Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p36510 Brassica napus
A02p16810 Brassica napus
A05p31930 Brassica napus
A07p31000 Brassica napus
A07p37120 Brassica napus
Aa31LG10G5300 Aethionema arabicum
Aa31LG4G10280 Aethionema arabicum
Aa31LG7G7280 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2255 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2073 Anthoceros agrestis
Actinidia12384 Actinidia chinensis
Actinidia27765 Actinidia chinensis
Actinidia36637 Actinidia chinensis
AL2G30130 Arabidopsis lyrata
AL3G31030 Arabidopsis lyrata
Aqoxy3G00036 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1UJ8R8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.23LT4W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5M7JWE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CDP1KS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WAJ05F Arachis hypogaea
AT1G48500 Arabidopsis thaliana
AT1G70700 Arabidopsis thaliana
AT3G17860 Arabidopsis thaliana
ATR0753G139 Amborella trichopoda
Atru.chr11.464 Acer truncatum
Atru.chr11.511 Acer truncatum
Atru.chr9.1665 Acer truncatum
AUR62035399 Chenopodium quinoa
AUR62041886 Chenopodium quinoa
BcaB03g14837 Brassica carinata
BcaB03g15552 Brassica carinata
BcaB04g20810 Brassica carinata
BcaB05g24605 Brassica carinata
BcaB06g25850 Brassica carinata
BcaC03g15222 Brassica carinata
BcaC05g28742 Brassica carinata
BcaC08g45807 Brassica carinata
BcaC08g46518 Brassica carinata
BcaC09g48753 Brassica carinata
BolC1t04587H Brassica oleracea
BolC2t08850H Brassica oleracea
BolC5t33579H Brassica oleracea
BolC6t38720H Brassica oleracea
BolC6t38721H Brassica oleracea
BolC6t39537H Brassica oleracea
BraA01t03714Z Brassica rapa
BraA02t06736Z Brassica rapa
BraA05t22024Z Brassica rapa
BraA07t30736Z Brassica rapa
BraA07t31274Z Brassica rapa
C01p46260 Brassica napus
C02p28060 Brassica napus
C05p48430 Brassica napus
C06p36000 Brassica napus
C06p44750 Brassica napus
CAN.G423.35 Capsicum annuum
CAN.G574.56 Capsicum annuum
CAN.G843.41 Capsicum annuum
CANSAT01G1951 Cannabis sativa
CANSAT80G2239 Cannabis sativa
CARHR038130 Cardamine hirsuta
CARHR063960 Cardamine hirsuta
CARHR093210 Cardamine hirsuta
Carub.0001s3762 Capsella rubella
Carub.0002s1743 Capsella rubella
Carub.0003s1757 Capsella rubella
Ca_23619_v3 Cicer arietinum L.
Ca_25347_v3 Cicer arietinum L.
Cc04_g06060 Coffea canephora
Cc11_g08030 Coffea canephora
CDE05G0170 Ceratophyllum demersum
CDE05G1672 Ceratophyllum demersum
CDE05G1827 Ceratophyllum demersum
CDE05G2039 Ceratophyllum demersum
CDE05G3091 Ceratophyllum demersum
Cfa019631 Carpinus fangiana
Ciclev10015656m.g Citrus clementina
CiPaw.05G190400 Carya illinoinensis
CiPaw.06G049900 Carya illinoinensis
CiPaw.15G144900 Carya illinoinensis
CiPaw.16G096500 Carya illinoinensis
ClCG04G010520 Citrullus lanatus
ClCG07G005870 Citrullus lanatus
COL.COLO4_13078 Corchorus olitorius
COL.COLO4_28884 Corchorus olitorius
Cpa.g.c31503 Carica papaya
Cpa.g.sc2.215 Carica papaya
CsaV3_1G007260 Cucumis sativus L.
CsaV3_5G037080 Cucumis sativus L.
