Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p02870 Brassica napus
A05p02790 Brassica napus
A07p23720 Brassica napus
A09p50750 Brassica napus
Aa31LG10G12600 Aethionema arabicum
Aa31LG1G24040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3254 Anthoceros agrestis
Actinidia09380 Actinidia chinensis
Actinidia17262 Actinidia chinensis
Actinidia20302 Actinidia chinensis
Actinidia20303 Actinidia chinensis
Actinidia20304 Actinidia chinensis
Actinidia38573 Actinidia chinensis
Ah.04g152270 Amaranthus hybridus
Ah.13g076050 Amaranthus hybridus
AL4G40590 Arabidopsis lyrata
AL5G39550 Arabidopsis lyrata
Aqoxy1G00183 Aquilegia oxysepala
Aqoxy2G00102 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5W6DG7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J02EN1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y6CTQQ Arachis hypogaea
AT2G42230 Arabidopsis thaliana
AT3G57890 Arabidopsis thaliana
ATR0605G131 Amborella trichopoda
Atru.chr6.1978 Acer truncatum
AUR62012070 Chenopodium quinoa
AUR62024331 Chenopodium quinoa
BcaB02g07568 Brassica carinata
BcaB02g08290 Brassica carinata
BcaC02g09969 Brassica carinata
BcaC02g12470 Brassica carinata
BcaC07g40162 Brassica carinata
BcaC07g40331 Brassica carinata
BcaC08g44876 Brassica carinata
BcaNung04401 Brassica carinata
BcaNung05886 Brassica carinata
BcaNung06253 Brassica carinata
BcaNung06935 Brassica carinata
BolC4t21975H Brassica oleracea
BolC4t25010H Brassica oleracea
BolC6t37647H Brassica oleracea
BolC8t50944H Brassica oleracea
BolC9t56611H Brassica oleracea
BraA04t16010Z Brassica rapa
BraA05t19271Z Brassica rapa
BraA07t30024Z Brassica rapa
BraA09t40522Z Brassica rapa
C03p68640 Brassica napus
C04p03380 Brassica napus
C04p34480 Brassica napus
C06p24950 Brassica napus
C08p33460 Brassica napus
C09p37780 Brassica napus
CAN.G128.34 Capsicum annuum
CAN.G1856.2 Capsicum annuum
CANSAT64G0379 Cannabis sativa
CARHR137270 Cardamine hirsuta
CARHR168200 Cardamine hirsuta
Carub.0004s2457 Capsella rubella
Carub.0005s2474 Capsella rubella
Ca_08504_v3 Cicer arietinum L.
Ca_12097_v3 Cicer arietinum L.
CBR_g6746 Chara braunii
Cc00_g14580 Coffea canephora
CDE04G3643 Ceratophyllum demersum
CDE07G1749 Ceratophyllum demersum
Ciclev10031101m.g Citrus clementina
CiPaw.09G032300 Carya illinoinensis
CiPaw.10G028200 Carya illinoinensis
ClCG04G002320 Citrullus lanatus
COL.COLO4_36131 Corchorus olitorius
Cpa.g.sc85.91 Carica papaya
Cre09.g394880 Chlamydomonas reinhardtii
CsaV3_4G030440 Cucumis sativus L.
CSS0004843 Camellia sinensis var. sinensis
CSS0016933 Camellia sinensis var. sinensis
DCAR_013559 Daucus carota
DCAR_017027 Daucus carota
Dinv14272 Davidia involucrata
Dinv24093 Davidia involucrata
Duzib093G0113 Durio zibethinus
Duzib106G0869 Durio zibethinus
Duzib128G1407 Durio zibethinus
ECA247G0776 Erigeron canadensis
ECA247G3861 Erigeron canadensis
ECA248G1145 Erigeron canadensis
EL10Ac3g06951 Beta vulgaris
Eucgr.K01823 Eucalyptus grandis
FAN02G1106 Fragaria x ananassa
FAN05G3407 Fragaria x ananassa
FAN09G3005 Fragaria x ananassa
FAN14G0710 Fragaria x ananassa
FAN14G3985 Fragaria x ananassa
FvH4_6g22720 Fragaria vesca
Glyma.03G142600 Glycine max
Glyma.03G142700 Glycine max
Glyma.19G145500 Glycine max
Glyma.19G145600 Glycine max
Gohir.A01G137656 Gossypium hirsutum
Gohir.A01G194500 Gossypium hirsutum
Gohir.A04G058700 Gossypium hirsutum
Gohir.A09G126600 Gossypium hirsutum
Gohir.D01G126200 Gossypium hirsutum
Gohir.D01G184700 Gossypium hirsutum
Gohir.D04G088800 Gossypium hirsutum
Gohir.D09G123232 Gossypium hirsutum
Gorai.002G156800 Gossypium raimondii
Gorai.002G228100 Gossypium raimondii
Gorai.006G141400 Gossypium raimondii
Gorai.013G212400 Gossypium raimondii
GSVIVG01033527001 Vitis vinifera
HanXRQChr01g0009711 Helianthus annuus
HanXRQChr10g0295711 Helianthus annuus
HanXRQChr13g0389301 Helianthus annuus
Haze_19959 Corylus avellana
Haze_19960 Corylus avellana
Hma1.2p1_0812F.1_g222320 Hydrangea macrophylla
