Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02370 Brassica napus
A02p23450 Brassica napus
A02p23460 Brassica napus
A02p23480 Brassica napus
A07p45110 Brassica napus
Aa31LG11G14990 Aethionema arabicum
Aa31LG4G830 Aethionema arabicum
Aa31LG4G850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2916 Anthoceros agrestis
Actinidia02747 Actinidia chinensis
Actinidia03217 Actinidia chinensis
Actinidia03218 Actinidia chinensis
Actinidia03219 Actinidia chinensis
Actinidia04676 Actinidia chinensis
Actinidia08952 Actinidia chinensis
Actinidia25437 Actinidia chinensis
Actinidia25438 Actinidia chinensis
Actinidia27518 Actinidia chinensis
Actinidia30712 Actinidia chinensis
Actinidia30716 Actinidia chinensis
Ah.01g004830 Amaranthus hybridus
Ah.01g006660 Amaranthus hybridus
AL1G50860 Arabidopsis lyrata
AL2G40860 Arabidopsis lyrata
AL2G40900 Arabidopsis lyrata
AL2G40910 Arabidopsis lyrata
AL6G24870 Arabidopsis lyrata
Aqoxy1G01546 Aquilegia oxysepala
Aqoxy290s001 Aquilegia oxysepala
Aqoxy4G00566 Aquilegia oxysepala
Aqoxy4G02093 Aquilegia oxysepala
Aqoxy6G02753 Aquilegia oxysepala
Aqoxy7G03544 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8N7B8R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9XJ6IP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G3W1SC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GNX4LQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MFGQ7M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S9NP0T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WS718B Arachis hypogaea
AT1G31180 Arabidopsis thaliana
AT1G80555 Arabidopsis thaliana
AT1G80560 Arabidopsis thaliana
AT1G80570 Arabidopsis thaliana
AT5G14200 Arabidopsis thaliana
ATR0165G046 Amborella trichopoda
ATR0767G064 Amborella trichopoda
Atru.chr10.413 Acer truncatum
Atru.chr12.1590 Acer truncatum
Atru.chr13.159 Acer truncatum
Atru.chr13.1967 Acer truncatum
AUR62011454 Chenopodium quinoa
AUR62011462 Chenopodium quinoa
AUR62016593 Chenopodium quinoa
AUR62016603 Chenopodium quinoa
BcaB04g21073 Brassica carinata
BcaB05g22992 Brassica carinata
BcaB05g25256 Brassica carinata
BcaB05g25258 Brassica carinata
BcaB05g25259 Brassica carinata
BcaB06g27373 Brassica carinata
BcaB08g36788 Brassica carinata
BcaC03g15951 Brassica carinata
BcaC03g15953 Brassica carinata
BcaC03g15954 Brassica carinata
BcaC03g15957 Brassica carinata
BcaNung04497 Brassica carinata
BcaNung04500 Brassica carinata
BcaNung04502 Brassica carinata
BolC2t06605H Brassica oleracea
BolC2t09726H Brassica oleracea
BolC2t09727H Brassica oleracea
BolC2t09728H Brassica oleracea
BolC2t09729H Brassica oleracea
BolC3t19674H Brassica oleracea
BolC6t40408H Brassica oleracea
BolC9t54083H Brassica oleracea
BraA02t05207Z Brassica rapa
BraA02t07337Z Brassica rapa
BraA02t07338Z Brassica rapa
BraA02t07340Z Brassica rapa
BraA07t32014Z Brassica rapa
C02p06590 Brassica napus
C02p37150 Brassica napus
C02p37160 Brassica napus
C02p37180 Brassica napus
C03p73820 Brassica napus
C06p53940 Brassica napus
C09p11950 Brassica napus
CAN.G610.41 Capsicum annuum
CAN.G697.13 Capsicum annuum
CANSAT56G0483 Cannabis sativa
CANSAT78G2160 Cannabis sativa
CARHR073940 Cardamine hirsuta
CARHR074080 Cardamine hirsuta
CARHR125330 Cardamine hirsuta
CARHR199140 Cardamine hirsuta
CARHR205690 Cardamine hirsuta
Carub.0002s2697 Capsella rubella
Carub.0002s2699 Capsella rubella
Carub.0002s2700 Capsella rubella
Carub.0006s1240 Capsella rubella
Ca_01029_v3 Cicer arietinum L.
