Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p29990 Brassica napus
A02p30020 Brassica napus
A03p19240 Brassica napus
A05p10950 Brassica napus
A06p48370 Brassica napus
A07p35000 Brassica napus
Aa31LG10G6640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.591 Anthoceros agrestis
Actinidia13665 Actinidia chinensis
Actinidia31390 Actinidia chinensis
Ah.02g127020 Amaranthus hybridus
Ah.09g234060 Amaranthus hybridus
Ah.14g087480 Amaranthus hybridus
AL3G12840 Arabidopsis lyrata
AL4G30680 Arabidopsis lyrata
AL7G11840 Arabidopsis lyrata
AL8G11820 Arabidopsis lyrata
AL8G11850 Arabidopsis lyrata
AL8G11880 Arabidopsis lyrata
Aqoxy1G01644 Aquilegia oxysepala
Aqoxy3G02621 Aquilegia oxysepala
Aqoxy3G03950 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H55E6Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KA4332 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KL67S4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NSD4SF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P8184S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S2CF7K Arachis hypogaea
AT2G34690 Arabidopsis thaliana
AT4G39670 Arabidopsis thaliana
ATR0104G016 Amborella trichopoda
ATR0165G009 Amborella trichopoda
ATR0686G237 Amborella trichopoda
Atru.chr10.893 Acer truncatum
Atru.chr11.1283 Acer truncatum
AUR62002884 Chenopodium quinoa
AUR62012827 Chenopodium quinoa
AUR62035247 Chenopodium quinoa
BcaB03g12269 Brassica carinata
BcaB03g15838 Brassica carinata
BcaB03g15839 Brassica carinata
BcaC01g00308 Brassica carinata
BcaC01g05782 Brassica carinata
BcaC03g16855 Brassica carinata
BcaC03g16860 Brassica carinata
BcaC08g46307 Brassica carinata
BcaNung02312 Brassica carinata
BolC2t10789H Brassica oleracea
BolC2t10790H Brassica oleracea
BolC2t10794H Brassica oleracea
BolC3t14627H Brassica oleracea
BolC4t22997H Brassica oleracea
BolC6t39298H Brassica oleracea
BolC7t46713H Brassica oleracea
BraA02t08020Z Brassica rapa
BraA02t08022Z Brassica rapa
BraA03t11179Z Brassica rapa
BraA06t27704Z Brassica rapa
BraA08t34302Z Brassica rapa
C02p47480 Brassica napus
C02p47490 Brassica napus
C02p47540 Brassica napus
C03p22440 Brassica napus
C04p14050 Brassica napus
C04p14070 Brassica napus
C06p41270 Brassica napus
C07p63020 Brassica napus
CAN.G1205.2 Capsicum annuum
CAN.G660.44 Capsicum annuum
CANSAT01G1002 Cannabis sativa
CANSAT35G1726 Cannabis sativa
CARHR059410 Cardamine hirsuta
CARHR128820 Cardamine hirsuta
CARHR247060 Cardamine hirsuta
Carub.0004s1638 Capsella rubella
Carub.0007s0154 Capsella rubella
Carub.0008s0651 Capsella rubella
Ca_00800_v3 Cicer arietinum L.
Ca_00855_v3 Cicer arietinum L.
Ca_11181_v3 Cicer arietinum L.
Cc09_g08080 Coffea canephora
Cc11_g10260 Coffea canephora
CDE04G1545 Ceratophyllum demersum
Cfa000833 Carpinus fangiana
Ciclev10016636m.g Citrus clementina
Ciclev10033991m.g Citrus clementina
CiPaw.09G116000 Carya illinoinensis
CiPaw.15G083800 Carya illinoinensis
ClCG05G022810 Citrullus lanatus
ClCG09G008840 Citrullus lanatus
COL.COLO4_07908 Corchorus olitorius
COL.COLO4_17683 Corchorus olitorius
Cpa.g.sc1.183 Carica papaya
Cpa.g.sc17.96 Carica papaya
Cre03.g144204 Chlamydomonas reinhardtii
CsaV3_5G034220 Cucumis sativus L.
CsaV3_7G026030 Cucumis sativus L.
