Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16430 Brassica napus
A03p47090 Brassica napus
Aa31LG11G1920 Aethionema arabicum
Aa31LG7G10410 Aethionema arabicum
Actinidia01048 Actinidia chinensis
Actinidia12664 Actinidia chinensis
Actinidia13587 Actinidia chinensis
Actinidia24989 Actinidia chinensis
Actinidia33492 Actinidia chinensis
Actinidia34600 Actinidia chinensis
Ah.01g008000 Amaranthus hybridus
Ah.10g031490 Amaranthus hybridus
AL7G27980 Arabidopsis lyrata
AL8G38180 Arabidopsis lyrata
Aqoxy5G03825 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C24P33 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C8D70D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EL3WER Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L77UYS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LW2ET0 Arachis hypogaea
AT4G25170 Arabidopsis thaliana
AT5G61490 Arabidopsis thaliana
ATR0057G106 Amborella trichopoda
Atru.chr1.819 Acer truncatum
Atru.chr5.197 Acer truncatum
Atru.chr5.200 Acer truncatum
Atru.chr5.202 Acer truncatum
AUR62002227 Chenopodium quinoa
AUR62004141 Chenopodium quinoa
AUR62013702 Chenopodium quinoa
BcaB03g12457 Brassica carinata
BcaC06g33154 Brassica carinata
BcaC06g33157 Brassica carinata
BcaC07g38177 Brassica carinata
BcaC09g50801 Brassica carinata
BcaNung04006 Brassica carinata
BolC1t01988H Brassica oleracea
BolC7t45043H Brassica oleracea
BolC8t48599H Brassica oleracea
BraA01t01598Z Brassica rapa
BraA02t09059Z Brassica rapa
BraA03t13836Z Brassica rapa
C01p20580 Brassica napus
C07p45200 Brassica napus
CAN.G48.48 Capsicum annuum
CAN.G899.25 Capsicum annuum
CANSAT21G0262 Cannabis sativa
CANSAT56G2422 Cannabis sativa
CARHR232560 Cardamine hirsuta
CARHR232570 Cardamine hirsuta
CARHR234670 Cardamine hirsuta
CARHR275260 Cardamine hirsuta
Carub.0007s1586 Capsella rubella
Carub.0008s2218 Capsella rubella
Ca_12620_v3 Cicer arietinum L.
Ca_26286_v3 Cicer arietinum L.
Ca_30380_v3 Cicer arietinum L.
Cc02_g04440 Coffea canephora
Cc02_g24720 Coffea canephora
Cc02_g24730 Coffea canephora
Cc03_g10490 Coffea canephora
Cc05_g01400 Coffea canephora
Cc11_g07230 Coffea canephora
Cfa011123 Carpinus fangiana
Cfa012925 Carpinus fangiana
Ciclev10005283m.g Citrus clementina
Ciclev10012939m.g Citrus clementina
Ciclev10021662m.g Citrus clementina
CiPaw.08G001600 Carya illinoinensis
CiPaw.08G001700 Carya illinoinensis
CiPaw.14G023800 Carya illinoinensis
ClCG01G001130 Citrullus lanatus
ClCG06G002940 Citrullus lanatus
COL.COLO4_12453 Corchorus olitorius
COL.COLO4_14095 Corchorus olitorius
Cpa.g.sc13.284 Carica papaya
Cpa.g.sc13.285 Carica papaya
CsaV3_5G001260 Cucumis sativus L.
CsaV3_6G009060 Cucumis sativus L.
