Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p40820 Brassica napus
A09p33280 Brassica napus
Aa31LG2G4850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2371 Anthoceros agrestis
Actinidia10158 Actinidia chinensis
Ah.10g030250 Amaranthus hybridus
Ah.10g030260 Amaranthus hybridus
Ah.12g062820 Amaranthus hybridus
AL5G17390 Arabidopsis lyrata
Aqoxy2G00379 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0D01QN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.94DDXG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BSUN0E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KNHX6J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NR3S8D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XP2WR0 Arachis hypogaea
AT3G27890 Arabidopsis thaliana
ATR0745G009 Amborella trichopoda
Atru.chr12.1326 Acer truncatum
AUR62026856 Chenopodium quinoa
AUR62026857 Chenopodium quinoa
AUR62032644 Chenopodium quinoa
AUR62032645 Chenopodium quinoa
BcaC06g30954 Brassica carinata
BcaC06g33775 Brassica carinata
BolC7t44218H Brassica oleracea
BraA06t27003Z Brassica rapa
BraA09t38874Z Brassica rapa
C07p37060 Brassica napus
CAN.G1045.26 Capsicum annuum
CAN.G1045.27 Capsicum annuum
CAN.G1045.33 Capsicum annuum
CAN.G1045.34 Capsicum annuum
CANSAT56G0675 Cannabis sativa
CANSAT56G2823 Cannabis sativa
CARHR149400 Cardamine hirsuta
Carub.0005s0644 Capsella rubella
Carub.0005s0645 Capsella rubella
Carub.0005s0646 Capsella rubella
Ca_04528_v3 Cicer arietinum L.
Ca_14301_v3 Cicer arietinum L.
Cc00_g08720 Coffea canephora
Cc02_g12990 Coffea canephora
Cc02_g13000 Coffea canephora
Cc02_g27980 Coffea canephora
Cfa010921 Carpinus fangiana
Ciclev10002554m.g Citrus clementina
CiPaw.13G014100 Carya illinoinensis
CiPaw.13G014200 Carya illinoinensis
CiPaw.13G014300 Carya illinoinensis
CiPaw.14G007900 Carya illinoinensis
CiPaw.14G008000 Carya illinoinensis
ClCG01G007550 Citrullus lanatus
ClCG05G026850 Citrullus lanatus
COL.COLO4_20663 Corchorus olitorius
COL.COLO4_20664 Corchorus olitorius
COL.COLO4_20665 Corchorus olitorius
Cpa.g.sc540.2 Carica papaya
CsaV3_5G024520 Cucumis sativus L.
CsaV3_5G036800 Cucumis sativus L.
CSS0024062 Camellia sinensis var. sinensis
CSS0037018 Camellia sinensis var. sinensis
DCAR_022339 Daucus carota
DCAR_022340 Daucus carota
Dinv19756 Davidia involucrata
Dinv19757 Davidia involucrata
Duzib106G0524 Durio zibethinus
Duzib114G0079 Durio zibethinus
ECA232G1603 Erigeron canadensis
ECA238G4486 Erigeron canadensis
ECA238G4720 Erigeron canadensis
EL10Ac2g02796 Beta vulgaris
EL10Ac2g02798 Beta vulgaris
Eucgr.G01033 Eucalyptus grandis
Eucgr.G01034 Eucalyptus grandis
Eucgr.J01178 Eucalyptus grandis
FAN03G1817 Fragaria x ananassa
FAN06G1382 Fragaria x ananassa
FAN06G3945 Fragaria x ananassa
FAN10G2787 Fragaria x ananassa
FAN10G3949 Fragaria x ananassa
FvH4_7g03210 Fragaria vesca
FvH4_7g03220 Fragaria vesca
Glyma.04G140400 Glycine max
Glyma.11G152400 Glycine max
Glyma.13G196500 Glycine max
Glyma.13G196600 Glycine max
Gohir.A05G282000 Gossypium hirsutum
Gohir.A05G400200 Gossypium hirsutum
Gohir.A05G400400 Gossypium hirsutum
Gohir.D04G015600 Gossypium hirsutum
Gohir.D04G015633 Gossypium hirsutum
Gohir.D04G015700 Gossypium hirsutum
Gohir.D05G283200 Gossypium hirsutum
Gohir.D13G034566 Gossypium hirsutum
Gorai.009G297600 Gossypium raimondii
Gorai.012G018100 Gossypium raimondii
Gorai.012G018200 Gossypium raimondii
Gorai.013G039100 Gossypium raimondii
GSVIVG01013481001 Vitis vinifera
GSVIVG01036674001 Vitis vinifera
GSVIVG01036676001 Vitis vinifera
HanXRQChr06g0170501 Helianthus annuus
HanXRQChr09g0266971 Helianthus annuus
HanXRQChr10g0305101 Helianthus annuus
Haze_03028 Corylus avellana
Haze_03033 Corylus avellana
Hma1.2p1_1202F.1_g266860 Hydrangea macrophylla
HPP92_013976 Vanilla planifolia
HPP92_016054 Vanilla planifolia
Hund13364 Selenicereus undatus
