Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p17940 Brassica napus
A02p39390 Brassica napus
A09p05760 Brassica napus
Aa31LG6G6800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1521 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3140 Anthoceros agrestis
Actinidia07341 Actinidia chinensis
Actinidia21930 Actinidia chinensis
Actinidia22845 Actinidia chinensis
Ah.02g111040 Amaranthus hybridus
Ah.02g111050 Amaranthus hybridus
Ah.03g141790 Amaranthus hybridus
AL1G54410 Arabidopsis lyrata
AL6G38480 Arabidopsis lyrata
Aqoxy1G00889 Aquilegia oxysepala
Aqoxy2G01063 Aquilegia oxysepala
Aqoxy2G01066 Aquilegia oxysepala
Aqoxy2G01067 Aquilegia oxysepala
Aqoxy3G03828 Aquilegia oxysepala
Aqoxy5G02844 Aquilegia oxysepala
Aqoxy6G00172 Aquilegia oxysepala
Aqoxy6G00226 Aquilegia oxysepala
Aqoxy6G02749 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2YC2I5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U6RQRB Arachis hypogaea
AT5G26710 Arabidopsis thaliana
ATR0796G302 Amborella trichopoda
ATR1136G120 Amborella trichopoda
ATR1136G149 Amborella trichopoda
Atru.chr1.306 Acer truncatum
Atru.chr1.409 Acer truncatum
Atru.chr11.491 Acer truncatum
Atru.chr13.1966 Acer truncatum
Atru.chr13.1980 Acer truncatum
AUR62008072 Chenopodium quinoa
AUR62014111 Chenopodium quinoa
AUR62025347 Chenopodium quinoa
AUR62028350 Chenopodium quinoa
AUR62028653 Chenopodium quinoa
BcaB04g19725 Brassica carinata
BcaB07g29965 Brassica carinata
BcaC03g17873 Brassica carinata
BcaC04g23627 Brassica carinata
BcaC09g50627 Brassica carinata
BcaNung03957 Brassica carinata
BolC1t02203H Brassica oleracea
BolC2t11967H Brassica oleracea
BolC9t53555H Brassica oleracea
BraA01t01749Z Brassica rapa
BraA02t08908Z Brassica rapa
BraA09t36217Z Brassica rapa
C01p22740 Brassica napus
C02p59120 Brassica napus
C09p06360 Brassica napus
CAN.G1379.39 Capsicum annuum
CANSAT21G1713 Cannabis sativa
CANSAT54G0864 Cannabis sativa
CARHR186940 Cardamine hirsuta
Carub.0006s1562 Capsella rubella
Carub.0006s2425 Capsella rubella
Carub.0008s0761 Capsella rubella
Ca_10216_v3 Cicer arietinum L.
Ca_10218_v3 Cicer arietinum L.
CBR_g26306 Chara braunii
Cc02_g36940 Coffea canephora
CDE07G0190 Ceratophyllum demersum
Cfa023978 Carpinus fangiana
Ciclev10000427m.g Citrus clementina
Ciclev10004035m.g Citrus clementina
CiPaw.08G124500 Carya illinoinensis
ClCG01G011110 Citrullus lanatus
ClCG03G017950 Citrullus lanatus
COL.COLO4_30058 Corchorus olitorius
COL.COLO4_38242 Corchorus olitorius
Cpa.g.sc248.3 Carica papaya
Cre11.g467547 Chlamydomonas reinhardtii
CsaV3_1G038230 Cucumis sativus L.
DCAR_025145 Daucus carota
Dinv24529 Davidia involucrata
Duzib114G0227 Durio zibethinus
ECA248G0367 Erigeron canadensis
EL10Ac3g05568 Beta vulgaris
EL10Ac5g10592 Beta vulgaris
EL10Ac8g19499 Beta vulgaris
Eucgr.H01345 Eucalyptus grandis
FAN02G4321 Fragaria x ananassa
FAN04G0100 Fragaria x ananassa
FAN05G3179 Fragaria x ananassa
FAN08G3470 Fragaria x ananassa
FAN09G3541 Fragaria x ananassa
FAN13G3161 Fragaria x ananassa
FAN14G0147 Fragaria x ananassa
FAN18G1855 Fragaria x ananassa
FAN19G0332 Fragaria x ananassa
FAN23G0425 Fragaria x ananassa
FvH4_1g07040 Fragaria vesca
FvH4_3g18420 Fragaria vesca
FvH4_5g29940 Fragaria vesca
FvH4_5g37210 Fragaria vesca
FvH4_6g08750 Fragaria vesca
FvH4_6g28340 Fragaria vesca
Glyma.10G141500 Glycine max
Glyma.20G090100 Glycine max
Gohir.A05G395500 Gossypium hirsutum
Gohir.A10G193500 Gossypium hirsutum
Gohir.A10G193600 Gossypium hirsutum
Gohir.D04G019500 Gossypium hirsutum
Gohir.D10G200900 Gossypium hirsutum
Gorai.011G225600 Gossypium raimondii
Gorai.012G023300 Gossypium raimondii
GSVIVG01004780001 Vitis vinifera
GSVIVG01031352001 Vitis vinifera
GSVIVG01031353001 Vitis vinifera
HanXRQChr01g0006301 Helianthus annuus
HanXRQChr03g0071281 Helianthus annuus
Hma1.2p1_0052F.1_g030240 Hydrangea macrophylla
