Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p21180 Brassica napus
A06p05260 Brassica napus
A08p35290 Brassica napus
A09p65970 Brassica napus
Aa31LG5G8170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3792 Anthoceros agrestis
Actinidia00823 Actinidia chinensis
Actinidia03685 Actinidia chinensis
Actinidia03686 Actinidia chinensis
Actinidia07202 Actinidia chinensis
Actinidia24171 Actinidia chinensis
Ah.01g016680 Amaranthus hybridus
AL152U10010 Arabidopsis lyrata
AL1G18610 Arabidopsis lyrata
AL1G22310 Arabidopsis lyrata
AL3G29200 Arabidopsis lyrata
AL4G22370 Arabidopsis lyrata
AL5G37390 Arabidopsis lyrata
Aqoxy116s001 Aquilegia oxysepala
Aqoxy1G00990 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1NR55N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7FB8VW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7LY843 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9A188Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ABYE4R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HF0N31 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MZCS2R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QBDD6T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QMJH5G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S9VGYR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X44WLI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZT9T7U Arachis hypogaea
AT1G08200 Arabidopsis thaliana
AT2G27860 Arabidopsis thaliana
ATR0820G068 Amborella trichopoda
Atru.chr3.3405 Acer truncatum
AUR62023966 Chenopodium quinoa
AUR62031766 Chenopodium quinoa
BcaB03g13349 Brassica carinata
BcaB06g28174 Brassica carinata
BcaB08g34235 Brassica carinata
BcaC02g08225 Brassica carinata
BcaC07g41959 Brassica carinata
BcaC07g42516 Brassica carinata
BolC4t27236H Brassica oleracea
BolC5t29389H Brassica oleracea
BolC8t47158H Brassica oleracea
BolC8t52542H Brassica oleracea
BraA04t17687Z Brassica rapa
BraA06t23733Z Brassica rapa
BraA08t35438Z Brassica rapa
C04p57010 Brassica napus
C05p06330 Brassica napus
C08p03540 Brassica napus
C08p50120 Brassica napus
CAN.G386.36 Capsicum annuum
CAN.G919.2 Capsicum annuum
CARHR008030 Cardamine hirsuta
CARHR120550 Cardamine hirsuta
Carub.0001s0756 Capsella rubella
Carub.0004s0862 Capsella rubella
Ca_19362_v3 Cicer arietinum L.
Ca_19395_v3 Cicer arietinum L.
Cc00_g32780 Coffea canephora
Cc01_g09970 Coffea canephora
Cc09_g09280 Coffea canephora
CDE02G0670 Ceratophyllum demersum
CDE11G0078 Ceratophyllum demersum
Cfa010102 Carpinus fangiana
Ciclev10028621m.g Citrus clementina
CiPaw.13G142300 Carya illinoinensis
CiPaw.14G104500 Carya illinoinensis
ClCG02G021790 Citrullus lanatus
COL.COLO4_19268 Corchorus olitorius
Cpa.g.sc47.43 Carica papaya
CsaV3_6G014590 Cucumis sativus L.
CSS0015342 Camellia sinensis var. sinensis
CSS0027669 Camellia sinensis var. sinensis
DCAR_015486 Daucus carota
DCAR_018750 Daucus carota
Dinv00077 Davidia involucrata
Dinv05662 Davidia involucrata
Dinv12143 Davidia involucrata
Dinv12539 Davidia involucrata
Dinv13091 Davidia involucrata
Dinv14512 Davidia involucrata
Dinv14514 Davidia involucrata
Dinv26344 Davidia involucrata
Dinv29032 Davidia involucrata
Dinv29408 Davidia involucrata
Dinv33134 Davidia involucrata
Dinv41126 Davidia involucrata
Duzib150G1436 Durio zibethinus