CSS0012514 Camellia sinensis var. sinensis
CSS0022053 Camellia sinensis var. sinensis
DCAR_007322 Daucus carota
DCAR_030257 Daucus carota
Dinv09300 Davidia involucrata
Dinv26254 Davidia involucrata
Dinv28069 Davidia involucrata
Dinv28192 Davidia involucrata
Duzib068G1117 Durio zibethinus
Duzib248G1422 Durio zibethinus
Duzib251G0217 Durio zibethinus
Duzib268G0334 Durio zibethinus
ECA233G2759 Erigeron canadensis
ECA234G2245 Erigeron canadensis
ECA246G1547 Erigeron canadensis
EL10Ac1g02227 Beta vulgaris
EL10Ac8g19504 Beta vulgaris
Eucgr.G02115 Eucalyptus grandis
Eucgr.G02116 Eucalyptus grandis
Eucgr.H00537 Eucalyptus grandis
Eucgr.K02279 Eucalyptus grandis
FAN04G1846 Fragaria x ananassa
FAN07G0308 Fragaria x ananassa
FAN08G2555 Fragaria x ananassa
FAN12G1941 Fragaria x ananassa
FAN13G2856 Fragaria x ananassa
FAN17G3128 Fragaria x ananassa
FAN18G3599 Fragaria x ananassa
FAN22G0391 Fragaria x ananassa
FvH4_4g33850 Fragaria vesca
FvH4_5g17550 Fragaria vesca
Glyma.05G235500 Glycine max
Glyma.08G043000 Glycine max
Glyma.09G123600 Glycine max
Glyma.09G174200 Glycine max
Gohir.A01G148700 Gossypium hirsutum
Gohir.A05G309100 Gossypium hirsutum
Gohir.A12G270200 Gossypium hirsutum
Gohir.D01G141300 Gossypium hirsutum
Gohir.D05G309900 Gossypium hirsutum
Gohir.D12G270600 Gossypium hirsutum
Gorai.002G173700 Gossypium raimondii
Gorai.008G291000 Gossypium raimondii
Gorai.009G330500 Gossypium raimondii
GSVIVG01008453001 Vitis vinifera
GSVIVG01011679001 Vitis vinifera
HanXRQChr08g0212431 Helianthus annuus
HanXRQChr12g0363391 Helianthus annuus
HanXRQChr12g0377791 Helianthus annuus
HanXRQChr17g0567341 Helianthus annuus
Haze_10914 Corylus avellana
Haze_18893 Corylus avellana
Hma1.2p1_0163F.1_g072950 Hydrangea macrophylla
HPP92_023490 Vanilla planifolia
Hund06724 Selenicereus undatus
Lalb_Chr05g0221571 Lupinus albus
Lalb_Chr05g0222291 Lupinus albus
Lalb_Chr14g0370641 Lupinus albus
Lalb_Chr16g0387691 Lupinus albus
Lalb_Chr16g0387701 Lupinus albus
Lalb_Chr22g0353501 Lupinus albus
Lj2g0008146 Lotus japonicus
Lj4g0025032 Lotus japonicus
Lj9A417T37 Lonicera japonica
Lsat_1_v5_gn_8_45621 Lactuca sativa
Manes.06G004000 Manihot esculenta
Manes.14G172400 Manihot esculenta
Manes.15G133000 Manihot esculenta
Manes.17G082100 Manihot esculenta
Mapoly0097s0021 Marchantia polymorpha
MBI09_g01019_MAGBIO Magnolia biondii
MBI12_g03774_MAGBIO Magnolia biondii
MBI18_g46233_MAGBIO Magnolia biondii
MBI19_g20041_MAGBIO Magnolia biondii
MBI19_g46006_MAGBIO Magnolia biondii
MD06G1228900 Malus domestica
MD13G1030000 Malus domestica
MD14G1238100 Malus domestica
MD16G1020800 Malus domestica
Medtr1g031930 Medicago truncatula
Medtr2g029260 Medicago truncatula
Medtr6g069870 Medicago truncatula
MELO3C002143.2 Cucumis melo
MELO3C015030.2 Cucumis melo
Migut.D02043 Erythranthe guttata
Migut.E00464 Erythranthe guttata
Migut.O00230 Erythranthe guttata
MSTRG.13617 Avicennia marina
MSTRG.2141 Avicennia marina
MSTRG.23191 Avicennia marina
MSTRG.4335 Avicennia marina
MSTRG.9704 Avicennia marina
Nitab4.5_0000238g0080 Nicotiana tabacum
Nitab4.5_0001264g0110 Nicotiana tabacum
Nitab4.5_0001546g0010 Nicotiana tabacum
Nitab4.5_0002046g0020 Nicotiana tabacum
Nitab4.5_0009891g0020 Nicotiana tabacum
Nitab4.5_0011970g0020 Nicotiana tabacum
Nn3g18329 Nelumbo nucifera
Nn4g22002 Nelumbo nucifera
Nn4g24302 Nelumbo nucifera
Oeu015090.1 Olea europaea
