Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p07070 Brassica napus
Aa31LG7G2260 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4533 Anthoceros agrestis
Actinidia32183 Actinidia chinensis
Ah.01g009880 Amaranthus hybridus
Ah.01g009920 Amaranthus hybridus
Ah.01g018170 Amaranthus hybridus
Ah.01g018180 Amaranthus hybridus
AL1G29730 Arabidopsis lyrata
AL2G17610 Arabidopsis lyrata
Aqoxy4G01956 Aquilegia oxysepala
Aqoxy4G01957 Aquilegia oxysepala
Aqoxy7G01394 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8DY1VB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MA4BJF Arachis hypogaea
AT1G17450 Arabidopsis thaliana
AT1G58766 Arabidopsis thaliana
AT1G59077 Arabidopsis thaliana
AT1G59453 Arabidopsis thaliana
AT1G59460 Arabidopsis thaliana
AT1G59470 Arabidopsis thaliana
ATR0568G030 Amborella trichopoda
ATR0618G078 Amborella trichopoda
Atru.chr1.3951 Acer truncatum
Atru.chr4.3098 Acer truncatum
AUR62010285 Chenopodium quinoa
AUR62039104 Chenopodium quinoa
BcaB06g26734 Brassica carinata
BcaC06g34331 Brassica carinata
BcaC06g35804 Brassica carinata
BolC7t41532H Brassica oleracea
BolC7t43569H Brassica oleracea
BraA07t28494Z Brassica rapa
C07p10660 Brassica napus
C07p30270 Brassica napus
CAN.G397.51 Capsicum annuum
CAN.G397.52 Capsicum annuum
CAN.G947.7 Capsicum annuum
CANSAT54G2721 Cannabis sativa
CARHR018040 Cardamine hirsuta
CARHR117350 Cardamine hirsuta
Carub.0001s1721 Capsella rubella
Carub.0002s0593 Capsella rubella
Ca_13957_v3 Cicer arietinum L.
Cc02_g14940 Coffea canephora
CDE02G2049 Ceratophyllum demersum
Cfa003537 Carpinus fangiana
Cfa003558 Carpinus fangiana
Ciclev10024687m.g Citrus clementina
CiPaw.01G219300 Carya illinoinensis
CiPaw.01G219400 Carya illinoinensis
ClCG05G007230 Citrullus lanatus
COL.COLO4_27975 Corchorus olitorius
COL.COLO4_30697 Corchorus olitorius
COL.COLO4_30698 Corchorus olitorius
COL.COLO4_30699 Corchorus olitorius
COL.COLO4_30764 Corchorus olitorius
COL.COLO4_38602 Corchorus olitorius
Cpa.g.sc34.70 Carica papaya
Cpa.g.sc34.72 Carica papaya
Cpa.g.sc34.76 Carica papaya
Cre12.g518107 Chlamydomonas reinhardtii
CsaV3_3G015990 Cucumis sativus L.
CSS0043728 Camellia sinensis var. sinensis
CSS0047313 Camellia sinensis var. sinensis
DCAR_016128 Daucus carota
DCAR_022697 Daucus carota
Dinv04036 Davidia involucrata
Dinv30672 Davidia involucrata
Dinv30673 Davidia involucrata
Dinv34332 Davidia involucrata
Dinv34333 Davidia involucrata
Duzib192G0334 Durio zibethinus
Duzib235G1299 Durio zibethinus
ECA240G4395 Erigeron canadensis
ECA247G3059 Erigeron canadensis
EL10Ac9g22289 Beta vulgaris
Eucgr.J02821 Eucalyptus grandis
FAN02G4452 Fragaria x ananassa
FAN05G1938 Fragaria x ananassa
FAN09G2022 Fragaria x ananassa
FAN14G5519 Fragaria x ananassa
FAN15G1247 Fragaria x ananassa
FAN24G1542 Fragaria x ananassa
FAN27G1917 Fragaria x ananassa
FvH4_2g23920 Fragaria vesca
FvH4_6g34630 Fragaria vesca
Glyma.02G000100 Glycine max
Glyma.12G000400 Glycine max
Glyma.16G219900 Glycine max
Glyma.17G219802 Glycine max
Glyma.19G019300 Glycine max
Glyma.19G263900 Glycine max
Gohir.A01G106450 Gossypium hirsutum
Gohir.A05G405950 Gossypium hirsutum
Gohir.A06G192400 Gossypium hirsutum
Gohir.D01G092950 Gossypium hirsutum
Gohir.D04G009700 Gossypium hirsutum
Gohir.D06G200300 Gossypium hirsutum
Gorai.002G118300 Gossypium raimondii
Gorai.010G233800 Gossypium raimondii
Gorai.012G011500 Gossypium raimondii
GSVIVG01001689001 Vitis vinifera
GSVIVG01016771001 Vitis vinifera
HanXRQChr10g0301861 Helianthus annuus
Haze_15990 Corylus avellana
Haze_16025 Corylus avellana
HPP92_011313 Vanilla planifolia
HPP92_011314 Vanilla planifolia
Lalb_Chr10g0094381 Lupinus albus
Lalb_Chr10g0094391 Lupinus albus
Lalb_Chr10g0094641 Lupinus albus
Lj3g0017600 Lotus japonicus
Lj5C38T4 Lonicera japonica
Lj7C292T8 Lonicera japonica
Lsat_1_v5_gn_1_38040 Lactuca sativa