Duzib168G1771 Durio zibethinus
Duzib170G0327 Durio zibethinus
ECA233G2811 Erigeron canadensis
ECA248G2159 Erigeron canadensis
EL10Ac9g21049 Beta vulgaris
Eucgr.B03902 Eucalyptus grandis
Eucgr.J00413 Eucalyptus grandis
FAN11G1667 Fragaria x ananassa
FAN16G1270 Fragaria x ananassa
FAN21G0440 Fragaria x ananassa
FAN25G3718 Fragaria x ananassa
FvH4_3g30060 Fragaria vesca
Glyma.11G184400 Glycine max
Glyma.11G190200 Glycine max
Glyma.12G084100 Glycine max
Glyma.12G087900 Glycine max
Glyma.12G162945 Glycine max
Glyma.12G180300 Glycine max
Glyma.13G320500 Glycine max
Gohir.A05G084000 Gossypium hirsutum
Gohir.A07G106800 Gossypium hirsutum
Gohir.A09G091500 Gossypium hirsutum
Gohir.A13G223300 Gossypium hirsutum
Gohir.D05G086800 Gossypium hirsutum
Gohir.D07G110700 Gossypium hirsutum
Gohir.D09G091500 Gossypium hirsutum
Gorai.001G118900 Gossypium raimondii
Gorai.006G108100 Gossypium raimondii
Gorai.009G088500 Gossypium raimondii
Gorai.013G258800 Gossypium raimondii
GSVIVG01010687001 Vitis vinifera
GSVIVG01010934001 Vitis vinifera
GSVIVG01014016001 Vitis vinifera
GSVIVG01015684001 Vitis vinifera
GSVIVG01031418001 Vitis vinifera
GSVIVG01036152001 Vitis vinifera
GSVIVG01038790001 Vitis vinifera
HanXRQChr01g0017991 Helianthus annuus
HanXRQChr02g0055111 Helianthus annuus
HanXRQChr09g0251821 Helianthus annuus
HanXRQChr09g0271601 Helianthus annuus
HanXRQChr10g0290181 Helianthus annuus
HanXRQChr11g0346741 Helianthus annuus
HanXRQChr13g0396881 Helianthus annuus
HanXRQChr14g0441691 Helianthus annuus
Haze_23469 Corylus avellana
Hma1.2p1_0051F.1_g029790 Hydrangea macrophylla
HPP92_006432 Vanilla planifolia
HPP92_011556 Vanilla planifolia
Hund00808 Selenicereus undatus
Hund07718 Selenicereus undatus
Lalb_Chr03g0027861 Lupinus albus
Lalb_Chr19g0136781 Lupinus albus
Lalb_Chr22g0350531 Lupinus albus
Lalb_Chr24g0395061 Lupinus albus
Lj1C218G3 Lonicera japonica
Lj2A998T23 Lonicera japonica
Lj3g0007593 Lotus japonicus
Lj3g0010543 Lotus japonicus
Lj3g0027984 Lotus japonicus
Lsat_1_v5_gn_1_61880 Lactuca sativa
Lsat_1_v5_gn_2_23540 Lactuca sativa
Lsat_1_v5_gn_2_96761 Lactuca sativa
Lsat_1_v5_gn_5_34360 Lactuca sativa
Lsat_1_v5_gn_6_42821 Lactuca sativa
Lsat_1_v5_gn_8_14120 Lactuca sativa
Lsat_1_v5_gn_9_81181 Lactuca sativa
Manes.04G010600 Manihot esculenta
Manes.11G155500 Manihot esculenta
Manes.11G160600 Manihot esculenta
Mapoly0001s0477 Marchantia polymorpha
Mapoly0019s0116 Marchantia polymorpha
MBI01_g17934_MAGBIO Magnolia biondii
MBI17_g08129_MAGBIO Magnolia biondii
MBI17_g44942_MAGBIO Magnolia biondii
MD03G1131500 Malus domestica
MD03G1131900 Malus domestica
MD11G1154500 Malus domestica
MD11G1215900 Malus domestica
MD15G1378000 Malus domestica
MD16G1216600 Malus domestica
MD16G1216800 Malus domestica
Medtr1g107455 Medicago truncatula
Medtr1g108530 Medicago truncatula
Medtr2g041340 Medicago truncatula
Medtr4g045693 Medicago truncatula
Medtr4g045737 Medicago truncatula
Medtr4g053420 Medicago truncatula
Medtr4g056100 Medicago truncatula
MELO3C021465.2 Cucumis melo
Migut.A01000 Erythranthe guttata
Migut.D02323 Erythranthe guttata
Migut.E01169 Erythranthe guttata
Migut.N02525 Erythranthe guttata
MSTRG.17740 Avicennia marina
MSTRG.18716 Avicennia marina
MSTRG.21074 Avicennia marina
Nitab4.5_0000227g0120 Nicotiana tabacum
Nitab4.5_0000442g0160 Nicotiana tabacum
