Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p05120 Brassica napus
A09p66040 Brassica napus
Aa31LG9G1980 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.369 Anthoceros agrestis
Actinidia03719 Actinidia chinensis
Actinidia07154 Actinidia chinensis
Actinidia19662 Actinidia chinensis
Actinidia20443 Actinidia chinensis
Actinidia20444 Actinidia chinensis
Actinidia24117 Actinidia chinensis
Actinidia24118 Actinidia chinensis
Actinidia40021 Actinidia chinensis
Ah.01g003060 Amaranthus hybridus
AL1G18410 Arabidopsis lyrata
AL1G47140 Arabidopsis lyrata
Aqoxy1G01204 Aquilegia oxysepala
Aqoxy7G00183 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.02PMC1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BHY38Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D4VV12 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H0XM2A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LUG37R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q55GHJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R0WL9G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ST0ZZW Arachis hypogaea
AT1G08060 Arabidopsis thaliana
ATR0048G049 Amborella trichopoda
ATR0661G418 Amborella trichopoda
Atru.chr8.1403 Acer truncatum
Atru.chr8.1404 Acer truncatum
Atru.chr8.1406 Acer truncatum
Atru.chr8.1407 Acer truncatum
Atru.chr8.1408 Acer truncatum
AUR62022774 Chenopodium quinoa
AUR62029226 Chenopodium quinoa
AUR62029227 Chenopodium quinoa
BcaC05g24721 Brassica carinata
BcaC07g42507 Brassica carinata
BolC5t29368H Brassica oleracea
BolC8t52549H Brassica oleracea
BraA06t23719Z Brassica rapa
BraA09t41943Z Brassica rapa
C05p06080 Brassica napus
C08p50200 Brassica napus
CAN.G171.6 Capsicum annuum
CAN.G326.11 Capsicum annuum
CAN.G363.1 Capsicum annuum
CAN.G363.5 Capsicum annuum
CAN.G363.6 Capsicum annuum
CANSAT54G1673 Cannabis sativa
CARHR007860 Cardamine hirsuta
Carub.0001s0741 Capsella rubella
Ca_01379_v3 Cicer arietinum L.
Ca_01395_v3 Cicer arietinum L.
Ca_08849_v3 Cicer arietinum L.
Ca_08850_v3 Cicer arietinum L.
Ca_19290_v3 Cicer arietinum L.
Ca_19291_v3 Cicer arietinum L.
Cc01_g10870 Coffea canephora
Cc06_g04010 Coffea canephora
CDE02G2939 Ceratophyllum demersum
CDE02G3605 Ceratophyllum demersum
Cfa009123 Carpinus fangiana
Cfa011296 Carpinus fangiana
Cfa017947 Carpinus fangiana
Ciclev10027663m.g Citrus clementina
Ciclev10029237m.g Citrus clementina
CiPaw.14G085200 Carya illinoinensis
ClCG03G002980 Citrullus lanatus
COL.COLO4_18304 Corchorus olitorius
COL.COLO4_18305 Corchorus olitorius
COL.COLO4_26992 Corchorus olitorius
Cpa.g.sc311.2 Carica papaya
Cpa.g.sc311.4 Carica papaya
Cpa.g.sc311.5 Carica papaya
CsaV3_1G013920 Cucumis sativus L.