Lsat_1_v5_gn_5_75740 Lactuca sativa
Manes.11G021000 Manihot esculenta
Mapoly0002s0195 Marchantia polymorpha
MBI06_g12843_MAGBIO Magnolia biondii
MBI06_g22353_MAGBIO Magnolia biondii
MBI06_g44919_MAGBIO Magnolia biondii
MCO16G007 Micromonas commoda
MD09G1184300 Malus domestica
MD11G1308600 Malus domestica
Medtr3g005240 Medicago truncatula
MELO3C006797.2 Cucumis melo
Migut.E00647 Erythranthe guttata
Migut.I01069 Erythranthe guttata
MSTRG.10956 Avicennia marina
Nitab4.5_0000794g0160 Nicotiana tabacum
Nitab4.5_0010825g0010 Nicotiana tabacum
Nitab4.5_0010825g0020 Nicotiana tabacum
Nn7g36584 Nelumbo nucifera
Oeu007563.1 Olea europaea
Oeu058725.1 Olea europaea
Os02g0316900 Oryza sativa ssp. japonica
Os02g0633100 Oryza sativa ssp. japonica
Os05g0569900 Oryza sativa ssp. japonica
Peaxi162Scf00006g00026 Petunia axillaris
Peaxi162Scf00006g00210 Petunia axillaris
Peaxi162Scf00006g00211 Petunia axillaris
Peaxi162Scf00068g02519 Petunia axillaris
Peaxi162Scf00559g00315 Petunia axillaris
PGR102G0955 Punica granatum
PGSC0003DMG401008881 Solanum tuberosum
Phvul.007G234600 Phaseolus vulgaris
Phvul.011G011400 Phaseolus vulgaris
Potri.001G170001 Populus trichocarpa
Potri.003G064000 Populus trichocarpa
Pp3c4_16500 Physcomitrium patens
Prupe.3G042500 Prunus persica
Prupe.8G262800 Prunus persica
Psat0s1819g0040 Pisum sativum
Psat1g003120 Pisum sativum
Psat5g267240 Pisum sativum
PSO017G0852 Papaver somniferum
PSO017G1278 Papaver somniferum
PSO017G1981 Papaver somniferum
PSO210G1276 Papaver somniferum
PSO210G6259 Papaver somniferum
PSO447G0254 Papaver somniferum
PSO478G1045 Papaver somniferum
PSO700G0258 Papaver somniferum
QL05p007828 Quercus lobata
QL10p018850 Quercus lobata
RcHm_v2.0_Chr2g0145161 Rosa chinensis
RcHm_v2.0_Chr6g0291541 Rosa chinensis
RcHm_v2.0_Chr6g0291551 Rosa chinensis
Rhsim08G0220000 Rhododendron simsii
Rhsim08G0238100 Rhododendron simsii
Sabra01G0141400 Salix brachista
Sabra03G0037600 Salix brachista
SalBow6G7155 Salvia bowleyana
Sc18g0005650 Simmondsia chinensis
Sed0027017 Sechium edule
SEGI_00337 Sequoiadendron giganteum
SEGI_00835 Sequoiadendron giganteum
SEGI_12678 Sequoiadendron giganteum
SEGI_18101 Sequoiadendron giganteum
SEGI_18157 Sequoiadendron giganteum
SEGI_24169 Sequoiadendron giganteum
SEGI_24599 Sequoiadendron giganteum
SEGI_32279 Sequoiadendron giganteum
SGA_v2.0_scaffold71G23857 Striga asiatica
SHI10580 Sapria himalayana
SMO119G0293 Selaginella moellendorffii
SMO196G0130 Selaginella moellendorffii
Solyc09g009800.3 Solanum lycopersicum
Sopen09g004560 Solanum pennellii
Sp3g22890 Schrenkiella parvula
TAR626G1632 Trochodendron aralioides
THA.LOC104813957 Tarenaya hassleriana
Thecc.06G115400 Theobroma cacao
Thecc.06G119100 Theobroma cacao
Thhalv10017997m.g Eutrema salsugineum
TPR.G14700 Trifolium pratense
TPR.G14707 Trifolium pratense
TPR.G25535 Trifolium pratense
TWI31G0627 Tripterygium wilfordii
TWI31G0668 Tripterygium wilfordii
unitig_26.g8927 Utricularia gibba
vmacro15024 Vaccinium macrocarpon
vmacro15025 Vaccinium macrocarpon
vmacro15026 Vaccinium macrocarpon
vmacro15027 Vaccinium macrocarpon
vmacro15028 Vaccinium macrocarpon
vmacro15029 Vaccinium macrocarpon
VMungo0540G1895 Vigna mungo
VMungo1215G1333 Vigna mungo
VMungo1309G1116 Vigna mungo
Zm00001eb011340 Zea mays
Zm00001eb047190 Zea mays
Zm00001eb247930 Zea mays
Zm00001eb247940 Zea mays
Zm00001eb247960 Zea mays
Zm00001eb247970 Zea mays
Zm00001eb247980 Zea mays
Zm00001eb254630 Zea mays
Zm00001eb254640 Zea mays
Zm00001eb254650 Zea mays
Zm00001eb254660 Zea mays
Zm00001eb254680 Zea mays
Zm00001eb254710 Zea mays
Zm00001eb254720 Zea mays
Zm00001eb254750 Zea mays
Zm00001eb254760 Zea mays
Zm00001eb254770 Zea mays
Zm00001eb254780 Zea mays
Zm00001eb254790 Zea mays
Zm00001eb254800 Zea mays
Zm00001eb254840 Zea mays

User provided reference genes

Program Settings