Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p03400 Brassica napus
A06p21330 Brassica napus
A08p24210 Brassica napus
Aa31LG1G20170 Aethionema arabicum
Aa31LG1G20660 Aethionema arabicum
Aa31LG2G15200 Aethionema arabicum
Aa31LG2G15220 Aethionema arabicum
Aa31LG2G15230 Aethionema arabicum
Aa31LG2G15240 Aethionema arabicum
Aa31LG4G14810 Aethionema arabicum
Aa31LG6G16880 Aethionema arabicum
Aa31LG8G8250 Aethionema arabicum
Aa31sc739G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.878 Anthoceros agrestis
Actinidia07104 Actinidia chinensis
Actinidia07105 Actinidia chinensis
Actinidia14362 Actinidia chinensis
Actinidia21481 Actinidia chinensis
Actinidia24072 Actinidia chinensis
Actinidia24622 Actinidia chinensis
Actinidia24623 Actinidia chinensis
Ah.01g002350 Amaranthus hybridus
Ah.01g008120 Amaranthus hybridus
Ah.01g023330 Amaranthus hybridus
AL5G24240 Arabidopsis lyrata
AL7G10340 Arabidopsis lyrata
AL7G16070 Arabidopsis lyrata
AL8G10100 Arabidopsis lyrata
Aqoxy4G03190 Aquilegia oxysepala
Aqoxy5G01093 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1T6MY4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JMY4T5 Arachis hypogaea
AT3G45620 Arabidopsis thaliana
AT4G35140 Arabidopsis thaliana
AT4G38480 Arabidopsis thaliana
ATR0661G157 Amborella trichopoda
ATR1159G026 Amborella trichopoda
Atru.chr3.3721 Acer truncatum
Atru.chr3.3726 Acer truncatum
Atru.chr5.3455 Acer truncatum
Atru.chr5.3456 Acer truncatum
AUR62010003 Chenopodium quinoa
AUR62012991 Chenopodium quinoa
AUR62040508 Chenopodium quinoa
BcaB01g01081 Brassica carinata
BcaC01g00224 Brassica carinata
BcaC01g00232 Brassica carinata
BcaC01g01964 Brassica carinata
BcaNung00625 Brassica carinata
BolC1t00363H Brassica oleracea
BolC3t19265H Brassica oleracea
BolC3t19963H Brassica oleracea
BraA01t00327Z Brassica rapa
BraA06t25221Z Brassica rapa
BraA08t34375Z Brassica rapa
C01p03710 Brassica napus
C03p70070 Brassica napus
C03p77110 Brassica napus
CANSAT25G3144 Cannabis sativa
CANSAT54G1605 Cannabis sativa
CARHR150000 Cardamine hirsuta
CARHR243450 Cardamine hirsuta
CARHR294200 Cardamine hirsuta
Carub.0005s1147 Capsella rubella
Carub.0007s0036 Capsella rubella
Carub.0007s0516 Capsella rubella
Ca_01443_v3 Cicer arietinum L.
Ca_03292_v3 Cicer arietinum L.
CBR_g26405 Chara braunii
Cc01_g11710 Coffea canephora
Cc09_g10380 Coffea canephora
CDE02G2529 Ceratophyllum demersum
CDE02G4032 Ceratophyllum demersum
CDE04G2778 Ceratophyllum demersum
CDE09G0215 Ceratophyllum demersum
Cfa005296 Carpinus fangiana
Cfa021019 Carpinus fangiana
Cfa024854 Carpinus fangiana
Ciclev10028158m.g Citrus clementina
Ciclev10028345m.g Citrus clementina
CiPaw.05G086000 Carya illinoinensis
CiPaw.06G119800 Carya illinoinensis
ClCG02G003870 Citrullus lanatus
ClCG02G020800 Citrullus lanatus
COL.COLO4_25270 Corchorus olitorius
COL.COLO4_36721 Corchorus olitorius
COL.COLO4_36723 Corchorus olitorius
Cpa.g.sc139.59 Carica papaya
Cpa.g.sc20.122 Carica papaya
Cre07.g328600 Chlamydomonas reinhardtii
CsaV3_6G021810 Cucumis sativus L.
CsaV3_7G001260 Cucumis sativus L.