Hma1.2p1_0157F.1_g069530 Hydrangea macrophylla
Hma1.2p1_0501F.1_g167480 Hydrangea macrophylla
HPP92_024100 Vanilla planifolia
Hund02802 Selenicereus undatus
Hund09479 Selenicereus undatus
Hund13755 Selenicereus undatus
Lalb_Chr02g0147381 Lupinus albus
Lalb_Chr21g0309971 Lupinus albus
Lj5A313G75 Lonicera japonica
Lj5C314T1 Lonicera japonica
Lj5g0014755 Lotus japonicus
Lj5g0014866 Lotus japonicus
Lj6A155G23 Lonicera japonica
Lj6A159G12 Lonicera japonica
Lsat_1_v5_gn_3_136520 Lactuca sativa
Lsat_1_v5_gn_3_136641 Lactuca sativa
Lsat_1_v5_gn_3_136681 Lactuca sativa
Lsat_1_v5_gn_3_137140 Lactuca sativa
Lsat_1_v5_gn_3_138261 Lactuca sativa
Lsat_1_v5_gn_7_54881 Lactuca sativa
Manes.08G106300 Manihot esculenta
Manes.09G182400 Manihot esculenta
Mapoly0023s0025 Marchantia polymorpha
MBI18_g03866_MAGBIO Magnolia biondii
MCO01G376 Micromonas commoda
MCO01G377 Micromonas commoda
MD04G1184100 Malus domestica
MD12G1197300 Malus domestica
Medtr1g085150 Medicago truncatula
MELO3C015227.2 Cucumis melo
Migut.B00906 Erythranthe guttata
Migut.M00397 Erythranthe guttata
MSTRG.20349 Avicennia marina
Nitab4.5_0000081g0080 Nicotiana tabacum
Nitab4.5_0000081g0090 Nicotiana tabacum
Nitab4.5_0000094g0100 Nicotiana tabacum
Nitab4.5_0002058g0130 Nicotiana tabacum
Nitab4.5_0010734g0030 Nicotiana tabacum
Nn5g27909 Nelumbo nucifera
Oeu016867.2 Olea europaea
Oeu036211.1 Olea europaea
Os01g0271200 Oryza sativa ssp. japonica
Os10g0369000 Oryza sativa ssp. japonica
Peaxi162Scf00194g00519 Petunia axillaris
Peaxi162Scf01168g00117 Petunia axillaris
PGR031G2140 Punica granatum
PGSC0003DMG400018234 Solanum tuberosum
Phvul.007G206700 Phaseolus vulgaris
Potri.005G001200 Populus trichocarpa
Potri.013G000400 Populus trichocarpa
Pp3c12_18480 Physcomitrium patens
Pp3c12_18499 Physcomitrium patens
Pp3c16_22910 Physcomitrium patens
Pp3c21_16770 Physcomitrium patens
Pp3c23_15390 Physcomitrium patens
Pp3c25_11910 Physcomitrium patens
PRCOL_00004024 Prasinoderma coloniale
Prupe.6G302600 Prunus persica
Prupe.8G045400 Prunus persica
Psat6g156560 Pisum sativum
PSO210G7682 Papaver somniferum
PSO761G0062 Papaver somniferum
PSO832G1810 Papaver somniferum
QL03p011380 Quercus lobata
QL10p054086 Quercus lobata
RcHm_v2.0_Chr1g0323471 Rosa chinensis
RcHm_v2.0_Chr1g0323481 Rosa chinensis
RcHm_v2.0_Chr1g0323531 Rosa chinensis
RcHm_v2.0_Chr1g0330311 Rosa chinensis
RcHm_v2.0_Chr1g0330321 Rosa chinensis
RcHm_v2.0_Chr1g0330421 Rosa chinensis
RcHm_v2.0_Chr1g0330431 Rosa chinensis
RcHm_v2.0_Chr3g0459011 Rosa chinensis
Rhsim05G0125800 Rhododendron simsii
Rhsim07G0218400 Rhododendron simsii
Rhsim07G0219000 Rhododendron simsii
Rhsim13G0180500 Rhododendron simsii
Sabra05G0013500 Salix brachista
SalBow5G0363 Salvia bowleyana
Sc17g0001590 Simmondsia chinensis
Sed0003328 Sechium edule
SEGI_10376 Sequoiadendron giganteum
SEGI_33092 Sequoiadendron giganteum
SGA_v2.0_scaffold131G34491 Striga asiatica
SGA_v2.0_scaffold279G46767 Striga asiatica
SMO270G0106 Selaginella moellendorffii
Solyc01g102410.3 Solanum lycopersicum
Sopen01g044860 Solanum pennellii
Sp2g21350 Schrenkiella parvula
TAR362G0842 Trochodendron aralioides
TAR371G0546 Trochodendron aralioides
TAR371G1131 Trochodendron aralioides
TAR633G0439 Trochodendron aralioides
TAR633G1213 Trochodendron aralioides
TAR633G2641 Trochodendron aralioides
THA.LOC104818766 Tarenaya hassleriana
Thecc.05G331200 Theobroma cacao
Thhalv10003717m.g Eutrema salsugineum
TPR.G30555 Trifolium pratense
TPR.G34896 Trifolium pratense
TWI12G0542 Tripterygium wilfordii
TWI12G1424 Tripterygium wilfordii
unitig_21.g20714 Utricularia gibba
unitig_21.g20715 Utricularia gibba
vmacro04605 Vaccinium macrocarpon
vmacro19804 Vaccinium macrocarpon
VMungo0720G1669 Vigna mungo
Zm00001eb003350 Zea mays
Zm00001eb402830 Zea mays

User provided reference genes

Program Settings