Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Ah.10g027310 Amaranthus hybridus
Ah.10g027320 Amaranthus hybridus
Ah.10g027440 Amaranthus hybridus
Ah.10g029000 Amaranthus hybridus
AL1G45060 Arabidopsis lyrata
AL1G45070 Arabidopsis lyrata
AL2G20520 Arabidopsis lyrata
AL2G20530 Arabidopsis lyrata
AL2G21750 Arabidopsis lyrata
AL2G21760 Arabidopsis lyrata
AL5G19940 Arabidopsis lyrata
Aqoxy5G00925 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.900JYR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EHS3F0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HB4K1E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I6CLRS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ID3W56 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MT7PBJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R0YUWC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YJ6L74 Arachis hypogaea
ATCG00800 Arabidopsis thaliana
ATCG00810 Arabidopsis thaliana
ATR0306G002 Amborella trichopoda
Atru.chr11.440 Acer truncatum
BNapus_Darmor_BZH_scaffold_253p00370 Brassica napus
BolC7t41707H Brassica oleracea
BolC9t56906H Brassica oleracea
BolSC29t60532H Brassica oleracea
BolSC29t60613H Brassica oleracea
BolSC35t60673H Brassica oleracea
BolSC35t60726H Brassica oleracea
BolSC56t61245H Brassica oleracea
BraA06t25386Z Brassica rapa
BraSC103t45443Z Brassica rapa
BraSC103t45487Z Brassica rapa
BraSC138t45551Z Brassica rapa
BraSC143t45639Z Brassica rapa
BraSC58t46504Z Brassica rapa
BraSC59t46568Z Brassica rapa
C03p38130 Brassica napus
C09p40110 Brassica napus
CAN.G1078.3 Capsicum annuum
CAN.G114.8 Capsicum annuum
CAN.G127.12 Capsicum annuum
CAN.G134.2 Capsicum annuum
CAN.G424.95 Capsicum annuum
CARHR141570 Cardamine hirsuta
CARHR282270 Cardamine hirsuta
Ca_04123_v3 Cicer arietinum L.
Cfa007862 Carpinus fangiana
Ciclev10005921m.g Citrus clementina
Ciclev10006396m.g Citrus clementina
CiPaw.03G067300 Carya illinoinensis
CiPaw.10G131300 Carya illinoinensis
CiPaw.11G073000 Carya illinoinensis
ClCG04G000500 Citrullus lanatus
COL.COLO4_00938 Corchorus olitorius
Cpa.g.sc0.194 Carica papaya
Cpa.g.sc301.3 Carica papaya
Cre13.g580850 Chlamydomonas reinhardtii
CsaV3_4G010600 Cucumis sativus L.
CSS0047935 Camellia sinensis var. sinensis
DCAR_032524 Daucus carota
DCAR_032525 Daucus carota
Duzib026G0002 Durio zibethinus
Duzib086G0007 Durio zibethinus
Duzib125G0004 Durio zibethinus
Duzib256G0002 Durio zibethinus
Duzib275G0002 Durio zibethinus
Eucgr.A01255 Eucalyptus grandis
Eucgr.C03015 Eucalyptus grandis
Eucgr.E01404 Eucalyptus grandis
Eucgr.F03422 Eucalyptus grandis
Eucgr.L01887 Eucalyptus grandis
FAN09G4709 Fragaria x ananassa
Glyma.05G001100 Glycine max
Glyma.19G001100 Glycine max
Gohir.1Z049366 Gossypium hirsutum
Gohir.1Z049734 Gossypium hirsutum
Gohir.1Z049834 Gossypium hirsutum
Gohir.A02G112702 Gossypium hirsutum
Gohir.A04G116550 Gossypium hirsutum
Gohir.A08G071000 Gossypium hirsutum
Gohir.A09G101600 Gossypium hirsutum
Gohir.A09G103050 Gossypium hirsutum
Gohir.A12G024432 Gossypium hirsutum
Gohir.A12G024500 Gossypium hirsutum
