Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16980 Brassica napus
A03p15590 Brassica napus
A03p56230 Brassica napus
A04p14630 Brassica napus
A07p20800 Brassica napus
A08p20990 Brassica napus
A10p10190 Brassica napus
Aa31LG3G8970 Aethionema arabicum
Aa31LG9G510 Aethionema arabicum
Aa31sc44G50 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1570 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5857 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5864 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1560 Anthoceros agrestis
Actinidia02825 Actinidia chinensis
Actinidia18540 Actinidia chinensis
Actinidia20149 Actinidia chinensis
Actinidia28352 Actinidia chinensis
Ah.01g006050 Amaranthus hybridus
Ah.01g021260 Amaranthus hybridus
AL7G27300 Arabidopsis lyrata
AL7G47910 Arabidopsis lyrata
AL8G27120 Arabidopsis lyrata
Aqoxy6G01290 Aquilegia oxysepala
Aqoxy6G01765 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3NHX52 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.92517S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EEEJ2F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HY6ZXD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KU5GBR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R3D3WS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T7LP77 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YN939X Arachis hypogaea
AT4G25740 Arabidopsis thaliana
AT5G41520 Arabidopsis thaliana
AT5G52650 Arabidopsis thaliana
ATR0584G225 Amborella trichopoda
ATR0661G578 Amborella trichopoda
ATR0705G127 Amborella trichopoda
Atru.chr1.352 Acer truncatum
Atru.chr9.2127 Acer truncatum
Atru.ctg97_1.29 Acer truncatum
AUR62006390 Chenopodium quinoa
AUR62010741 Chenopodium quinoa
AUR62019744 Chenopodium quinoa
AUR62029730 Chenopodium quinoa
BcaB01g04207 Brassica carinata
BcaB02g07889 Brassica carinata
BcaB03g12484 Brassica carinata
BcaB05g21970 Brassica carinata
BcaB06g27625 Brassica carinata
BcaB08g35620 Brassica carinata
BcaC01g06190 Brassica carinata
BcaC02g08954 Brassica carinata
BcaC04g20554 Brassica carinata
BcaC07g38210 Brassica carinata
BcaC08g44534 Brassica carinata
BolC1t02053H Brassica oleracea
BolC3t14223H Brassica oleracea
BolC4t26444H Brassica oleracea
BolC6t37181H Brassica oleracea
BolC7t45938H Brassica oleracea
BolC8t48631H Brassica oleracea
BolC9t57097H Brassica oleracea
BraA01t01654Z Brassica rapa
BraA03t10852Z Brassica rapa
BraA03t14693Z Brassica rapa
BraA04t17105Z Brassica rapa
BraA07t29771Z Brassica rapa
BraA08t34051Z Brassica rapa
C01p21300 Brassica napus
C03p18250 Brassica napus
C04p48530 Brassica napus
C06p19940 Brassica napus
C06p24550 Brassica napus
C07p54520 Brassica napus
C08p09650 Brassica napus
C09p42170 Brassica napus
CAN.G1459.7 Capsicum annuum
CAN.G566.50 Capsicum annuum
CANSAT21G0342 Cannabis sativa
CANSAT21G1215 Cannabis sativa
CANSAT78G0633 Cannabis sativa
CANSAT78G2437 Cannabis sativa
CARHR233190 Cardamine hirsuta
CARHR283550 Cardamine hirsuta
Carub.0007s1522 Capsella rubella
Carub.0007s3399 Capsella rubella
Carub.0008s1277 Capsella rubella
Ca_10945_v3 Cicer arietinum L.
Ca_24540_v3 Cicer arietinum L.
CBR_g24283 Chara braunii
CBR_g878 Chara braunii
Cc00_g04800 Coffea canephora
Cc00_g21680 Coffea canephora
Cc00_g32440 Coffea canephora
Cc00_g33560 Coffea canephora
Cc02_g02340 Coffea canephora
Cc04_g13150 Coffea canephora
Cc11_g01230 Coffea canephora
CDE09G1082 Ceratophyllum demersum
CDE11G0325 Ceratophyllum demersum
Ciclev10006024m.g Citrus clementina
Ciclev10022481m.g Citrus clementina
CiPaw.11G130600 Carya illinoinensis
CiPaw.12G090000 Carya illinoinensis
ClCG01G002390 Citrullus lanatus
ClCG07G007960 Citrullus lanatus
COL.COLO4_08371 Corchorus olitorius
COL.COLO4_30307 Corchorus olitorius
Cpa.g.sc107.113 Carica papaya
Cpa.g.sc180.29 Carica papaya
Cre09.g411100 Chlamydomonas reinhardtii
CsaV3_4G006060 Cucumis sativus L.
CsaV3_5G002500 Cucumis sativus L.
