
CSS0034886 Camellia sinensis var. sinensis
DCAR_024194 Daucus carota
DCAR_027261 Daucus carota
Dinv04729 Davidia involucrata
Dinv10027 Davidia involucrata
Dinv14069 Davidia involucrata
Dinv44603 Davidia involucrata
Duzib106G0905 Durio zibethinus
Duzib177G0783 Durio zibethinus
ECA240G2740 Erigeron canadensis
EL10Ac4g09137 Beta vulgaris
Eucgr.B02118 Eucalyptus grandis
Eucgr.H04339 Eucalyptus grandis
FAN02G0265 Fragaria x ananassa
FAN05G1980 Fragaria x ananassa
FAN05G4670 Fragaria x ananassa
FAN09G2716 Fragaria x ananassa
FAN14G0428 Fragaria x ananassa
FvH4_6g02980 Fragaria vesca
Glyma.03G247000 Glycine max
Glyma.10G162000 Glycine max
Glyma.19G244600 Glycine max
Glyma.19G244700 Glycine max
Glyma.20G224400 Glycine max
Gohir.A08G215300 Gossypium hirsutum
Gohir.A13G104400 Gossypium hirsutum
Gohir.D08G232000 Gossypium hirsutum
Gohir.D13G107800 Gossypium hirsutum
Gorai.004G246500 Gossypium raimondii
Gorai.013G120800 Gossypium raimondii
GSVIVG01018081001 Vitis vinifera
GSVIVG01021793001 Vitis vinifera
HanXRQChr03g0092631 Helianthus annuus
HanXRQChr13g0423551 Helianthus annuus
Haze_04365 Corylus avellana
Hma1.2p1_1095F.1_g256530 Hydrangea macrophylla
HPP92_017643 Vanilla planifolia
Hund06968 Selenicereus undatus
Hund22115 Selenicereus undatus
Lalb_Chr02g0148811 Lupinus albus
Lalb_Chr21g0310971 Lupinus albus
Lalb_Chr23g0272681 Lupinus albus
Lj1g0019534 Lotus japonicus
Lj3C720T8 Lonicera japonica
Lj5g0004692 Lotus japonicus
Lj6A651T65 Lonicera japonica
Lsat_1_v5_gn_3_123981 Lactuca sativa
Manes.08G134400 Manihot esculenta
Manes.09G153400 Manihot esculenta
Manes.15G034700 Manihot esculenta
Mapoly0101s0064 Marchantia polymorpha
MBI04_g19770_MAGBIO Magnolia biondii
MBI11_g28617_MAGBIO Magnolia biondii
MCO09G112 Micromonas commoda
MCO17G082 Micromonas commoda
MD04G1224100 Malus domestica
MD04G1224200 Malus domestica
MD12G1240900 Malus domestica
Medtr1g080950 Medicago truncatula
Medtr7g115080 Medicago truncatula
MELO3C004377.2 Cucumis melo
Migut.G00395 Erythranthe guttata
Migut.N00226 Erythranthe guttata
MSTRG.21885 Avicennia marina
MSTRG.9940 Avicennia marina
Nitab4.5_0000941g0060 Nicotiana tabacum
Nitab4.5_0001592g0070 Nicotiana tabacum
Nitab4.5_0005057g0010 Nicotiana tabacum
Nitab4.5_0012228g0030 Nicotiana tabacum
Nn1g02521 Nelumbo nucifera
Nn1g02835 Nelumbo nucifera
Nn1g02836 Nelumbo nucifera
Nn1g08966 Nelumbo nucifera
Nn2g14812 Nelumbo nucifera
Nn3g19478 Nelumbo nucifera
Oeu012951.1 Olea europaea
Oeu032624.1 Olea europaea
Oeu064222.2 Olea europaea
Os10g0417600 Oryza sativa ssp. japonica
Os11g0591100 Oryza sativa ssp. japonica
Peaxi162Scf00282g00331 Petunia axillaris
Peaxi162Scf00788g10013 Petunia axillaris
PGR004G0626 Punica granatum
PGR142G0145 Punica granatum
PGR142G3919 Punica granatum
PGSC0003DMG400006097 Solanum tuberosum
PGSC0003DMG400019454 Solanum tuberosum
Phvul.006G101600 Phaseolus vulgaris
Phvul.007G187300 Phaseolus vulgaris
Potri.005G053000 Populus trichocarpa
Potri.013G040600 Populus trichocarpa
Pp3c17_15920 Physcomitrium patens
Pp3c1_30660 Physcomitrium patens
Pp3c23_6850 Physcomitrium patens
Pp3c2_7940 Physcomitrium patens
Pp3c3_10859 Physcomitrium patens
PRCOL_00005834 Prasinoderma coloniale
PRCOL_00006583 Prasinoderma coloniale
Prupe.1G025100 Prunus persica
Prupe.6G342800 Prunus persica
Psat2g125080 Pisum sativum
Psat6g146120 Pisum sativum
PSO170G1635 Papaver somniferum
PSO210G2308 Papaver somniferum
PSO832G1233 Papaver somniferum
QL03p025783 Quercus lobata
QL06p000371 Quercus lobata
RcHm_v2.0_Chr3g0451161 Rosa chinensis
RcHm_v2.0_Chr4g0388911 Rosa chinensis
Rhsim02G0031900 Rhododendron simsii
Rhsim07G0075600 Rhododendron simsii
Sabra05G0046600 Salix brachista
Sabra13G0037500 Salix brachista
SalBow2G3200 Salvia bowleyana
Sc09g0003900 Simmondsia chinensis
Sed0004835 Sechium edule
Sed0017591 Sechium edule
SEGI_25647 Sequoiadendron giganteum
SGA_v2.0_scaffold308G48111 Striga asiatica
SGA_v2.0_scaffold79G25613 Striga asiatica
SMO001G0012 Selaginella moellendorffii
SMO199G0116 Selaginella moellendorffii
SMO203G0029 Selaginella moellendorffii
SMO307G0043 Selaginella moellendorffii
SMO327G0015 Selaginella moellendorffii
SMO353G0319 Selaginella moellendorffii
SMO353G0345 Selaginella moellendorffii
SMO364G0309 Selaginella moellendorffii
SMO364G0429 Selaginella moellendorffii
Solyc01g097340.3 Solanum lycopersicum
Solyc09g082990.3 Solanum lycopersicum
Sopen01g041010 Solanum pennellii
Sopen09g031860 Solanum pennellii
Sp2g20030 Schrenkiella parvula
TAR262G0003 Trochodendron aralioides
TAR362G0954 Trochodendron aralioides
TAR362G1283 Trochodendron aralioides
TAR365G0726 Trochodendron aralioides
TAR636G0762 Trochodendron aralioides
THA.LOC104818631 Tarenaya hassleriana
THA.LOC104821677 Tarenaya hassleriana
Thecc.05G283800 Theobroma cacao
Thhalv10004408m.g Eutrema salsugineum
TPR.G12863 Trifolium pratense
TPR.G493 Trifolium pratense
TPR.G6930 Trifolium pratense
TWI12G0973 Tripterygium wilfordii
TWI56G0760 Tripterygium wilfordii
unitig_32.g11719 Utricularia gibba
unitig_748.g7311 Utricularia gibba
vmacro13829 Vaccinium macrocarpon
vmacro15396 Vaccinium macrocarpon
VMungo0540G0812 Vigna mungo
VMungo0720G1596 Vigna mungo
Zm00001eb047980 Zea mays
Zm00001eb167750 Zea mays

User provided reference genes

Program Settings