CSS0041067 Camellia sinensis var. sinensis
DCAR_018118 Daucus carota
DCAR_020182 Daucus carota
DCAR_031887 Daucus carota
Dinv06576 Davidia involucrata
Dinv44099 Davidia involucrata
Duzib084G0704 Durio zibethinus
Duzib138G1521 Durio zibethinus
Duzib205G1127 Durio zibethinus
ECA233G0134 Erigeron canadensis
ECA238G1863 Erigeron canadensis
ECA240G1543 Erigeron canadensis
ECA240G1814 Erigeron canadensis
EL10Ac1g00810 Beta vulgaris
EL10Ac3g05426 Beta vulgaris
EL10Ac3g05862 Beta vulgaris
Eucgr.A02904 Eucalyptus grandis
Eucgr.D02511 Eucalyptus grandis
Eucgr.K00169 Eucalyptus grandis
FAN01G1320 Fragaria x ananassa
FAN01G2484 Fragaria x ananassa
FAN03G0744 Fragaria x ananassa
FAN03G1252 Fragaria x ananassa
FAN03G2268 Fragaria x ananassa
FAN06G1573 Fragaria x ananassa
FAN06G2231 Fragaria x ananassa
FAN06G4178 Fragaria x ananassa
FAN06G5039 Fragaria x ananassa
FAN10G0777 Fragaria x ananassa
FAN10G2405 Fragaria x ananassa
FAN10G4250 Fragaria x ananassa
FvH4_7g10480 Fragaria vesca
FvH4_7g27250 Fragaria vesca
Glyma.01G074800 Glycine max
Glyma.12G006100 Glycine max
Gohir.A11G039800 Gossypium hirsutum
Gohir.A11G077300 Gossypium hirsutum
Gohir.D11G043100 Gossypium hirsutum
Gohir.D11G081700 Gossypium hirsutum
Gorai.007G046400 Gossypium raimondii
Gorai.007G087400 Gossypium raimondii
GSVIVG01014040001 Vitis vinifera
GSVIVG01018215001 Vitis vinifera
GSVIVG01026926001 Vitis vinifera
HanXRQChr05g0142591 Helianthus annuus
HanXRQChr13g0422771 Helianthus annuus
HanXRQChr14g0461291 Helianthus annuus
Haze_02741 Corylus avellana
Haze_21282 Corylus avellana
Haze_21283 Corylus avellana
Hma1.2p1_0128F.1_g059940 Hydrangea macrophylla
Hma1.2p1_0432F.1_g151920 Hydrangea macrophylla
HPP92_004954 Vanilla planifolia
HPP92_004955 Vanilla planifolia
HPP92_022467 Vanilla planifolia
Hund11841 Selenicereus undatus
Hund17068 Selenicereus undatus
Lalb_Chr01g0000251 Lupinus albus
Lj1A977T69 Lonicera japonica
Lj1g0000551 Lotus japonicus
Lj3g0017052 Lotus japonicus
Lj8C44T1 Lonicera japonica
Lsat_1_v5_gn_2_128541 Lactuca sativa
Lsat_1_v5_gn_3_129821 Lactuca sativa
Lsat_1_v5_gn_8_10400 Lactuca sativa
Manes.05G051400 Manihot esculenta
Manes.06G133000 Manihot esculenta
Manes.14G037400 Manihot esculenta
Mapoly0042s0124 Marchantia polymorpha
MBI04_g09526_MAGBIO Magnolia biondii
MD01G1181400 Malus domestica
MD01G1181500 Malus domestica
MD07G1110800 Malus domestica
MD07G1251500 Malus domestica
MD07G1251600 Malus domestica
Medtr4g036465 Medicago truncatula
Medtr7g045270 Medicago truncatula
MELO3C005821.2 Cucumis melo
MELO3C022236.2 Cucumis melo
Migut.F00490 Erythranthe guttata
Migut.F00491 Erythranthe guttata
Migut.F01190 Erythranthe guttata
Migut.N01759 Erythranthe guttata
MSTRG.133 Avicennia marina
MSTRG.4919 Avicennia marina
Nitab4.5_0001267g0160 Nicotiana tabacum
Nitab4.5_0001358g0090 Nicotiana tabacum
Nitab4.5_0001823g0050 Nicotiana tabacum