Ca_01033_v3 Cicer arietinum L.
Ca_01035_v3 Cicer arietinum L.
Ca_01036_v3 Cicer arietinum L.
Ca_30253_v3 Cicer arietinum L.
CBR_g24441 Chara braunii
CBR_g55786 Chara braunii
CBR_g7976 Chara braunii
Cc00_g32470 Coffea canephora
Cc04_g04800 Coffea canephora
Cc11_g03270 Coffea canephora
CDE02G2027 Ceratophyllum demersum
CDE05G0929 Ceratophyllum demersum
CDE05G1651 Ceratophyllum demersum
Cfa001914 Carpinus fangiana
Cfa001917 Carpinus fangiana
Cfa027330 Carpinus fangiana
Ciclev10025548m.g Citrus clementina
Ciclev10025744m.g Citrus clementina
CiPaw.01G251500 Carya illinoinensis
CiPaw.01G251700 Carya illinoinensis
ClCG07G012340 Citrullus lanatus
ClCG09G003170 Citrullus lanatus
COL.COLO4_10077 Corchorus olitorius
COL.COLO4_33613 Corchorus olitorius
COL.COLO4_36708 Corchorus olitorius
COL.COLO4_36709 Corchorus olitorius
Cpa.g.sc10.126 Carica papaya
Cpa.g.sc52.151 Carica papaya
Cre07.g325400 Chlamydomonas reinhardtii
CsaV3_4G001800 Cucumis sativus L.
CsaV3_7G032050 Cucumis sativus L.
CSS0006698 Camellia sinensis var. sinensis
CSS0028818 Camellia sinensis var. sinensis
CSS0034242 Camellia sinensis var. sinensis
CSS0044698 Camellia sinensis var. sinensis
DCAR_021360 Daucus carota
Dinv23318 Davidia involucrata
Dinv38158 Davidia involucrata
Duzib147G1049 Durio zibethinus
Duzib235G0702 Durio zibethinus
ECA232G4796 Erigeron canadensis
ECA240G4532 Erigeron canadensis
ECA246G3767 Erigeron canadensis
EL10Ac9g21856 Beta vulgaris
Eucgr.F03933 Eucalyptus grandis
Eucgr.J03091 Eucalyptus grandis
FAN02G3408 Fragaria x ananassa
FAN05G0323 Fragaria x ananassa
FAN05G0349 Fragaria x ananassa
FAN09G0213 Fragaria x ananassa
FAN15G3483 Fragaria x ananassa
FAN19G2383 Fragaria x ananassa
FAN20G0035 Fragaria x ananassa
FAN23G0437 Fragaria x ananassa
FAN24G0510 Fragaria x ananassa
FvH4_1g23541 Fragaria vesca
FvH4_1g23550 Fragaria vesca
FvH4_2g04971 Fragaria vesca
FvH4_6g29021 Fragaria vesca
Glyma.11G079000 Glycine max
Glyma.13G367900 Glycine max
Glyma.13G368900 Glycine max
Glyma.15G004900 Glycine max
Glyma.15G005400 Glycine max
Gohir.A08G221654 Gossypium hirsutum
Gohir.A10G072700 Gossypium hirsutum
Gohir.D08G240900 Gossypium hirsutum
Gohir.D10G078300 Gossypium hirsutum
Gorai.004G256300 Gossypium raimondii
Gorai.011G085100 Gossypium raimondii
GSVIVG01017521001 Vitis vinifera
GSVIVG01023010001 Vitis vinifera
HanXRQChr05g0140811 Helianthus annuus
HanXRQChr05g0163631 Helianthus annuus
HanXRQChr06g0181061 Helianthus annuus
HanXRQChr16g0510241 Helianthus annuus
Haze_16625 Corylus avellana
Haze_16628 Corylus avellana
Haze_16631 Corylus avellana