CSS0016020 Camellia sinensis var. sinensis
CSS0039436 Camellia sinensis var. sinensis
DCAR_010657 Daucus carota
DCAR_014521 Daucus carota
DCAR_020272 Daucus carota
Dinv35256 Davidia involucrata
Dinv37603 Davidia involucrata
Dinv38905 Davidia involucrata
Dinv43853 Davidia involucrata
Duzib068G0440 Durio zibethinus
Duzib068G1231 Durio zibethinus
Duzib084G0112 Durio zibethinus
Duzib084G0619 Durio zibethinus
Duzib205G0207 Durio zibethinus
Duzib205G1918 Durio zibethinus
ECA232G2946 Erigeron canadensis
ECA233G0396 Erigeron canadensis
ECA233G4907 Erigeron canadensis
ECA238G2782 Erigeron canadensis
EL10Ac3g05416 Beta vulgaris
EL10Ac5g12827 Beta vulgaris
Eucgr.D01820 Eucalyptus grandis
Eucgr.E00655 Eucalyptus grandis
FAN01G1248 Fragaria x ananassa
FAN03G1722 Fragaria x ananassa
FAN03G2529 Fragaria x ananassa
FAN04G0764 Fragaria x ananassa
FAN08G3210 Fragaria x ananassa
FAN13G2665 Fragaria x ananassa
FAN15G2306 Fragaria x ananassa
FAN18G1551 Fragaria x ananassa
FAN20G0496 Fragaria x ananassa
FAN24G0218 Fragaria x ananassa
FAN27G2052 Fragaria x ananassa
FvH4_2g15610 Fragaria vesca
FvH4_5g03060 Fragaria vesca
Glyma.01G069200 Glycine max
Glyma.01G222100 Glycine max
Glyma.05G211100 Glycine max
Glyma.08G017500 Glycine max
Glyma.11G021700 Glycine max
Gohir.A03G020700 Gossypium hirsutum
Gohir.A08G114900 Gossypium hirsutum
Gohir.A09G040600 Gossypium hirsutum
Gohir.A09G182800 Gossypium hirsutum
Gohir.A09G191600 Gossypium hirsutum
Gohir.D03G148000 Gossypium hirsutum
Gohir.D08G135200 Gossypium hirsutum
Gohir.D09G044200 Gossypium hirsutum
Gohir.D09G186000 Gossypium hirsutum
Gorai.003G155500 Gossypium raimondii
Gorai.004G138400 Gossypium raimondii
Gorai.006G051300 Gossypium raimondii
Gorai.006G208700 Gossypium raimondii
GSVIVG01019409001 Vitis vinifera
GSVIVG01028854001 Vitis vinifera
HanXRQChr09g0265371 Helianthus annuus
HanXRQChr12g0381091 Helianthus annuus
HanXRQChr15g0494121 Helianthus annuus
Haze_00049 Corylus avellana
Haze_00434 Corylus avellana
Haze_08771 Corylus avellana
Haze_27052 Corylus avellana
Hma1.2p1_0274F.1_g110110 Hydrangea macrophylla
HPP92_001087 Vanilla planifolia
HPP92_001993 Vanilla planifolia
HPP92_013756 Vanilla planifolia
HPP92_013758 Vanilla planifolia
Hund04789 Selenicereus undatus
Hund11717 Selenicereus undatus
Hund14278 Selenicereus undatus
Lalb_Chr05g0211701 Lupinus albus
Lalb_Chr05g0224551 Lupinus albus
Lalb_Chr09g0320841 Lupinus albus
Lalb_Chr16g0377061 Lupinus albus
Lalb_Chr21g0305251 Lupinus albus
Lj4g0020688 Lotus japonicus
Lj8A16T36 Lonicera japonica
LjContig00312_ERROPOS870357g0005754 Lotus japonicus
Lsat_1_v5_gn_2_131381 Lactuca sativa
Lsat_1_v5_gn_8_6540 Lactuca sativa
Lsat_1_v5_gn_9_56641 Lactuca sativa
Manes.02G017301 Manihot esculenta
Manes.04G000100 Manihot esculenta
Manes.06G152900 Manihot esculenta
Manes.14G022200 Manihot esculenta
Mapoly0028s0093 Marchantia polymorpha
MBI04_g12219_MAGBIO Magnolia biondii
MBI11_g02028_MAGBIO Magnolia biondii
MCO09G392 Micromonas commoda
MD00G1171100 Malus domestica
MD06G1089600 Malus domestica
MD14G1084900 Malus domestica
MD14G1110700 Malus domestica
Medtr5g010025 Medicago truncatula
Medtr8g098850 Medicago truncatula
MELO3C005706.2 Cucumis melo
MELO3C016343.2 Cucumis melo
Migut.F00287 Erythranthe guttata
Migut.F01084 Erythranthe guttata