CSS0007832 Camellia sinensis var. sinensis
CSS0009803 Camellia sinensis var. sinensis
CSS0012038 Camellia sinensis var. sinensis
CSS0014452 Camellia sinensis var. sinensis
CSS0037936 Camellia sinensis var. sinensis
CSS0040255 Camellia sinensis var. sinensis
CSS0041121 Camellia sinensis var. sinensis
CSS0042132 Camellia sinensis var. sinensis
CSS0045135 Camellia sinensis var. sinensis
DCAR_006068 Daucus carota
DCAR_006069 Daucus carota
DCAR_006070 Daucus carota
DCAR_020831 Daucus carota
DCAR_022760 Daucus carota
DCAR_025378 Daucus carota
Dinv01067 Davidia involucrata
Dinv32718 Davidia involucrata
Dinv32719 Davidia involucrata
Dinv37298 Davidia involucrata
Duzib128G0909 Durio zibethinus
Duzib168G0647 Durio zibethinus
ECA238G1293 Erigeron canadensis
ECA248G2037 Erigeron canadensis
ECA248G2414 Erigeron canadensis
ECA248G2804 Erigeron canadensis
ECA248G3660 Erigeron canadensis
EL10Ac7g16595 Beta vulgaris
EL10Ac9g22555 Beta vulgaris
Eucgr.B02518 Eucalyptus grandis
Eucgr.G00328 Eucalyptus grandis
FAN07G0419 Fragaria x ananassa
FAN07G1966 Fragaria x ananassa
FAN07G2797 Fragaria x ananassa
FAN11G3960 Fragaria x ananassa
FAN12G2222 Fragaria x ananassa
FAN16G2569 Fragaria x ananassa
FAN17G2018 Fragaria x ananassa
FAN21G2742 Fragaria x ananassa
FAN25G3826 Fragaria x ananassa
FvH4_3g31740 Fragaria vesca
FvH4_4g08540 Fragaria vesca
Glyma.03G181800 Glycine max
Glyma.11G167601 Glycine max
Glyma.11G196900 Glycine max
Glyma.12G077400 Glycine max
Glyma.12G175400 Glycine max
Glyma.13G324500 Glycine max
Gohir.A05G105000 Gossypium hirsutum
Gohir.A08G199401 Gossypium hirsutum
Gohir.D05G104800 Gossypium hirsutum
Gohir.D08G216700 Gossypium hirsutum
Gorai.004G230500 Gossypium raimondii
Gorai.009G108800 Gossypium raimondii
GSVIVG01025215001 Vitis vinifera
GSVIVG01025216001 Vitis vinifera
HanXRQChr01g0019271 Helianthus annuus
HanXRQChr01g0019281 Helianthus annuus
HanXRQChr01g0019291 Helianthus annuus
HanXRQChr01g0019301 Helianthus annuus
HanXRQChr01g0027491 Helianthus annuus
HanXRQChr01g0027871 Helianthus annuus
HanXRQChr01g0027901 Helianthus annuus
HanXRQChr07g0206181 Helianthus annuus
HanXRQChr13g0405021 Helianthus annuus
HanXRQChr13g0421861 Helianthus annuus
HanXRQChr13g0421871 Helianthus annuus
HanXRQChr14g0452741 Helianthus annuus
Haze_23776 Corylus avellana
Haze_23778 Corylus avellana
Haze_23779 Corylus avellana
Haze_23780 Corylus avellana
Hma1.2p1_0058F.1_g032350 Hydrangea macrophylla
Hma1.2p1_0058F.1_g032355 Hydrangea macrophylla
Hma1.2p1_0058F.1_g032360 Hydrangea macrophylla
Hma1.2p1_0307F.1_g119910 Hydrangea macrophylla
Hma1.2p1_0307F.1_g119930 Hydrangea macrophylla
HPP92_003457 Vanilla planifolia
HPP92_003458 Vanilla planifolia
HPP92_003460 Vanilla planifolia
HPP92_003461 Vanilla planifolia
Hund01491 Selenicereus undatus
Lalb_Chr01g0004401 Lupinus albus
Lalb_Chr19g0137131 Lupinus albus
Lalb_Chr24g0394751 Lupinus albus
Lalb_Chr25g0289071 Lupinus albus
Lj1A201T35 Lonicera japonica