Gohir.A12G090125 Gossypium hirsutum
Gohir.D01G102164 Gossypium hirsutum
Gohir.D01G102177 Gossypium hirsutum
Gohir.D04G051050 Gossypium hirsutum
Gohir.D06G105066 Gossypium hirsutum
Gohir.D09G093200 Gossypium hirsutum
Gohir.D11G067600 Gossypium hirsutum
Gorai.001G190500 Gossypium raimondii
Gorai.009G325200 Gossypium raimondii
Gorai.010G148900 Gossypium raimondii
Gorai.011G034100 Gossypium raimondii
Gorai.012G056700 Gossypium raimondii
HanXRQChr00c0349g0573961 Helianthus annuus
HanXRQChr00c0394g0574521 Helianthus annuus
HanXRQChr00c0557g0575711 Helianthus annuus
HanXRQChr00c0593g0576401 Helianthus annuus
HanXRQChr00c0593g0576411 Helianthus annuus
HanXRQChr01g0020181 Helianthus annuus
HanXRQChr04g0127451 Helianthus annuus
HanXRQChr05g0152531 Helianthus annuus
HanXRQChr05g0152541 Helianthus annuus
HanXRQChr10g0284421 Helianthus annuus
HanXRQChr10g0318021 Helianthus annuus
HanXRQChr11g0321131 Helianthus annuus
HanXRQChr11g0321141 Helianthus annuus
HanXRQChr11g0327001 Helianthus annuus
HanXRQChr11g0327011 Helianthus annuus
HanXRQChr11g0345141 Helianthus annuus
HanXRQChr12g0369891 Helianthus annuus
HanXRQChr13g0402911 Helianthus annuus
HanXRQChr14g0432301 Helianthus annuus
HanXRQChr16g0500141 Helianthus annuus
HanXRQChr16g0503671 Helianthus annuus
HanXRQChr16g0503681 Helianthus annuus
HanXRQChr16g0526141 Helianthus annuus
HanXRQCPg0580221 Helianthus annuus
Haze_14208 Corylus avellana
Hma1.2p1_0104F.1_g050125 Hydrangea macrophylla
Hma1.2p1_0104F.1_g050140 Hydrangea macrophylla
Hma1.2p1_0192F.1_g083740 Hydrangea macrophylla
Hma1.2p1_0247F.1_g101834 Hydrangea macrophylla
Hma1.2p1_0298F.1_g117736 Hydrangea macrophylla
Hma1.2p1_0298F.1_g117740 Hydrangea macrophylla
Hma1.2p1_0818F.1_g223301 Hydrangea macrophylla
Hma1.2p1_0818F.1_g223306 Hydrangea macrophylla
HPP92_007212 Vanilla planifolia
Hund07448 Selenicereus undatus
Hund08116 Selenicereus undatus
Hund08206 Selenicereus undatus
Hund18006 Selenicereus undatus
Hund28761 Selenicereus undatus
Hund29503 Selenicereus undatus
Hund29530 Selenicereus undatus
Hund29685 Selenicereus undatus
Hund30213 Selenicereus undatus
Hund30542 Selenicereus undatus
Hund31295 Selenicereus undatus
Lalb_Chr03g0038431 Lupinus albus
Lalb_Chr13g0292561 Lupinus albus
Lalb_Chr17g0337521 Lupinus albus
Lalb_Chr23g0274261 Lupinus albus
Lalb_Chr23g0274271 Lupinus albus
Lalb_Chr25g0282891 Lupinus albus
Lj1g0008959 Lotus japonicus
Lj2A1234G110 Lonicera japonica
Lj2C1234G17 Lonicera japonica
Lj2g0018876 Lotus japonicus
Lj2P1237T124 Lonicera japonica
Lj2P1239T79 Lonicera japonica
Lj2P1239T81 Lonicera japonica
LjContig00318g0021445 Lotus japonicus
LjContig00319g0008344 Lotus japonicus
LjContig00319g0015839 Lotus japonicus
Lju5009P0T57 Lonicera japonica
Lju5009P0T59 Lonicera japonica
Lsat_1_v5_gn_3_113300 Lactuca sativa
Lsat_1_v5_gn_3_22620 Lactuca sativa
Lsat_1_v5_gn_5_168080 Lactuca sativa
Lsat_1_v5_gn_5_168100 Lactuca sativa
Lsat_1_v5_gn_5_168120 Lactuca sativa
Lsat_1_v5_gn_5_50461 Lactuca sativa
Lsat_1_v5_gn_5_50481 Lactuca sativa
Mapoly0015s0207 Marchantia polymorpha
Mapoly0093s0065 Marchantia polymorpha
