Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p06020 Brassica napus
A08p34690 Brassica napus
Aa31LG1G5820 Aethionema arabicum
Aa31LG1G5830 Aethionema arabicum
Aa31LG1G5850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3324 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4363 Anthoceros agrestis
Actinidia16873 Actinidia chinensis
Actinidia16874 Actinidia chinensis
Ah.04g158510 Amaranthus hybridus
Ah.04g158520 Amaranthus hybridus
Ah.06g196180 Amaranthus hybridus
AL1G19770 Arabidopsis lyrata
AL1G19790 Arabidopsis lyrata
Aqoxy2G02654 Aquilegia oxysepala
Aqoxy5G02708 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.87Y8BK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.941PVT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BMR8EL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K1W924 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K5JNPB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P173NJ Arachis hypogaea
AT1G09280 Arabidopsis thaliana
AT1G09300 Arabidopsis thaliana
ATR0693G071 Amborella trichopoda
ATR0693G361 Amborella trichopoda
Atru.BG.137.p Acer truncatum
Atru.BG.140.p Acer truncatum
Atru.chr2.243 Acer truncatum
Atru.chr2.247 Acer truncatum
AUR62000421 Chenopodium quinoa
AUR62000422 Chenopodium quinoa
AUR62006767 Chenopodium quinoa
AUR62006768 Chenopodium quinoa
BcaB01g05004 Brassica carinata
BcaB03g13281 Brassica carinata
BcaB03g13283 Brassica carinata
BcaB07g34132 Brassica carinata
BcaC05g24784 Brassica carinata
BcaC07g38490 Brassica carinata
BolC5t29487H Brassica oleracea
BolC8t48898H Brassica oleracea
BraA06t23813Z Brassica rapa
BraA08t35381Z Brassica rapa
C05p07290 Brassica napus
C08p12600 Brassica napus
CAN.G1076.35 Capsicum annuum
CAN.G1076.36 Capsicum annuum
CANSAT54G0992 Cannabis sativa
CARHR009250 Cardamine hirsuta
CARHR009270 Cardamine hirsuta
Carub.0001s0862 Capsella rubella
Carub.0001s0864 Capsella rubella
Ca_10182_v3 Cicer arietinum L.
Ca_10183_v3 Cicer arietinum L.
Ca_28747_v3 Cicer arietinum L.
CBR_g23088 Chara braunii
CBR_g985 Chara braunii
Cc02_g35250 Coffea canephora
Cc02_g35260 Coffea canephora
CDE02G3281 Ceratophyllum demersum
CDE02G4054 Ceratophyllum demersum
Cfa006719 Carpinus fangiana
Cfa022493 Carpinus fangiana
Ciclev10000632m.g Citrus clementina
Ciclev10000978m.g Citrus clementina
CiPaw.07G031200 Carya illinoinensis
CiPaw.08G154500 Carya illinoinensis
ClCG01G011120 Citrullus lanatus
ClCG02G014790 Citrullus lanatus
COL.COLO4_05532 Corchorus olitorius
Cpa.g.sc48.178 Carica papaya
Cpa.g.sc48.179 Carica papaya
Cre01.g046150 Chlamydomonas reinhardtii
Cre03.g201439 Chlamydomonas reinhardtii
Cre12.g538200 Chlamydomonas reinhardtii
Cre17.g719522 Chlamydomonas reinhardtii
CsaV3_1G015660 Cucumis sativus L.
CsaV3_2G007210 Cucumis sativus L.