Nitab4.5_0002571g0060 Nicotiana tabacum
Nitab4.5_0003470g0060 Nicotiana tabacum
Nitab4.5_0004926g0030 Nicotiana tabacum
Nn2g13955 Nelumbo nucifera
Nn6g34066 Nelumbo nucifera
Nn6g35098 Nelumbo nucifera
Oeu007620.1 Olea europaea
Oeu008376.3 Olea europaea
Oeu010643.2 Olea europaea
Oeu023729.1 Olea europaea
Oeu050169.1 Olea europaea
Os01g0969100 Oryza sativa ssp. japonica
Peaxi162Scf00157g00211 Petunia axillaris
Peaxi162Scf00757g00008 Petunia axillaris
Peaxi162Scf00789g00110 Petunia axillaris
PGR102G2994 Punica granatum
PGR119G2268 Punica granatum
PGSC0003DMG400000433 Solanum tuberosum
PGSC0003DMG400007152 Solanum tuberosum
PGSC0003DMG400028069 Solanum tuberosum
Phvul.005G128500 Phaseolus vulgaris
Phvul.011G088900 Phaseolus vulgaris
Phvul.011G092900 Phaseolus vulgaris
Potri.004G189900 Populus trichocarpa
Potri.009G150600 Populus trichocarpa
Pp3c23_14120 Physcomitrium patens
Pp3c7_18350 Physcomitrium patens
Pp3c9_9260 Physcomitrium patens
Prupe.6G116900 Prunus persica
Psat0s3947g0040 Pisum sativum
Psat0ss7220g0080 Pisum sativum
Psat7g134760 Pisum sativum
Psat7g188400 Pisum sativum
PSO339G1488 Papaver somniferum
PSO801G0340 Papaver somniferum
QL01p014063 Quercus lobata
RcHm_v2.0_Chr5g0055821 Rosa chinensis
Rhsim01G0209500 Rhododendron simsii
Rhsim11G0010100 Rhododendron simsii
Rhsim11G0046500 Rhododendron simsii
Rhsim13G0104000 Rhododendron simsii
RhsimUnG0228600 Rhododendron simsii
Sabra09G0119400 Salix brachista
SalBow3G0547 Salvia bowleyana
SalBow6G5499 Salvia bowleyana
Sc06g0008880 Simmondsia chinensis
Sc12g0003880 Simmondsia chinensis
Sc21g0004600 Simmondsia chinensis
Sed0007734 Sechium edule
Sed0008225 Sechium edule
SEGI_00578 Sequoiadendron giganteum
SEGI_07105 Sequoiadendron giganteum
SGA_v2.0_scaffold27G11594 Striga asiatica
SGA_v2.0_scaffold83G26431 Striga asiatica
SGA_v2.0_scaffold93G28332 Striga asiatica
SMO200G0189 Selaginella moellendorffii
SMO240G0041 Selaginella moellendorffii
Solyc01g009420.4 Solanum lycopersicum
Solyc06g074670.4 Solanum lycopersicum
Solyc11g066720.3 Solanum lycopersicum
Sopen01g004930 Solanum pennellii
Sopen06g031080 Solanum pennellii
Sopen11g026460 Solanum pennellii
Sp1g06850 Schrenkiella parvula
Sp4g10690 Schrenkiella parvula
TAR369G0762 Trochodendron aralioides
TAR626G0239 Trochodendron aralioides
TAR633G0161 Trochodendron aralioides
TAR633G0816 Trochodendron aralioides
TAR633G1999 Trochodendron aralioides
TAR636G1703 Trochodendron aralioides
THA.LOC104799528 Tarenaya hassleriana
THA.LOC104810889 Tarenaya hassleriana
THA.LOC104815733 Tarenaya hassleriana
THA.LOC104826402 Tarenaya hassleriana
Thecc.09G293800 Theobroma cacao
Thhalv10007880m.g Eutrema salsugineum
Thhalv10016776m.g Eutrema salsugineum
Thhalv10025153m.g Eutrema salsugineum
TPR.G17235 Trifolium pratense
TPR.G27162 Trifolium pratense
TWI31G1100 Tripterygium wilfordii
TWI75G1466 Tripterygium wilfordii
TWI79G0195 Tripterygium wilfordii
unitig_22.g5658 Utricularia gibba
unitig_8.g3664 Utricularia gibba
vmacro03229 Vaccinium macrocarpon
vmacro14383 Vaccinium macrocarpon
VMungo0720G0905 Vigna mungo
VMungo1080G1752 Vigna mungo
VMungo1127G0905 Vigna mungo
VMungo1127G1409 Vigna mungo
Zm00001eb137540 Zea mays
Zm00001eb362330 Zea mays

User provided reference genes

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