CSS0007742 Camellia sinensis var. sinensis
CSS0008713 Camellia sinensis var. sinensis
CSS0015306 Camellia sinensis var. sinensis
CSS0028877 Camellia sinensis var. sinensis
CSS0029774 Camellia sinensis var. sinensis
CSS0036513 Camellia sinensis var. sinensis
CSS0046234 Camellia sinensis var. sinensis
DCAR_006033 Daucus carota
DCAR_022422 Daucus carota
Dinv14132 Davidia involucrata
Dinv32807 Davidia involucrata
Dinv41908 Davidia involucrata
Dinv41909 Davidia involucrata
Duzib052G0063 Durio zibethinus
Duzib248G0624 Durio zibethinus
ECA234G2527 Erigeron canadensis
EL10Ac9g21330 Beta vulgaris
EL10Ac9g22406 Beta vulgaris
Eucgr.G01796 Eucalyptus grandis
Eucgr.I01460 Eucalyptus grandis
FAN11G1937 Fragaria x ananassa
FAN15G2184 Fragaria x ananassa
FAN16G1888 Fragaria x ananassa
FAN16G3001 Fragaria x ananassa
FAN17G2485 Fragaria x ananassa
FAN20G0297 Fragaria x ananassa
FAN21G2444 Fragaria x ananassa
FAN21G3956 Fragaria x ananassa
FAN22G0828 Fragaria x ananassa
FAN22G2125 Fragaria x ananassa
FAN24G0442 Fragaria x ananassa
FAN27G1825 Fragaria x ananassa
FvH4_2g15750 Fragaria vesca
FvH4_3g33730 Fragaria vesca
FvH4_3g34190 Fragaria vesca
Glyma.10G284000 Glycine max
Glyma.13G329300 Glycine max
Glyma.15G044600 Glycine max
Glyma.20G105700 Glycine max
Gohir.A01G171100 Gossypium hirsutum
Gohir.A03G206300 Gossypium hirsutum
Gohir.A04G132000 Gossypium hirsutum
Gohir.A08G008000 Gossypium hirsutum
Gohir.A12G036100 Gossypium hirsutum
Gohir.D01G162100 Gossypium hirsutum
Gohir.D02G227700 Gossypium hirsutum
Gohir.D04G168600 Gossypium hirsutum
Gohir.D08G018000 Gossypium hirsutum
Gohir.D12G036500 Gossypium hirsutum
Gorai.002G201000 Gossypium raimondii
Gorai.004G012500 Gossypium raimondii
Gorai.008G037700 Gossypium raimondii
Gorai.012G156900 Gossypium raimondii
GSVIVG01023967001 Vitis vinifera
GSVIVG01025114001 Vitis vinifera
HanXRQChr02g0051401 Helianthus annuus
HanXRQChr10g0300371 Helianthus annuus
HanXRQChr13g0402001 Helianthus annuus
HanXRQChr13g0402011 Helianthus annuus
HanXRQChr17g0544141 Helianthus annuus
HanXRQChr17g0552791 Helianthus annuus
HanXRQChr17g0552821 Helianthus annuus
HanXRQChr17g0552831 Helianthus annuus
HanXRQChr17g0568281 Helianthus annuus
HanXRQChr17g0568301 Helianthus annuus
HanXRQChr17g0568311 Helianthus annuus
Haze_02091 Corylus avellana
Haze_23946 Corylus avellana
Haze_26261 Corylus avellana
Hma1.2p1_0163F.1_g072800 Hydrangea macrophylla
Hma1.2p1_2156F.1_g315440 Hydrangea macrophylla
HPP92_003606 Vanilla planifolia
HPP92_014544 Vanilla planifolia
HPP92_022384 Vanilla planifolia
Hund06452 Selenicereus undatus
Lalb_Chr02g0143541 Lupinus albus
Lalb_Chr24g0394411 Lupinus albus
Lj2A1039T64 Lonicera japonica
Lj3g0021909 Lotus japonicus
Lj5C176T2 Lonicera japonica
Lj5g0008266 Lotus japonicus
Lsat_1_v5_gn_3_108821 Lactuca sativa
Lsat_1_v5_gn_3_47500 Lactuca sativa
Lsat_1_v5_gn_4_70001 Lactuca sativa
Lsat_1_v5_gn_6_24080 Lactuca sativa
Manes.04G070200 Manihot esculenta
Manes.11G098100 Manihot esculenta
Manes.11G140000 Manihot esculenta
Mapoly0034s0106 Marchantia polymorpha
MBI05_g18070_MAGBIO Magnolia biondii
MBI05_g34737_MAGBIO Magnolia biondii
MBI08_g38602_MAGBIO Magnolia biondii
MCO16G108 Micromonas commoda
MD05G1126500 Malus domestica
Medtr1g113000 Medicago truncatula
Medtr2g093200 Medicago truncatula
MELO3C013326.2 Cucumis melo
MELO3C025729.2 Cucumis melo
Migut.B00047 Erythranthe guttata
Migut.D02173 Erythranthe guttata
MSTRG.12614 Avicennia marina
MSTRG.18630 Avicennia marina
MSTRG.19968 Avicennia marina
MSTRG.27629 Avicennia marina
Nitab4.5_0000022g0280 Nicotiana tabacum
Nitab4.5_0000533g0090 Nicotiana tabacum