Lj1A201T36 Lonicera japonica
Lj1g0027821 Lotus japonicus
Lj1P201G10 Lonicera japonica
Lj1P201T10 Lonicera japonica
Lj2A114G39 Lonicera japonica
Lj2A114T42 Lonicera japonica
Lj2C1021G5 Lonicera japonica
Lj3g0013525 Lotus japonicus
Lj3g0022042 Lotus japonicus
Lj8C65T10 Lonicera japonica
Lsat_1_v5_gn_0_24581 Lactuca sativa
Lsat_1_v5_gn_1_53160 Lactuca sativa
Lsat_1_v5_gn_1_53241 Lactuca sativa
Lsat_1_v5_gn_1_63980 Lactuca sativa
Lsat_1_v5_gn_2_44480 Lactuca sativa
Lsat_1_v5_gn_2_98901 Lactuca sativa
Lsat_1_v5_gn_4_48720 Lactuca sativa
Lsat_1_v5_gn_5_87160 Lactuca sativa
Lsat_1_v5_gn_7_27800 Lactuca sativa
Manes.03G122401 Manihot esculenta
MD03G1121600 Malus domestica
MD11G1139900 Malus domestica
MD11G1140000 Malus domestica
Medtr2g094970 Medicago truncatula
Medtr2g094980 Medicago truncatula
Medtr2g095030 Medicago truncatula
Medtr4g058650 Medicago truncatula
Medtr6g452420 Medicago truncatula
Medtr7g101465 Medicago truncatula
Medtr8g008720 Medicago truncatula
MELO3C004905.2 Cucumis melo
Migut.D02244 Erythranthe guttata
Migut.J00530 Erythranthe guttata
Migut.N02586 Erythranthe guttata
MSTRG.12332 Avicennia marina
MSTRG.17786 Avicennia marina
MSTRG.18675 Avicennia marina
Nitab4.5_0000101g0280 Nicotiana tabacum
Nitab4.5_0000181g0180 Nicotiana tabacum
Nitab4.5_0000602g0020 Nicotiana tabacum
Nitab4.5_0005320g0010 Nicotiana tabacum
Nitab4.5_0006532g0030 Nicotiana tabacum
Nitab4.5_0006619g0010 Nicotiana tabacum
Nitab4.5_0006619g0020 Nicotiana tabacum
Nn2g11517 Nelumbo nucifera
Nn2g13727 Nelumbo nucifera
Nn6g33360 Nelumbo nucifera
Oeu002984.1 Olea europaea
Oeu013469.1 Olea europaea
Oeu036621.1 Olea europaea
Oeu056301.1 Olea europaea
Oeu056302.1 Olea europaea
Os06g0102800 Oryza sativa ssp. japonica
Os06g0102900 Oryza sativa ssp. japonica
Peaxi162Scf00123g00910 Petunia axillaris
Peaxi162Scf00167g00092 Petunia axillaris
Peaxi162Scf00948g00114 Petunia axillaris
PGR102G2473 Punica granatum
PGSC0003DMG400019409 Solanum tuberosum
Phvul.001G177901 Phaseolus vulgaris
Phvul.005G133500 Phaseolus vulgaris
Phvul.011G081700 Phaseolus vulgaris
Potri.004G212700 Populus trichocarpa
Potri.005G010133 Populus trichocarpa
Potri.013G006000 Populus trichocarpa
Pp3c16_16220 Physcomitrium patens
Prupe.6G104600 Prunus persica
Prupe.6G104700 Prunus persica
Psat0s2087g0160 Pisum sativum
Psat0s2088g0120 Pisum sativum
Psat0s3521g0040 Pisum sativum
Psat0s578g0160 Pisum sativum
Psat0s578g0240 Pisum sativum
Psat3g043480 Pisum sativum
Psat5g279720 Pisum sativum
Psat7g192240 Pisum sativum
PSO017G6475 Papaver somniferum
PSO063G0478 Papaver somniferum
PSO170G4318 Papaver somniferum
PSO339G1466 Papaver somniferum
PSO339G2779 Papaver somniferum
PSO384G1822 Papaver somniferum
PSO675G2075 Papaver somniferum
PSO675G7498 Papaver somniferum
PSO732G0413 Papaver somniferum
PSO732G0719 Papaver somniferum
PSO732G0800 Papaver somniferum
QL01p021572 Quercus lobata
QL01p026747 Quercus lobata
QL01p026770 Quercus lobata
QL02p046505 Quercus lobata