HPP92_003002 Vanilla planifolia
HPP92_015466 Vanilla planifolia
HPP92_027524 Vanilla planifolia
HPP92_027525 Vanilla planifolia
Hund19188 Selenicereus undatus
Hund24784 Selenicereus undatus
Lalb_Chr04g0259641 Lupinus albus
Lalb_Chr15g0078891 Lupinus albus
Lalb_Chr15g0078901 Lupinus albus
Lalb_Chr18g0047721 Lupinus albus
Lj1g0008821 Lotus japonicus
Lj2A372T36 Lonicera japonica
Lj5g0015442 Lotus japonicus
Lju124A31T60 Lonicera japonica
Lsat_1_v5_gn_5_164160 Lactuca sativa
Lsat_1_v5_gn_9_27960 Lactuca sativa
Manes.06G161950 Manihot esculenta
Manes.07G080701 Manihot esculenta
Manes.08G046600 Manihot esculenta
Manes.09G032000 Manihot esculenta
Manes.10G108000 Manihot esculenta
Mapoly0075s0058 Marchantia polymorpha
MBI01_g15752_MAGBIO Magnolia biondii
MCO03G429 Micromonas commoda
MD12G1061200 Malus domestica
MD14G1060900 Malus domestica
Medtr1g053360 Medicago truncatula
Medtr7g078290 Medicago truncatula
Medtr7g092810 Medicago truncatula
MELO3C008901.2 Cucumis melo
Migut.J01818 Erythranthe guttata
Migut.K00052 Erythranthe guttata
MSTRG.6463 Avicennia marina
MSTRG.6464 Avicennia marina
Nitab4.5_0000016g0260 Nicotiana tabacum
Nitab4.5_0002841g0010 Nicotiana tabacum
Nitab4.5_0003572g0060 Nicotiana tabacum
Nitab4.5_0007123g0030 Nicotiana tabacum
Nitab4.5_0016513g0010 Nicotiana tabacum
Nn2g15576 Nelumbo nucifera
Nn7g36061 Nelumbo nucifera
Oeu008115.1 Olea europaea
Oeu033747.1 Olea europaea
Oeu052342.1 Olea europaea
Os06g0614300 Oryza sativa ssp. japonica
Peaxi162Scf00258g00123 Petunia axillaris
Peaxi162Scf00406g01118 Petunia axillaris
PGR142G0298 Punica granatum
Phvul.001G140300 Phaseolus vulgaris
Phvul.001G140500 Phaseolus vulgaris
Potri.006G059100 Populus trichocarpa
Potri.016G049000 Populus trichocarpa
Pp3c11_21950 Physcomitrium patens
Pp3c14_9980 Physcomitrium patens
Pp3c17_6530 Physcomitrium patens
Pp3c1_33530 Physcomitrium patens
Pp3c2_1770 Physcomitrium patens
PRCOL_00005924 Prasinoderma coloniale
Prupe.7G073500 Prunus persica
Psat3g069800 Pisum sativum
Psat6g118040 Pisum sativum
Psat7g097000 Pisum sativum
PSO266G0038 Papaver somniferum
PSO339G6234 Papaver somniferum
PSO339G6631 Papaver somniferum
PSO384G1923 Papaver somniferum
PSO541G4056 Papaver somniferum
PSO541G4619 Papaver somniferum
PSO675G6199 Papaver somniferum
QL07p023117 Quercus lobata
QL07p023124 Quercus lobata
RcHm_v2.0_Chr2g0135751 Rosa chinensis
RcHm_v2.0_Chr3g0480321 Rosa chinensis
Rhsim03G0009300 Rhododendron simsii
Sabra06G0042500 Salix brachista
Sabra16G0052800 Salix brachista
SalBow1G2225 Salvia bowleyana
SalBow1G2304 Salvia bowleyana
Sc13g0002110 Simmondsia chinensis
Sed0016805 Sechium edule
Sed0024316 Sechium edule
SEGI_11150 Sequoiadendron giganteum
SEGI_35780 Sequoiadendron giganteum
SEGI_37633 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30475 Striga asiatica
SGA_v2.0_scaffold273G46451 Striga asiatica
SGA_v2.0_scaffold94G28437 Striga asiatica
SHI16069 Sapria himalayana
SHI16074 Sapria himalayana
SMO353G0289 Selaginella moellendorffii
Solyc03g053120.1 Solanum lycopersicum
Solyc10g080440.2 Solanum lycopersicum
Sopen10g030980 Solanum pennellii
Sp4g24410 Schrenkiella parvula
Sp5g04830 Schrenkiella parvula
TAR362G0454 Trochodendron aralioides
TAR362G1138 Trochodendron aralioides
TAR633G0049 Trochodendron aralioides
THA.LOC104802444 Tarenaya hassleriana
THA.LOC104819801 Tarenaya hassleriana
THA.LOC104824463 Tarenaya hassleriana
Thecc.05G168100 Theobroma cacao
Thhalv10005862m.g Eutrema salsugineum
Thhalv10016442m.g Eutrema salsugineum
TPR.G24903 Trifolium pratense
TWI74G1631 Tripterygium wilfordii
TWI77G0483 Tripterygium wilfordii
vmacro07937 Vaccinium macrocarpon
vmacro09104 Vaccinium macrocarpon
VMungo1383G2267 Vigna mungo
VMungo1383G3623 Vigna mungo
Zm00001eb206030 Zea mays
Zm00001eb236410 Zea mays
Zm00001eb275750 Zea mays
Zm00001eb341800 Zea mays
Zm00001eb348330 Zea mays

User provided reference genes

Program Settings