MBI12_g26681_MAGBIO Magnolia biondii
MCO09G075 Micromonas commoda
MD14G1153600 Malus domestica
Medtr0002s0790 Medicago truncatula
Medtr4g051410 Medicago truncatula
Medtr7g100410 Medicago truncatula
Medtr8g038470 Medicago truncatula
MELO3C004853.2 Cucumis melo
Migut.D01324 Erythranthe guttata
Migut.D01326 Erythranthe guttata
Migut.D01327 Erythranthe guttata
Migut.D01369 Erythranthe guttata
Nitab4.5_0000317g0150 Nicotiana tabacum
Nitab4.5_0000382g0100 Nicotiana tabacum
Nitab4.5_0001339g0110 Nicotiana tabacum
Nitab4.5_0004376g0170 Nicotiana tabacum
Nitab4.5_0004430g0040 Nicotiana tabacum
Nitab4.5_0004430g0050 Nicotiana tabacum
Nitab4.5_0004697g0040 Nicotiana tabacum
Nitab4.5_0005412g0040 Nicotiana tabacum
Nitab4.5_0013360g0010 Nicotiana tabacum
Nn070s42374 Nelumbo nucifera
Nn1g08404 Nelumbo nucifera
Nn4g25225 Nelumbo nucifera
Nn4g25226 Nelumbo nucifera
Nn4g25227 Nelumbo nucifera
Nn7g37550 Nelumbo nucifera
Oeu012815.1 Olea europaea
Oeu054717.1 Olea europaea
Oeu060398.1 Olea europaea
Oeu062830.1 Olea europaea
Os07g0273150 Oryza sativa ssp. japonica
Os12g0488300 Oryza sativa ssp. japonica
Peaxi162Scf00299g00118 Petunia axillaris
Peaxi162Scf00362g00547 Petunia axillaris
PGR111G0034 Punica granatum
PGR111G0094 Punica granatum
PGSC0003DMG400003499 Solanum tuberosum
Phvul.004G001400 Phaseolus vulgaris
Potri.002G235600 Populus trichocarpa
Potri.012G047500 Populus trichocarpa
Potri.017G072340 Populus trichocarpa
Psat1g052200 Pisum sativum
Psat3g190920 Pisum sativum
Psat4g046880 Pisum sativum
Psat5g168200 Pisum sativum
Psat6g181640 Pisum sativum
PSO548G0035 Papaver somniferum
PSO548G0101 Papaver somniferum
QL02p048586 Quercus lobata
QL93p1043_0025 Quercus lobata
RcHm_v2.0_Chr1g0329561 Rosa chinensis
RcHm_v2.0_Chr2g0118541 Rosa chinensis
RcHm_v2.0_Chr5g0025841 Rosa chinensis
RcHm_v2.0_Chr6g0286361 Rosa chinensis
RcHm_v2.0_CPg0501841 Rosa chinensis
SalBow1G1132 Salvia bowleyana
Sc09g0006250 Simmondsia chinensis
Sc16g0004460 Simmondsia chinensis
Sc25g0002070 Simmondsia chinensis
Sc25g0002540 Simmondsia chinensis
Sed0004436 Sechium edule
Sed0005264 Sechium edule
Sed0023475 Sechium edule
SEGI_06984 Sequoiadendron giganteum
SEGI_09039 Sequoiadendron giganteum
SEGI_32821 Sequoiadendron giganteum
SGA_v2.0_scaffold907G53717 Striga asiatica
SMO086G0008 Selaginella moellendorffii
SMO086G0021 Selaginella moellendorffii
Solyc00g500034.1 Solanum lycopersicum
Solyc00g500153.1 Solanum lycopersicum
Solyc09g050066.1 Solanum lycopersicum
Solyc11g039530.2 Solanum lycopersicum
Solyc12g035880.1 Solanum lycopersicum
TAR375G1061 Trochodendron aralioides
Thhalv10010706m.g Eutrema salsugineum
TPR.G22135 Trifolium pratense
TWI14G1004 Tripterygium wilfordii
VMungo0464G0334 Vigna mungo
Zm00001eb039190 Zea mays
Zm00001eb097380 Zea mays
Zm00001eb115040 Zea mays
Zm00001eb434870 Zea mays
Zm00001eb435100 Zea mays
Zm00001eb435110 Zea mays
Zm00001eb435640 Zea mays
Zm00001eb437150 Zea mays
Zm00001eb437960 Zea mays
Zm00001eb439940 Zea mays
Zm00001eb439960 Zea mays
Zm00001eb440780 Zea mays
Zm00001eb442200 Zea mays

User provided reference genes

Program Settings