Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p01440 Brassica napus
A07p16350 Brassica napus
Aa31LG8G16340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2680 Anthoceros agrestis
Actinidia06176 Actinidia chinensis
Actinidia07937 Actinidia chinensis
Actinidia25392 Actinidia chinensis
Actinidia25393 Actinidia chinensis
Actinidia29954 Actinidia chinensis
Actinidia38497 Actinidia chinensis
Ah.09g229420 Amaranthus hybridus
Ah.09g229430 Amaranthus hybridus
AL5G18050 Arabidopsis lyrata
Aqoxy7G02883 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0Q74GS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0X8X9Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2Y2T3J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.32QIWM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4V0AV8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AN3HGT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EY467D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H816KI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HKST4K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J6USTV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MZE1GT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T9T9C4 Arachis hypogaea
AT3G28430 Arabidopsis thaliana
ATR0580G026 Amborella trichopoda
ATR0772G085 Amborella trichopoda
Atru.chr7.937 Acer truncatum
Atru.chr8.1386 Acer truncatum
AUR62027417 Chenopodium quinoa
AUR62031276 Chenopodium quinoa
BcaB03g14394 Brassica carinata
BcaB03g16719 Brassica carinata
BcaB08g34852 Brassica carinata
BcaC06g36561 Brassica carinata
BolC7t40687H Brassica oleracea
BolC7t42928H Brassica oleracea
BraA07t27938Z Brassica rapa
BraA07t27939Z Brassica rapa
BraA07t29362Z Brassica rapa
C07p02900 Brassica napus
C07p24030 Brassica napus
CAN.G32.3 Capsicum annuum
CANSAT01G1287 Cannabis sativa
CANSAT21G1454 Cannabis sativa
CANSAT64G1472 Cannabis sativa
CARHR292530 Cardamine hirsuta
Carub.0005s0694 Capsella rubella
Carub.0005s0695 Capsella rubella
Ca_02121_v3 Cicer arietinum L.
Ca_11716_v3 Cicer arietinum L.
Ca_21260_v3 Cicer arietinum L.
CBR_g9125 Chara braunii
Cc06_g06410 Coffea canephora
Cc06_g17430 Coffea canephora
CDE02G4171 Ceratophyllum demersum
CDE05G1903 Ceratophyllum demersum
CDE05G2650 Ceratophyllum demersum
CDE05G2761 Ceratophyllum demersum
Cfa013462 Carpinus fangiana
Cfa016675 Carpinus fangiana
Ciclev10007425m.g Citrus clementina
Ciclev10011126m.g Citrus clementina
CiPaw.02G031800 Carya illinoinensis
CiPaw.07G198300 Carya illinoinensis
CiPaw.10G016000 Carya illinoinensis
ClCG11G011660 Citrullus lanatus
COL.COLO4_23445 Corchorus olitorius
COL.COLO4_29595 Corchorus olitorius
Cpa.g.sc104.51 Carica papaya
Cpa.g.sc104.54 Carica papaya
Cpa.g.sc115.66 Carica papaya
Cre12.g515250 Chlamydomonas reinhardtii
CsaV3_2G008810 Cucumis sativus L.
CSS0009413 Camellia sinensis var. sinensis
CSS0013758 Camellia sinensis var. sinensis
DCAR_014676 Daucus carota
Dinv12331 Davidia involucrata
Dinv25450 Davidia involucrata
Dinv41190 Davidia involucrata
Duzib093G0565 Durio zibethinus
Duzib150G0495 Durio zibethinus
ECA240G1792 Erigeron canadensis
EL10Ac7g16807 Beta vulgaris
EL10Ac8g19298 Beta vulgaris
Eucgr.A02600 Eucalyptus grandis
Eucgr.C00100 Eucalyptus grandis
FAN02G4506 Fragaria x ananassa
FAN05G1787 Fragaria x ananassa
FAN05G2915 Fragaria x ananassa
FAN07G2391 Fragaria x ananassa
FAN09G1177 Fragaria x ananassa
FAN12G2043 Fragaria x ananassa
FAN14G0567 Fragaria x ananassa
FAN17G1204 Fragaria x ananassa
FAN22G0487 Fragaria x ananassa
FvH4_4g07030 Fragaria vesca
FvH4_6g20080 Fragaria vesca
Glyma.02G198100 Glycine max
Glyma.09G060600 Glycine max
Glyma.10G078700 Glycine max
Glyma.10G078851 Glycine max
Glyma.15G167100 Glycine max
Gohir.A09G135300 Gossypium hirsutum
Gohir.A13G207800 Gossypium hirsutum
Gohir.D09G131900 Gossypium hirsutum
Gohir.D13G212300 Gossypium hirsutum
Gorai.006G150500 Gossypium raimondii
Gorai.013G242600 Gossypium raimondii
GSVIVG01029303001 Vitis vinifera
GSVIVG01033943001 Vitis vinifera