QL07p044103 Quercus lobata
QL93p0356_0080 Quercus lobata
QL93p2013_0009 Quercus lobata
RcHm_v2.0_Chr4g0405411 Rosa chinensis
RcHm_v2.0_Chr5g0058411 Rosa chinensis
Rhsim01G0215200 Rhododendron simsii
Rhsim03G0086800 Rhododendron simsii
Rhsim03G0086900 Rhododendron simsii
Rhsim05G0179600 Rhododendron simsii
Rhsim13G0096400 Rhododendron simsii
Sabra05G0007500 Salix brachista
SalBow3G2448 Salvia bowleyana
SalBow3G3117 Salvia bowleyana
Sc20g0005300 Simmondsia chinensis
Sc21g0003900 Simmondsia chinensis
Sed0004333 Sechium edule
Sed0006438 Sechium edule
Sed0024099 Sechium edule
Sed0024282 Sechium edule
Sed0024562 Sechium edule
SEGI_05581 Sequoiadendron giganteum
SEGI_12398 Sequoiadendron giganteum
SEGI_24058 Sequoiadendron giganteum
SEGI_32392 Sequoiadendron giganteum
SEGI_35020 Sequoiadendron giganteum
SEGI_40050 Sequoiadendron giganteum
SEGI_40731 Sequoiadendron giganteum
SGA_v2.0_scaffold116G32253 Striga asiatica
SGA_v2.0_scaffold127G34027 Striga asiatica
SGA_v2.0_scaffold180G39633 Striga asiatica
SGA_v2.0_scaffold40G15535 Striga asiatica
SGA_v2.0_scaffold40G15544 Striga asiatica
SHI21812 Sapria himalayana
SHI21813 Sapria himalayana
SHI21814 Sapria himalayana
SHI21820 Sapria himalayana
SHI21823 Sapria himalayana
SMO118G0150 Selaginella moellendorffii
Solyc06g010240.3 Solanum lycopersicum
Solyc10g011940.1 Solanum lycopersicum
Solyc10g011950.3 Solanum lycopersicum
Solyc11g069610.3 Solanum lycopersicum
Sopen06g005090 Solanum pennellii
Sopen10g005720 Solanum pennellii
Sopen11g028320 Solanum pennellii
Sp1g06700 Schrenkiella parvula
TAR369G0775 Trochodendron aralioides
TAR623G0602 Trochodendron aralioides
TAR629G3427 Trochodendron aralioides
TAR633G2605 Trochodendron aralioides
TAR636G3431 Trochodendron aralioides
THA.LOC104800593 Tarenaya hassleriana
THA.LOC104826377 Tarenaya hassleriana
Thecc.05G062600 Theobroma cacao
Thecc.09G343900 Theobroma cacao
Thhalv10006530m.g Eutrema salsugineum
TPR.G11481 Trifolium pratense
TPR.G14597 Trifolium pratense
TPR.G24998 Trifolium pratense
TPR.G25038 Trifolium pratense
TPR.G35671 Trifolium pratense
TPR.G35674 Trifolium pratense
TPR.G6160 Trifolium pratense
TPR.G9371 Trifolium pratense
TPR.G9836 Trifolium pratense
TWI31G0996 Tripterygium wilfordii
TWI74G0797 Tripterygium wilfordii
TWI79G1706 Tripterygium wilfordii
unitig_21.g20905 Utricularia gibba
unitig_21.g20906 Utricularia gibba
unitig_8.g3297 Utricularia gibba
vmacro03215 Vaccinium macrocarpon
vmacro07496 Vaccinium macrocarpon
vmacro14420 Vaccinium macrocarpon
vmacro14421 Vaccinium macrocarpon
vmacro14422 Vaccinium macrocarpon
vmacro20022 Vaccinium macrocarpon
vmacro20023 Vaccinium macrocarpon
vmacro20024 Vaccinium macrocarpon
VMungo1080G0782 Vigna mungo
VMungo1080G1631 Vigna mungo
VMungo1127G0656 Vigna mungo
VMungo1127G1376 Vigna mungo
VMungo1383G1330 Vigna mungo
VMungo1383G2762 Vigna mungo
VMungo1383G3719 Vigna mungo
Zm00001eb379660 Zea mays

User provided reference genes

Program Settings