Hma1.2p1_0109F.1_g052250 Hydrangea macrophylla
Hma1.2p1_0111F.1_g053110 Hydrangea macrophylla
Hma1.2p1_0135F.1_g061690 Hydrangea macrophylla
HPP92_009455 Vanilla planifolia
Hund00491 Selenicereus undatus
Hund00508 Selenicereus undatus
Hund06538 Selenicereus undatus
Lalb_Chr14g0373941 Lupinus albus
Lalb_Chr14g0373981 Lupinus albus
Lalb_Chr22g0350731 Lupinus albus
Lalb_Chr22g0350741 Lupinus albus
Lalb_Chr24g0395371 Lupinus albus
Lj1A617G82 Lonicera japonica
Lj3g0004208 Lotus japonicus
Lj3g0005746 Lotus japonicus
Lj5C77T4 Lonicera japonica
Lsat_1_v5_gn_5_7881 Lactuca sativa
Lsat_1_v5_gn_8_105360 Lactuca sativa
Manes.11G062800 Manihot esculenta
Manes.11G063100 Manihot esculenta
Mapoly0001s0386 Marchantia polymorpha
Mapoly0145s0024 Marchantia polymorpha
MBI02_g33734_MAGBIO Magnolia biondii
MBI02_g44629_MAGBIO Magnolia biondii
MCO12G388 Micromonas commoda
MD17G1218700 Malus domestica
MD17G1219000 Malus domestica
Medtr2g104610 Medicago truncatula
Medtr2g104760 Medicago truncatula
MELO3C017853.2 Cucumis melo
MELO3C023452.2 Cucumis melo
MELO3C024817.2 Cucumis melo
Migut.I00727 Erythranthe guttata
Migut.I00728 Erythranthe guttata
Migut.I00729 Erythranthe guttata
MSTRG.22778 Avicennia marina
MSTRG.22779 Avicennia marina
Nitab4.5_0000233g0190 Nicotiana tabacum
Nitab4.5_0000315g0220 Nicotiana tabacum
Nitab4.5_0002481g0070 Nicotiana tabacum
Nitab4.5_0005460g0010 Nicotiana tabacum
Nn2g12225 Nelumbo nucifera
Nn2g12227 Nelumbo nucifera
Nn8g39686 Nelumbo nucifera
Nn8g39702 Nelumbo nucifera
Oeu010088.1 Olea europaea
Oeu055805.1 Olea europaea
Os02g0798800 Oryza sativa ssp. japonica
Os02g0798900 Oryza sativa ssp. japonica
Os03g0655700 Oryza sativa ssp. japonica
Os04g0370300 Oryza sativa ssp. japonica
Os04g0370500 Oryza sativa ssp. japonica
Os04g0370600 Oryza sativa ssp. japonica
Os04g0371600 Oryza sativa ssp. japonica
Os12g0516900 Oryza sativa ssp. japonica
Os12g0517000 Oryza sativa ssp. japonica
Os12g0517100 Oryza sativa ssp. japonica
Os12g0526600 Oryza sativa ssp. japonica
Peaxi162Scf00045g02262 Petunia axillaris
Peaxi162Scf00108g00131 Petunia axillaris
PGR031G2325 Punica granatum
PGR102G0990 Punica granatum
PGSC0003DMG400024263 Solanum tuberosum
PGSC0003DMG400030577 Solanum tuberosum
Phvul.005G181200 Phaseolus vulgaris
Phvul.005G181600 Phaseolus vulgaris
Potri.001G185600 Populus trichocarpa
Potri.017G053400 Populus trichocarpa
Pp3c19_5990 Physcomitrium patens
Pp3c22_9260 Physcomitrium patens
PRCOL_00006259 Prasinoderma coloniale
Prupe.3G094300 Prunus persica
Prupe.3G094500 Prunus persica
Psat5g303960 Pisum sativum
Psat5g304040 Pisum sativum