Nitab4.5_0000888g0090 Nicotiana tabacum
Nitab4.5_0001215g0010 Nicotiana tabacum
Nitab4.5_0004557g0060 Nicotiana tabacum
Nitab4.5_0004867g0110 Nicotiana tabacum
Nitab4.5_0007369g0030 Nicotiana tabacum
Nitab4.5_0007759g0020 Nicotiana tabacum
Nn2g10651 Nelumbo nucifera
Nn2g12989 Nelumbo nucifera
Nn6g31894 Nelumbo nucifera
Nn6g31895 Nelumbo nucifera
Oeu024925.1 Olea europaea
Oeu028957.1 Olea europaea
Oeu029653.1 Olea europaea
Oeu062272.2 Olea europaea
Os03g0286800 Oryza sativa ssp. japonica
Os06g0724500 Oryza sativa ssp. japonica
Os10g0544500 Oryza sativa ssp. japonica
Peaxi162Scf00362g00434 Petunia axillaris
Peaxi162Scf00389g00411 Petunia axillaris
PGR042G3186 Punica granatum
PGR102G2556 Punica granatum
PGR142G4377 Punica granatum
PGSC0003DMG400012099 Solanum tuberosum
PGSC0003DMG400018642 Solanum tuberosum
PGSC0003DMG400025376 Solanum tuberosum
Phvul.005G137900 Phaseolus vulgaris
Phvul.007G017300 Phaseolus vulgaris
Potri.004G178700 Populus trichocarpa
Potri.009G139000 Populus trichocarpa
Pp3c14_16170 Physcomitrium patens
Pp3c17_20160 Physcomitrium patens
Pp3c2_4390 Physcomitrium patens
PRCOL_00006515 Prasinoderma coloniale
Prupe.8G169900 Prunus persica
Psat5g276880 Pisum sativum
Psat6g232800 Pisum sativum
PSO063G4571 Papaver somniferum
PSO170G4971 Papaver somniferum
PSO210G0462 Papaver somniferum
QL01p036421 Quercus lobata
QL11p052516 Quercus lobata
RcHm_v2.0_Chr5g0008271 Rosa chinensis
RcHm_v2.0_Chr5g0008341 Rosa chinensis
RcHm_v2.0_Chr5g0061271 Rosa chinensis
RcHm_v2.0_Chr6g0279061 Rosa chinensis
RcHm_v2.0_Chr6g0279071 Rosa chinensis
Rhsim01G0221400 Rhododendron simsii
Rhsim05G0052400 Rhododendron simsii
Rhsim11G0194100 Rhododendron simsii
Sabra04G0120300 Salix brachista
Sabra09G0107700 Salix brachista
SalBow1G8665 Salvia bowleyana
SalBow3G0887 Salvia bowleyana
SalBow8G2819 Salvia bowleyana
SalBow8G3548 Salvia bowleyana
Sc18g0006220 Simmondsia chinensis
Sed0000019 Sechium edule
Sed0019617 Sechium edule
SEGI_10308 Sequoiadendron giganteum
SEGI_20167 Sequoiadendron giganteum
SEGI_41385 Sequoiadendron giganteum
SGA_v2.0_scaffold2G00914 Striga asiatica
SGA_v2.0_scaffold316G48417 Striga asiatica
SGA_v2.0_scaffold32G13313 Striga asiatica
SMO115G0230 Selaginella moellendorffii
SMO356G0506 Selaginella moellendorffii
Solyc11g072540.3 Solanum lycopersicum
Sopen01g053900 Solanum pennellii
Sopen11g030190 Solanum pennellii
Sp5g15870 Schrenkiella parvula
Sp7g32910 Schrenkiella parvula
Sp7g37300 Schrenkiella parvula
TAR376G0644 Trochodendron aralioides
TAR376G0839 Trochodendron aralioides
TAR623G1208 Trochodendron aralioides
TAR628G1667 Trochodendron aralioides
TAR636G1624 Trochodendron aralioides
TAR636G2289 Trochodendron aralioides
THA.LOC104807382 Tarenaya hassleriana
THA.LOC104824749 Tarenaya hassleriana
Thecc.02G053900 Theobroma cacao
Thecc.09G262300 Theobroma cacao
Thecc.09G262400 Theobroma cacao
Thhalv10002508m.g Eutrema salsugineum
Thhalv10025111m.g Eutrema salsugineum
Thhalv10025258m.g Eutrema salsugineum
Thhalv10027593m.g Eutrema salsugineum
TPR.G11602 Trifolium pratense
TPR.G2449 Trifolium pratense
TWI75G0200 Tripterygium wilfordii
TWI79G1766 Tripterygium wilfordii
unitig_52.g17181 Utricularia gibba
unitig_62.g23661 Utricularia gibba
unitig_62.g23662 Utricularia gibba
vmacro02295 Vaccinium macrocarpon
vmacro14481 Vaccinium macrocarpon
vmacro17330 Vaccinium macrocarpon
VMungo0720G2845 Vigna mungo
VMungo1080G0838 Vigna mungo
Zm00001eb013140 Zea mays
Zm00001eb272160 Zea mays
Zm00001eb353130 Zea mays
Zm00001eb393900 Zea mays

User provided reference genes

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