Hund15739 Selenicereus undatus
Hund15740 Selenicereus undatus
Lalb_Chr01g0007321 Lupinus albus
Lalb_Chr03g0032051 Lupinus albus
Lj3g0006377 Lotus japonicus
Lj3g0028018 Lotus japonicus
Lj9A660G56 Lonicera japonica
Lsat_1_v5_gn_1_109360 Lactuca sativa
Lsat_1_v5_gn_1_109380 Lactuca sativa
Lsat_1_v5_gn_4_133401 Lactuca sativa
Lsat_1_v5_gn_7_115741 Lactuca sativa
Manes.04G158700 Manihot esculenta
Manes.04G158800 Manihot esculenta
Manes.04G158900 Manihot esculenta
Manes.04G159000 Manihot esculenta
Manes.11G005600 Manihot esculenta
Manes.11G005700 Manihot esculenta
Mapoly0010s0019 Marchantia polymorpha
MBI13_g23553_MAGBIO Magnolia biondii
MBI13_g41607_MAGBIO Magnolia biondii
MD02G1284500 Malus domestica
MD02G1284800 Malus domestica
MD02G1285200 Malus domestica
MD07G1050400 Malus domestica
Medtr3g019090 Medicago truncatula
Medtr3g019120 Medicago truncatula
Medtr3g019150 Medicago truncatula
Medtr3g019160 Medicago truncatula
Medtr8g039090 Medicago truncatula
MELO3C005147.2 Cucumis melo
MELO3C012476.2 Cucumis melo
Migut.N01849 Erythranthe guttata
MSTRG.28035 Avicennia marina
MSTRG.5068 Avicennia marina
Nitab4.5_0000307g0320 Nicotiana tabacum
Nitab4.5_0000307g0330 Nicotiana tabacum
Nitab4.5_0013519g0010 Nicotiana tabacum
Nitab4.5_0014681g0010 Nicotiana tabacum
Nn7g36706 Nelumbo nucifera
Nn7g36707 Nelumbo nucifera
Oeu014634.1 Olea europaea
Os01g0953600 Oryza sativa ssp. japonica
Os01g0954000 Oryza sativa ssp. japonica
Peaxi162Scf00082g00216 Petunia axillaris
Peaxi162Scf00082g00217 Petunia axillaris
PGR031G0826 Punica granatum
PGR031G1640 Punica granatum
PGSC0003DMG400005404 Solanum tuberosum
PGSC0003DMG400005410 Solanum tuberosum
Phvul.005G030700 Phaseolus vulgaris
Phvul.005G030800 Phaseolus vulgaris
Potri.001G028000 Populus trichocarpa
Potri.003G195700 Populus trichocarpa
Potri.003G195900 Populus trichocarpa
PRCOL_00002786 Prasinoderma coloniale
Prupe.2G038000 Prunus persica
Prupe.2G038100 Prunus persica
Prupe.2G038200 Prunus persica
Prupe.2G038400 Prunus persica
Psat4g146000 Pisum sativum
Psat5g221480 Pisum sativum
PSO339G0706 Papaver somniferum
PSO384G1503 Papaver somniferum
QL04p016216 Quercus lobata
QL04p016236 Quercus lobata
QL04p016315 Quercus lobata
QL04p016324 Quercus lobata
QL04p016336 Quercus lobata
QL04p016561 Quercus lobata
QL04p016584 Quercus lobata
QL04p016616 Quercus lobata
QL04p016638 Quercus lobata
QL04p016649 Quercus lobata
QL04p016651 Quercus lobata
RcHm_v2.0_Chr1g0325161 Rosa chinensis
RcHm_v2.0_Chr1g0325181 Rosa chinensis
RcHm_v2.0_Chr1g0325221 Rosa chinensis
Rhsim06G0066200 Rhododendron simsii
Rhsim07G0067300 Rhododendron simsii
Sabra01G0020400 Salix brachista
Sabra03G0146100 Salix brachista
SalBow6G1970 Salvia bowleyana
Sc11g0006470 Simmondsia chinensis
Sc11g0006480 Simmondsia chinensis
Sc14g0005220 Simmondsia chinensis
Sed0003212 Sechium edule
Sed0025583 Sechium edule
SEGI_21732 Sequoiadendron giganteum
SEGI_28470 Sequoiadendron giganteum
SEGI_38954 Sequoiadendron giganteum
SGA_v2.0_scaffold232G43500 Striga asiatica
SMO196G0101 Selaginella moellendorffii
Solyc01g096420.3 Solanum lycopersicum
Solyc01g096430.4 Solanum lycopersicum
Sopen01g040150 Solanum pennellii
Sopen01g040160 Solanum pennellii
Sp2g16950 Schrenkiella parvula
TAR636G1888 Trochodendron aralioides
TAR636G2999 Trochodendron aralioides
THA.LOC104826729 Tarenaya hassleriana
Thecc.10G154000 Theobroma cacao
Thhalv10004956m.g Eutrema salsugineum
TPR.G30438 Trifolium pratense
TPR.G9877 Trifolium pratense
TWI15G0995 Tripterygium wilfordii
TWI63G0642 Tripterygium wilfordii
TWI63G1060 Tripterygium wilfordii
unitig_0.g2290 Utricularia gibba
vmacro13754 Vaccinium macrocarpon
vmacro21401 Vaccinium macrocarpon
VMungo1080G0877 Vigna mungo
VMungo1080G1762 Vigna mungo
Zm00001eb140660 Zea mays
Zm00001eb362760 Zea mays
Zm00001eb394340 Zea mays

User provided reference genes

Program Settings