CSS0018487 Camellia sinensis var. sinensis
CSS0049007 Camellia sinensis var. sinensis
DCAR_005279 Daucus carota
DCAR_025291 Daucus carota
Dinv30908 Davidia involucrata
Duzib128G0271 Durio zibethinus
Duzib177G0986 Durio zibethinus
Duzib177G1111 Durio zibethinus
ECA234G1013 Erigeron canadensis
ECA234G3328 Erigeron canadensis
ECA236G2288 Erigeron canadensis
EL10Ac4g09492 Beta vulgaris
EL10Ac4g09493 Beta vulgaris
Eucgr.B01688 Eucalyptus grandis
Eucgr.H03304 Eucalyptus grandis
Eucgr.L00254 Eucalyptus grandis
FAN02G1899 Fragaria x ananassa
FAN02G4083 Fragaria x ananassa
FAN05G3006 Fragaria x ananassa
FAN05G3891 Fragaria x ananassa
FAN09G2929 Fragaria x ananassa
FAN09G3521 Fragaria x ananassa
FAN14G1324 Fragaria x ananassa
FAN14G5638 Fragaria x ananassa
FvH4_6g07770 Fragaria vesca
FvH4_6g07800 Fragaria vesca
Glyma.10G146000 Glycine max
Glyma.10G146100 Glycine max
Glyma.20G095700 Glycine max
Glyma.20G095800 Glycine max
Gohir.A13G112800 Gossypium hirsutum
Gohir.A13G112900 Gossypium hirsutum
Gohir.D13G115800 Gossypium hirsutum
Gohir.D13G115900 Gossypium hirsutum
Gorai.013G130300 Gossypium raimondii
Gorai.013G130400 Gossypium raimondii
GSVIVG01031261001 Vitis vinifera
GSVIVG01031262001 Vitis vinifera
HanXRQChr04g0110421 Helianthus annuus
HanXRQChr11g0338181 Helianthus annuus
Haze_04041 Corylus avellana
Hma1.2p1_0008F-1.1_g005430 Hydrangea macrophylla
Hma1.2p1_0008F-1.1_g005450 Hydrangea macrophylla
HPP92_003748 Vanilla planifolia
HPP92_003768 Vanilla planifolia
HPP92_003769 Vanilla planifolia
HPP92_010879 Vanilla planifolia
HPP92_010926 Vanilla planifolia
Hund07304 Selenicereus undatus
Hund07305 Selenicereus undatus
Lalb_Chr06g0167431 Lupinus albus
Lalb_Chr21g0310191 Lupinus albus
Lj5A325T77 Lonicera japonica
Lj5g0006657 Lotus japonicus
Lj5g0023373 Lotus japonicus
Lju926A2G19 Lonicera japonica
Lsat_1_v5_gn_5_148721 Lactuca sativa
Lsat_1_v5_gn_7_79981 Lactuca sativa
Manes.08G110000 Manihot esculenta
Manes.09G178200 Manihot esculenta
Mapoly0027s0075 Marchantia polymorpha
Mapoly0166s0012 Marchantia polymorpha
MBI18_g27380_MAGBIO Magnolia biondii
MBI19_g03278_MAGBIO Magnolia biondii
MCO06G121 Micromonas commoda
MCO12G410 Micromonas commoda
MD04G1191800 Malus domestica
MD04G1192000 Malus domestica
Medtr1g084180 Medicago truncatula
Medtr1g084190 Medicago truncatula
MELO3C004172.2 Cucumis melo
MELO3C026102.2 Cucumis melo
Migut.B00939 Erythranthe guttata
Migut.N00946 Erythranthe guttata
MSTRG.20371 Avicennia marina
Nitab4.5_0001338g0020 Nicotiana tabacum
Nitab4.5_0003044g0120 Nicotiana tabacum
Nitab4.5_0003838g0050 Nicotiana tabacum
Nitab4.5_0003838g0060 Nicotiana tabacum
Nn3g21801 Nelumbo nucifera
Nn4g25521 Nelumbo nucifera
Oeu000064.1 Olea europaea
Oeu053732.1 Olea europaea
Os12g0563400 Oryza sativa ssp. japonica
Os12g0563500 Oryza sativa ssp. japonica
Peaxi162Scf00357g00733 Petunia axillaris
Peaxi162Scf00357g00734 Petunia axillaris
PGR031G0028 Punica granatum
PGR083G0299 Punica granatum
PGSC0003DMG400002792 Solanum tuberosum