PSO017G5288 Papaver somniferum
PSO478G5069 Papaver somniferum
PSO541G0229 Papaver somniferum
PSO675G4738 Papaver somniferum
QL05p033532 Quercus lobata
QL05p033907 Quercus lobata
RcHm_v2.0_Chr2g0133701 Rosa chinensis
RcHm_v2.0_Chr2g0133781 Rosa chinensis
RcHm_v2.0_Chr2g0133821 Rosa chinensis
Rhsim08G0209300 Rhododendron simsii
Rhsim12G0188800 Rhododendron simsii
Sabra01G0154500 Salix brachista
Sabra17G0040600 Salix brachista
Sabra17G0045400 Salix brachista
SalBow6G3135 Salvia bowleyana
SalBow7G0151 Salvia bowleyana
SalBow7G1960 Salvia bowleyana
Sc11g0002740 Simmondsia chinensis
Sc12g0006740 Simmondsia chinensis
Sed0006349 Sechium edule
Sed0011728 Sechium edule
Sed0024162 Sechium edule
SEGI_15241 Sequoiadendron giganteum
SEGI_19467 Sequoiadendron giganteum
SEGI_33239 Sequoiadendron giganteum
SEGI_36084 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14738 Striga asiatica
SMO137G0150 Selaginella moellendorffii
SMO201G0043 Selaginella moellendorffii
Solyc05g009030.4 Solanum lycopersicum
Solyc09g011370.3 Solanum lycopersicum
Sopen05g004770 Solanum pennellii
Sopen09g006100 Solanum pennellii
Sp5g29930 Schrenkiella parvula
Sp5g35200 Schrenkiella parvula
Sp5g35220 Schrenkiella parvula
Sp5g35230 Schrenkiella parvula
Sp6g29830 Schrenkiella parvula
SpUn0049_0030 Schrenkiella parvula
TAR136G0001 Trochodendron aralioides
TAR625G0460 Trochodendron aralioides
TAR625G0584 Trochodendron aralioides
TAR636G1834 Trochodendron aralioides
TAR636G1963 Trochodendron aralioides
THA.LOC104808190 Tarenaya hassleriana
THA.LOC104808191 Tarenaya hassleriana
THA.LOC104812454 Tarenaya hassleriana
THA.LOC104813313 Tarenaya hassleriana
Thecc.01G153800 Theobroma cacao
Thecc.06G035700 Theobroma cacao
Thhalv10013695m.g Eutrema salsugineum
Thhalv10018507m.g Eutrema salsugineum
Thhalv10018649m.g Eutrema salsugineum
TPR.G16048 Trifolium pratense
TPR.G19151 Trifolium pratense
TPR.G19157 Trifolium pratense
TPR.G20702 Trifolium pratense
TPR.G8903 Trifolium pratense
TWI12G1056 Tripterygium wilfordii
TWI18G1017 Tripterygium wilfordii
unitig_0.g1110 Utricularia gibba
unitig_62.g23356 Utricularia gibba
vmacro06416 Vaccinium macrocarpon
vmacro16868 Vaccinium macrocarpon
vmacro16999 Vaccinium macrocarpon
vmacro17003 Vaccinium macrocarpon
vmacro17160 Vaccinium macrocarpon
vmacro18809 Vaccinium macrocarpon
vmacro19031 Vaccinium macrocarpon
VMungo1080G0486 Vigna mungo
VMungo1080G1544 Vigna mungo
VMungo1401G0001 Vigna mungo
Zm00001eb076030 Zea mays
Zm00001eb258000 Zea mays
Zm00001eb434270 Zea mays

User provided reference genes

Program Settings