Nitab4.5_0003110g0010 Nicotiana tabacum
Nn1g00944 Nelumbo nucifera
Nn6g33893 Nelumbo nucifera
Oeu017784.1 Olea europaea
Os02g0657700 Oryza sativa ssp. japonica
Os04g0550700 Oryza sativa ssp. japonica
Peaxi162Scf00271g00833 Petunia axillaris
Peaxi162Scf00377g00720 Petunia axillaris
PGR042G3253 Punica granatum
PGR105G0004 Punica granatum
PGSC0003DMG400018857 Solanum tuberosum
PGSC0003DMG400025980 Solanum tuberosum
Phvul.011G006900 Phaseolus vulgaris
Potri.001G126300 Populus trichocarpa
Potri.003G107400 Populus trichocarpa
Potri.014G057200 Populus trichocarpa
Pp3c15_19720 Physcomitrium patens
Pp3c2_1090 Physcomitrium patens
Pp3c9_19620 Physcomitrium patens
Prupe.2G134300 Prunus persica
Prupe.2G275300 Prunus persica
Psat3g158080 Pisum sativum
Psat3g167080 Pisum sativum
PSO063G4256 Papaver somniferum
PSO782G1550 Papaver somniferum
QL02p025713 Quercus lobata
QL04p035074 Quercus lobata
QL04p035261 Quercus lobata
QL04p035311 Quercus lobata
RcHm_v2.0_Chr1g0348271 Rosa chinensis
RcHm_v2.0_Chr1g0374081 Rosa chinensis
RcHm_v2.0_Chr5g0046391 Rosa chinensis
RcHm_v2.0_Chr5g0058361 Rosa chinensis
Rhsim01G0136600 Rhododendron simsii
Rhsim03G0165400 Rhododendron simsii
Rhsim09G0190500 Rhododendron simsii
RhsimUnG0213800 Rhododendron simsii
Sabra01G0097400 Salix brachista
Sabra03G0074200 Salix brachista
SalBow2G0493 Salvia bowleyana
SalBow5G2463 Salvia bowleyana
Sc25g0000010 Simmondsia chinensis
Sc26g0000010 Simmondsia chinensis
Sed0017036 Sechium edule
Sed0017911 Sechium edule
SEGI_16254 Sequoiadendron giganteum
SEGI_27148 Sequoiadendron giganteum
SEGI_39337 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01226 Striga asiatica
SGA_v2.0_scaffold43G16524 Striga asiatica
SGA_v2.0_scaffold44G16556 Striga asiatica
SMO367G1113 Selaginella moellendorffii
Solyc01g090680.3 Solanum lycopersicum
Solyc03g093340.4 Solanum lycopersicum
Sopen01g036410 Solanum pennellii
Sopen03g024140 Solanum pennellii
Sp2g24690 Schrenkiella parvula
Sp7g23170 Schrenkiella parvula
Sp7g23180 Schrenkiella parvula
TAR374G1017 Trochodendron aralioides
TAR375G0286 Trochodendron aralioides
THA.LOC104808277 Tarenaya hassleriana
THA.LOC104818512 Tarenaya hassleriana
THA.LOC104825057 Tarenaya hassleriana
Thecc.01G387300 Theobroma cacao
Thecc.03G152900 Theobroma cacao
Thhalv10004733m.g Eutrema salsugineum
Thhalv10025619m.g Eutrema salsugineum
TPR.G3654 Trifolium pratense
TPR.G39117 Trifolium pratense
TPR.G39414 Trifolium pratense
TWI14G0760 Tripterygium wilfordii
TWI23G0718 Tripterygium wilfordii
TWI39G0974 Tripterygium wilfordii
TWI59G1018 Tripterygium wilfordii
vmacro09914 Vaccinium macrocarpon
vmacro21045 Vaccinium macrocarpon
vmacro22809 Vaccinium macrocarpon
VMungo1127G1434 Vigna mungo
VMungo1383G0993 Vigna mungo
Zm00001eb186540 Zea mays
Zm00001eb249490 Zea mays
Zm00001eb429770 Zea mays

User provided reference genes

Program Settings