CSS0018857 Camellia sinensis var. sinensis
CSS0038948 Camellia sinensis var. sinensis
DCAR_007239 Daucus carota
DCAR_027862 Daucus carota
Dinv04480 Davidia involucrata
Dinv15917 Davidia involucrata
Dinv15923 Davidia involucrata
Dinv25456 Davidia involucrata
Dinv25457 Davidia involucrata
Duzib132G1017 Durio zibethinus
Duzib248G1538 Durio zibethinus
Duzib268G0956 Durio zibethinus
ECA234G3381 Erigeron canadensis
ECA236G4401 Erigeron canadensis
EL10Ac6g14434 Beta vulgaris
EL10Ac8g20232 Beta vulgaris
Eucgr.E02492 Eucalyptus grandis
Eucgr.G00858 Eucalyptus grandis
FAN07G0790 Fragaria x ananassa
FAN11G2577 Fragaria x ananassa
FAN12G0167 Fragaria x ananassa
FAN12G3811 Fragaria x ananassa
FAN21G2409 Fragaria x ananassa
FAN22G2426 Fragaria x ananassa
FAN25G2973 Fragaria x ananassa
FvH4_3g09960 Fragaria vesca
FvH4_4g27590 Fragaria vesca
Glyma.09G022100 Glycine max
Glyma.10G275200 Glycine max
Glyma.15G128400 Glycine max
Glyma.20G114600 Glycine max
Gohir.A03G100600 Gossypium hirsutum
Gohir.A12G045533 Gossypium hirsutum
Gohir.A12G167700 Gossypium hirsutum
Gohir.D02G115500 Gossypium hirsutum
Gohir.D08G133133 Gossypium hirsutum
Gohir.D12G044600 Gossypium hirsutum
Gohir.D12G171400 Gossypium hirsutum
Gorai.004G136100 Gossypium raimondii
Gorai.005G138500 Gossypium raimondii
Gorai.008G046900 Gossypium raimondii
Gorai.008G183900 Gossypium raimondii
GSVIVG01021615001 Vitis vinifera
GSVIVG01029289001 Vitis vinifera
GSVIVG01029291001 Vitis vinifera
GSVIVG01029292001 Vitis vinifera
GSVIVG01029293001 Vitis vinifera
GSVIVG01029294001 Vitis vinifera
GSVIVG01029296001 Vitis vinifera
HanXRQChr02g0058701 Helianthus annuus
HanXRQChr04g0099391 Helianthus annuus
HanXRQChr07g0194111 Helianthus annuus
HanXRQChr08g0214181 Helianthus annuus
HanXRQChr12g0364661 Helianthus annuus
HanXRQChr13g0400261 Helianthus annuus
HanXRQChr16g0529361 Helianthus annuus
HanXRQChr17g0567631 Helianthus annuus
Haze_05772 Corylus avellana
Haze_17467 Corylus avellana
Hma1.2p1_0061F.1_g034120 Hydrangea macrophylla
Hma1.2p1_0333F.1_g128360 Hydrangea macrophylla
Hma1.2p1_0406F.1_g146150 Hydrangea macrophylla
HPP92_017712 Vanilla planifolia
Hund21141 Selenicereus undatus
Hund25079 Selenicereus undatus
Lalb_Chr02g0146061 Lupinus albus
Lalb_Chr15g0088711 Lupinus albus
Lalb_Chr20g0119981 Lupinus albus
Lalb_Chr21g0308991 Lupinus albus
Lj2C328G2 Lonicera japonica
Lj3A1017G48 Lonicera japonica
Lj5g0009598 Lotus japonicus
Lj6C760T10 Lonicera japonica
Lj6g0010433 Lotus japonicus
Lsat_1_v5_gn_2_45841 Lactuca sativa
Lsat_1_v5_gn_3_59640 Lactuca sativa
Lsat_1_v5_gn_5_94840 Lactuca sativa
Lsat_1_v5_gn_6_65640 Lactuca sativa
Lsat_1_v5_gn_8_39160 Lactuca sativa
Lsat_1_v5_gn_9_80980 Lactuca sativa
Manes.06G069800 Manihot esculenta
Manes.14G101000 Manihot esculenta
Manes.14G122400 Manihot esculenta
Mapoly0002s0185 Marchantia polymorpha
MBI02_g11455_MAGBIO Magnolia biondii
MBI13_g17733_MAGBIO Magnolia biondii
MD05G1274400 Malus domestica
MD10G1254100 Malus domestica
MD11G1019900 Malus domestica
MD11G1020300 Malus domestica
MD11G1020400 Malus domestica
MD11G1020600 Malus domestica
MD11G1073600 Malus domestica
MD13G1043300 Malus domestica
MD16G1044100 Malus domestica
Medtr1g111100 Medicago truncatula
Medtr2g029520 Medicago truncatula
Medtr2g030530 Medicago truncatula
Medtr5g091210 Medicago truncatula
MELO3C012236.2 Cucumis melo
MELO3C021055.2 Cucumis melo
MELO3C031298.2 Cucumis melo
Migut.G00584 Erythranthe guttata
MSTRG.13519 Avicennia marina
MSTRG.4189 Avicennia marina
Nitab4.5_0000145g0170 Nicotiana tabacum
Nitab4.5_0001181g0030 Nicotiana tabacum
Nitab4.5_0003407g0060 Nicotiana tabacum
Nitab4.5_0012442g0010 Nicotiana tabacum
Nn3g17810 Nelumbo nucifera
Nn3g20248 Nelumbo nucifera