PGSC0003DMG400002793 Solanum tuberosum
Phvul.007G202600 Phaseolus vulgaris
Phvul.007G202700 Phaseolus vulgaris
Potri.005G011300 Populus trichocarpa
Potri.013G007100 Populus trichocarpa
Pp3c12_9660 Physcomitrium patens
Pp3c5_28120 Physcomitrium patens
PRCOL_00000004 Prasinoderma coloniale
PRCOL_00003794 Prasinoderma coloniale
PRCOL_00004757 Prasinoderma coloniale
PRCOL_00006680 Prasinoderma coloniale
PRCOL_00006763 Prasinoderma coloniale
PRCOL_00006878 Prasinoderma coloniale
Prupe.6G310400 Prunus persica
Prupe.6G310600 Prunus persica
Psat0ss2010g0040 Pisum sativum
Psat1g077200 Pisum sativum
Psat4g049720 Pisum sativum
Psat6g153160 Pisum sativum
Psat6g153200 Pisum sativum
Psat6g200880 Pisum sativum
PSO063G0436 Papaver somniferum
PSO170G6550 Papaver somniferum
PSO210G3019 Papaver somniferum
PSO357G0623 Papaver somniferum
PSO541G1790 Papaver somniferum
PSO761G0375 Papaver somniferum
QL03p016208 Quercus lobata
QL03p016219 Quercus lobata
QL03p016490 Quercus lobata
RcHm_v2.0_Chr3g0457491 Rosa chinensis
RcHm_v2.0_Chr3g0457511 Rosa chinensis
Rhsim07G0241000 Rhododendron simsii
Rhsim11G0097600 Rhododendron simsii
Rhsim11G0097700 Rhododendron simsii
Sabra05G0008400 Salix brachista
Sabra05G0019700 Salix brachista
Sabra13G0006000 Salix brachista
Sabra13G0006100 Salix brachista
SalBow3G0235 Salvia bowleyana
SalBow7G3902 Salvia bowleyana
SalBow8G4037 Salvia bowleyana
Sc06g0005730 Simmondsia chinensis
Sc16g0009160 Simmondsia chinensis
Sed0002163 Sechium edule
Sed0019928 Sechium edule
Sed0027160 Sechium edule
SEGI_04781 Sequoiadendron giganteum
SEGI_10559 Sequoiadendron giganteum
SEGI_11666 Sequoiadendron giganteum
SEGI_16486 Sequoiadendron giganteum
SEGI_39504 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14589 Striga asiatica
SGA_v2.0_scaffold4G01974 Striga asiatica
SMO025G0004 Selaginella moellendorffii
SMO119G0363 Selaginella moellendorffii
SMO147G0335 Selaginella moellendorffii
SMO273G0037 Selaginella moellendorffii
Solyc01g100730.3 Solanum lycopersicum
Solyc01g100740.4 Solanum lycopersicum
Sopen01g044230 Solanum pennellii
Sopen01g044240 Solanum pennellii
Sp1g07890 Schrenkiella parvula
Sp1g07910 Schrenkiella parvula
TAR633G1207 Trochodendron aralioides
TAR636G0049 Trochodendron aralioides
THA.LOC104820580 Tarenaya hassleriana
THA.LOC104823718 Tarenaya hassleriana
Thecc.05G325100 Theobroma cacao
Thecc.05G325200 Theobroma cacao
Thhalv10007152m.g Eutrema salsugineum
Thhalv10007508m.g Eutrema salsugineum
TPR.G19824 Trifolium pratense
TPR.G2627 Trifolium pratense
TPR.G2640 Trifolium pratense
TWI12G0569 Tripterygium wilfordii
TWI56G0626 Tripterygium wilfordii
unitig_42.g32306 Utricularia gibba
unitig_749.g13411 Utricularia gibba
unitig_899.g14747 Utricularia gibba
vmacro01579 Vaccinium macrocarpon
vmacro01580 Vaccinium macrocarpon
VMungo0251G2911 Vigna mungo
VMungo0720G0539 Vigna mungo
VMungo0720G2268 Vigna mungo
Zm00001eb028560 Zea mays
Zm00001eb028570 Zea mays

User provided reference genes

Program Settings