Oeu016280.1 Olea europaea
Oeu024310.1 Olea europaea
Oeu046627.1 Olea europaea
Oeu062649.1 Olea europaea
Os08g0428400 Oryza sativa ssp. japonica
Os09g0401300 Oryza sativa ssp. japonica
Os12g0609200 Oryza sativa ssp. japonica
Peaxi162Scf00207g00008 Petunia axillaris
Peaxi162Scf00314g00330 Petunia axillaris
Peaxi162Scf00376g00327 Petunia axillaris
PGR083G1816 Punica granatum
PGR102G3242 Punica granatum
PGSC0003DMG400014187 Solanum tuberosum
PGSC0003DMG400028800 Solanum tuberosum
PGSC0003DMG400032119 Solanum tuberosum
Phvul.002G319600 Phaseolus vulgaris
Phvul.003G021000 Phaseolus vulgaris
Phvul.004G149500 Phaseolus vulgaris
Potri.008G133400 Populus trichocarpa
Potri.010G108200 Populus trichocarpa
Potri.012G044900 Populus trichocarpa
Potri.015G035800 Populus trichocarpa
Pp3c16_13450 Physcomitrium patens
Pp3c16_13490 Physcomitrium patens
Pp3c25_6300 Physcomitrium patens
Pp3c25_6330 Physcomitrium patens
Pp3c5_11730 Physcomitrium patens
Pp3c5_11800 Physcomitrium patens
Pp3c6_23650 Physcomitrium patens
Pp3c6_23656 Physcomitrium patens
Prupe.1G331500 Prunus persica
Prupe.5G235300 Prunus persica
Psat1g030440 Pisum sativum
Psat6g045200 Pisum sativum
PSO017G7279 Papaver somniferum
PSO478G3203 Papaver somniferum
QL03p034902 Quercus lobata
QL10p031070 Quercus lobata
RcHm_v2.0_Chr4g0443341 Rosa chinensis
RcHm_v2.0_Chr7g0178101 Rosa chinensis
Rhsim09G0091800 Rhododendron simsii
Sabra08G0102000 Salix brachista
Sabra10G0079200 Salix brachista
Sabra12G0031300 Salix brachista
Sabra15G0029500 Salix brachista
SalBow2G3575 Salvia bowleyana
SalBow5G5730 Salvia bowleyana
Sc10g0009140 Simmondsia chinensis
Sed0011871 Sechium edule
Sed0018101 Sechium edule
Sed0021857 Sechium edule
Sed0027139 Sechium edule
SEGI_28730 Sequoiadendron giganteum
SEGI_30270 Sequoiadendron giganteum
SEGI_39984 Sequoiadendron giganteum
SGA_v2.0_scaffold59G20722 Striga asiatica
SGA_v2.0_scaffold7G04179 Striga asiatica
SGA_v2.0_scaffold90G27782 Striga asiatica
SHI04464 Sapria himalayana
SMO141G0155 Selaginella moellendorffii
Solyc01g005440.4 Solanum lycopersicum
Solyc03g118540.4 Solanum lycopersicum
Solyc06g068930.2 Solanum lycopersicum
Sopen01g001450 Solanum pennellii
Sopen03g037480 Solanum pennellii
Sopen06g026220 Solanum pennellii
Sp3g15990 Schrenkiella parvula
Sp5g25870 Schrenkiella parvula
TAR371G1067 Trochodendron aralioides
TAR622G0175 Trochodendron aralioides
TAR629G1897 Trochodendron aralioides
TAR636G0852 Trochodendron aralioides
THA.LOC104820340 Tarenaya hassleriana
THA.LOC104822165 Tarenaya hassleriana
Thecc.02G290400 Theobroma cacao
Thecc.03G059500 Theobroma cacao
Thhalv10018961m.g Eutrema salsugineum
Thhalv10021029m.g Eutrema salsugineum
TPR.G36865 Trifolium pratense
TPR.G39175 Trifolium pratense
TPR.G8643 Trifolium pratense
TWI15G0998 Tripterygium wilfordii
TWI53G2023 Tripterygium wilfordii
TWI74G0314 Tripterygium wilfordii
TWI81G1041 Tripterygium wilfordii
unitig_27.g25311 Utricularia gibba
unitig_52.g17282 Utricularia gibba
unitig_62.g23742 Utricularia gibba
unitig_750.g28460 Utricularia gibba
vmacro00391 Vaccinium macrocarpon
vmacro10688 Vaccinium macrocarpon
VMungo0251G1609 Vigna mungo
VMungo0464G0224 Vigna mungo
VMungo1215G2182 Vigna mungo
Zm00001eb099240 Zea mays
Zm00001eb179390 Zea mays
Zm00001eb312170 Zea mays

User provided reference genes

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