Nn4g23811 Nelumbo nucifera
Oeu007548.1 Olea europaea
Oeu009781.1 Olea europaea
Oeu036196.1 Olea europaea
Os03g0710700 Oryza sativa ssp. japonica
Os03g0784900 Oryza sativa ssp. japonica
Os08g0556300 Oryza sativa ssp. japonica
Peaxi162Scf00004g02221 Petunia axillaris
Peaxi162Scf00158g00117 Petunia axillaris
Peaxi162Scf00195g00120 Petunia axillaris
PGR031G1251 Punica granatum
PGR083G2655 Punica granatum
PGR102G0703 Punica granatum
PGSC0003DMG400010957 Solanum tuberosum
PGSC0003DMG400021103 Solanum tuberosum
Phvul.001G232500 Phaseolus vulgaris
Phvul.006G130300 Phaseolus vulgaris
Phvul.007G026500 Phaseolus vulgaris
Potri.006G051800 Populus trichocarpa
Potri.008G119600 Populus trichocarpa
Potri.016G055300 Populus trichocarpa
Pp3c15_300 Physcomitrium patens
PRCOL_00002682 Prasinoderma coloniale
Prupe.1G309200 Prunus persica
Prupe.4G089300 Prunus persica
Psat1g166560 Pisum sativum
Psat1g168600 Pisum sativum
Psat6g228920 Pisum sativum
PSO063G4248 Papaver somniferum
PSO541G4444 Papaver somniferum
PSO541G5461 Papaver somniferum
PSO541G6509 Papaver somniferum
PSO675G0854 Papaver somniferum
PSO675G1915 Papaver somniferum
PSO675G7293 Papaver somniferum
PSO675G8828 Papaver somniferum
PSO675G9107 Papaver somniferum
PSO717G0086 Papaver somniferum
PSO717G0132 Papaver somniferum
PSO782G5480 Papaver somniferum
QL01p043782 Quercus lobata
QL03p005115 Quercus lobata
QL03p006090 Quercus lobata
QL03p006098 Quercus lobata
QL05p053263 Quercus lobata
QL11p008863 Quercus lobata
RcHm_v2.0_Chr4g0435431 Rosa chinensis
RcHm_v2.0_Chr5g0015711 Rosa chinensis
Rhsim02G0160300 Rhododendron simsii
Rhsim09G0132700 Rhododendron simsii
Rhsim09G0132800 Rhododendron simsii
Rhsim09G0133000 Rhododendron simsii
Rhsim09G0133100 Rhododendron simsii
Rhsim12G0082800 Rhododendron simsii
Sabra06G0036400 Salix brachista
Sabra08G0090700 Salix brachista
Sabra16G0058000 Salix brachista
SalBow2G2831 Salvia bowleyana
SalBow8G0961 Salvia bowleyana
SalBow8G1789 Salvia bowleyana
Sc04g0006540 Simmondsia chinensis
Sc17g0004660 Simmondsia chinensis
Sed0003937 Sechium edule
Sed0010614 Sechium edule
Sed0022995 Sechium edule
SEGI_07916 Sequoiadendron giganteum
SEGI_12279 Sequoiadendron giganteum
SEGI_32631 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02001 Striga asiatica
SMO145G0165 Selaginella moellendorffii
Solyc02g070250.4 Solanum lycopersicum
Solyc12g033130.2 Solanum lycopersicum
Sopen02g019340 Solanum pennellii
Sopen12g013740 Solanum pennellii
Sp2g11340 Schrenkiella parvula
Sp4g16970 Schrenkiella parvula
Sp5g23670 Schrenkiella parvula
Sp7g36220 Schrenkiella parvula
TAR374G0092 Trochodendron aralioides
TAR622G0684 Trochodendron aralioides
TAR624G0261 Trochodendron aralioides
TAR626G0561 Trochodendron aralioides
THA.LOC104812684 Tarenaya hassleriana
THA.LOC104814320 Tarenaya hassleriana
THA.LOC104821943 Tarenaya hassleriana
Thecc.02G012400 Theobroma cacao
Thecc.02G356900 Theobroma cacao
Thhalv10001224m.g Eutrema salsugineum
Thhalv10017082m.g Eutrema salsugineum
Thhalv10019106m.g Eutrema salsugineum
Thhalv10026153m.g Eutrema salsugineum
TPR.G26313 Trifolium pratense
TPR.G26345 Trifolium pratense
TPR.G36195 Trifolium pratense
TWI09G1384 Tripterygium wilfordii
TWI31G0733 Tripterygium wilfordii
TWI73G0873 Tripterygium wilfordii
TWI79G0032 Tripterygium wilfordii
unitig_22.g5567 Utricularia gibba
unitig_32.g11691 Utricularia gibba
unitig_32.g11692 Utricularia gibba
vmacro01375 Vaccinium macrocarpon
vmacro10971 Vaccinium macrocarpon
VMungo0540G1859 Vigna mungo
VMungo0720G0818 Vigna mungo
Zm00001eb054800 Zea mays
Zm00001eb059860 Zea mays
Zm00001eb216430 Zea mays

User provided reference genes

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