HanXRQChr03g0065421 Helianthus annuus
HanXRQChr03g0065431 Helianthus annuus
HanXRQChr03g0065441 Helianthus annuus
HanXRQChr09g0245381 Helianthus annuus
Haze_19692 Corylus avellana
Haze_22041 Corylus avellana
Hma1.2p1_0235F.1_g098720 Hydrangea macrophylla
HPP92_015379 Vanilla planifolia
Hund03837 Selenicereus undatus
Hund03839 Selenicereus undatus
Hund12689 Selenicereus undatus
Hund12691 Selenicereus undatus
Hund12692 Selenicereus undatus
Lalb_Chr07g0180711 Lupinus albus
Lalb_Chr13g0299871 Lupinus albus
Lalb_Chr13g0299881 Lupinus albus
Lj1C1049T3 Lonicera japonica
Lj1C1049T5 Lonicera japonica
Lj4g0023754 Lotus japonicus
Lj5g0011168 Lotus japonicus
Lj5P240T19 Lonicera japonica
Lj6g0025977 Lotus japonicus
Lju170C21T3 Lonicera japonica
Lsat_1_v5_gn_7_55800 Lactuca sativa
Manes.06G018200 Manihot esculenta
Manes.08G032200 Manihot esculenta
Mapoly0006s0005 Marchantia polymorpha
MBI01_g04531_MAGBIO Magnolia biondii
MBI07_g34228_MAGBIO Magnolia biondii
MBI14_g10721_MAGBIO Magnolia biondii
MBI16_g46830_MAGBIO Magnolia biondii
MCO09G665 Micromonas commoda
MD12G1037800 Malus domestica
MD13G1240300 Malus domestica
MD14G1036800 Malus domestica
Medtr1g057130 Medicago truncatula
Medtr2g038210 Medicago truncatula
Medtr4g127210 Medicago truncatula
MELO3C003959.2 Cucumis melo
Migut.J00788 Erythranthe guttata
MSTRG.5937 Avicennia marina
Nitab4.5_0001245g0040 Nicotiana tabacum
Nitab4.5_0006774g0010 Nicotiana tabacum
Nn6g34739 Nelumbo nucifera
Nn8g40677 Nelumbo nucifera
Oeu064560.1 Olea europaea
Os04g0298600 Oryza sativa ssp. japonica
Peaxi162Scf00231g00917 Petunia axillaris
Peaxi162Scf00231g00918 Petunia axillaris
PGR004G2265 Punica granatum
PGR142G2741 Punica granatum
Phvul.003G140400 Phaseolus vulgaris
Phvul.007G269200 Phaseolus vulgaris
Phvul.009G235200 Phaseolus vulgaris
Potri.006G073600 Populus trichocarpa
Potri.006G204600 Populus trichocarpa
Potri.018G140800 Populus trichocarpa
Pp3c16_8730 Physcomitrium patens
Pp3c5_16960 Physcomitrium patens
PRCOL_00003380 Prasinoderma coloniale
Prupe.1G073600 Prunus persica
Prupe.7G097500 Prunus persica
Psat1g143480 Pisum sativum
Psat2g063920 Pisum sativum
Psat4g013440 Pisum sativum
Psat6g084840 Pisum sativum
PSO063G0242 Papaver somniferum
PSO170G2574 Papaver somniferum
PSO384G1939 Papaver somniferum
QL02p047088 Quercus lobata
QL02p047151 Quercus lobata
QL07p037253 Quercus lobata
RcHm_v2.0_Chr3g0475531 Rosa chinensis
RcHm_v2.0_Chr4g0399151 Rosa chinensis
Rhsim03G0267600 Rhododendron simsii
Rhsim04G0130200 Rhododendron simsii
Sabra06G0054900 Salix brachista
Sabra06G0157600 Salix brachista
Sabra18G0115000 Salix brachista
Sc02g0000550 Simmondsia chinensis
Sc02g0000560 Simmondsia chinensis
Sc02g0000570 Simmondsia chinensis
Sc14g0003040 Simmondsia chinensis
Sed0020294 Sechium edule
SEGI_03548 Sequoiadendron giganteum
SEGI_10738 Sequoiadendron giganteum
SEGI_27054 Sequoiadendron giganteum
SGA_v2.0_scaffold112G31613 Striga asiatica
SHI39523 Sapria himalayana
SMO351G0145 Selaginella moellendorffii
SMO356G0480 Selaginella moellendorffii
Solyc07g018090.4 Solanum lycopersicum
Solyc07g018100.2 Solanum lycopersicum
Sopen07g007020 Solanum pennellii
Sp3g32670 Schrenkiella parvula
TAR633G2330 Trochodendron aralioides
THA.LOC104803958 Tarenaya hassleriana
THA.LOC104804523 Tarenaya hassleriana
THA.LOC104804524 Tarenaya hassleriana
THA.LOC104804525 Tarenaya hassleriana
THA.LOC104814647 Tarenaya hassleriana
Thecc.05G101800 Theobroma cacao
Thecc.09G188100 Theobroma cacao
Thhalv10022546m.g Eutrema salsugineum
TPR.G10382 Trifolium pratense
TPR.G31045 Trifolium pratense
TPR.G31863 Trifolium pratense
TPR.G33040 Trifolium pratense
TPR.G5387 Trifolium pratense
TPR.G7171 Trifolium pratense
unitig_26.g9160 Utricularia gibba
vmacro05990 Vaccinium macrocarpon
vmacro08846 Vaccinium macrocarpon
VMungo0475G0001 Vigna mungo
VMungo0720G0970 Vigna mungo
VMungo0720G2383 Vigna mungo
VMungo0720G2879 Vigna mungo
VMungo1215G0843 Vigna mungo
VMungo1309G2675 Vigna mungo
Zm00001eb420400 Zea mays

User provided reference genes

Program Settings