MSTRG.27083 Avicennia marina
MSTRG.8709 Avicennia marina
Nitab4.5_0002420g0040 Nicotiana tabacum
Nitab4.5_0003658g0040 Nicotiana tabacum
Nitab4.5_0004891g0040 Nicotiana tabacum
Nitab4.5_0011818g0010 Nicotiana tabacum
Nn1g01645 Nelumbo nucifera
Nn2g11257 Nelumbo nucifera
Nn6g33282 Nelumbo nucifera
Oeu027871.1 Olea europaea
Oeu032743.1 Olea europaea
Oeu061664.1 Olea europaea
Os01g0962600 Oryza sativa ssp. japonica
Os02g0549600 Oryza sativa ssp. japonica
Os04g0430100 Oryza sativa ssp. japonica
Peaxi162Scf00037g01127 Petunia axillaris
Peaxi162Scf00071g00529 Petunia axillaris
PGR031G1843 Punica granatum
PGR042G0410 Punica granatum
PGR042G3313 Punica granatum
PGSC0003DMG400024757 Solanum tuberosum
PGSC0003DMG402029274 Solanum tuberosum
Phvul.002G159600 Phaseolus vulgaris
Phvul.002G292500 Phaseolus vulgaris
Phvul.009G004600 Phaseolus vulgaris
Potri.004G073500 Populus trichocarpa
Potri.005G040100 Populus trichocarpa
Potri.013G027900 Populus trichocarpa
Potri.017G146700 Populus trichocarpa
Pp3c10_21170 Physcomitrium patens
Pp3c10_990 Physcomitrium patens
Pp3c14_1810 Physcomitrium patens
Pp3c1_18400 Physcomitrium patens
Pp3c23_13100 Physcomitrium patens
Pp3c24_2340 Physcomitrium patens
Pp3c2_18620 Physcomitrium patens
PRCOL_00006312 Prasinoderma coloniale
Prupe.1G534700 Prunus persica
Prupe.1G534900 Prunus persica
Prupe.2G037600 Prunus persica
Prupe.2G157900 Prunus persica
Psat0s5319g0040 Pisum sativum
Psat2g183200 Pisum sativum
Psat7g030640 Pisum sativum
PSO017G1453 Papaver somniferum
PSO170G1561 Papaver somniferum
PSO339G0949 Papaver somniferum
PSO339G1633 Papaver somniferum
PSO339G2025 Papaver somniferum
PSO339G2208 Papaver somniferum
PSO541G3381 Papaver somniferum
PSO675G2814 Papaver somniferum
PSO782G4595 Papaver somniferum
QL03p053636 Quercus lobata
QL09p012704 Quercus lobata
QL12p031954 Quercus lobata
RcHm_v2.0_Chr1g0361491 Rosa chinensis
RcHm_v2.0_Chr7g0196731 Rosa chinensis
Rhsim01G0165300 Rhododendron simsii
Rhsim07G0011500 Rhododendron simsii
Sabra04G0048200 Salix brachista
Sabra05G0039200 Salix brachista
Sabra13G0028500 Salix brachista
Sabra17G0122900 Salix brachista
SalBow2G1835 Salvia bowleyana
SalBow2G2528 Salvia bowleyana
SalBow2G3464 Salvia bowleyana
Sc01g0009780 Simmondsia chinensis
Sc13g0009200 Simmondsia chinensis
Sc19g0001220 Simmondsia chinensis
Sed0003913 Sechium edule
Sed0015730 Sechium edule
Sed0016458 Sechium edule
Sed0019809 Sechium edule
SEGI_26230 Sequoiadendron giganteum
SEGI_40339 Sequoiadendron giganteum
SGA_v2.0_scaffold263G46027 Striga asiatica
SGA_v2.0_scaffold44G16752 Striga asiatica
SGA_v2.0_scaffold55G19712 Striga asiatica
SGA_v2.0_scaffold60G21114 Striga asiatica
SHI07104 Sapria himalayana
SMO118G0336 Selaginella moellendorffii
Solyc01g099670.3 Solanum lycopersicum
Solyc12g096540.2 Solanum lycopersicum
Sopen01g043180 Solanum pennellii
Sopen12g032370 Solanum pennellii
Sp6g14820 Schrenkiella parvula
Sp7g23770 Schrenkiella parvula
TAR374G0444 Trochodendron aralioides
TAR375G0423 Trochodendron aralioides
TAR629G1252 Trochodendron aralioides
THA.LOC104809370 Tarenaya hassleriana
THA.LOC104811954 Tarenaya hassleriana
THA.LOC104817822 Tarenaya hassleriana
THA.LOC104825112 Tarenaya hassleriana
Thecc.03G184700 Theobroma cacao
Thecc.03G285600 Theobroma cacao
Thhalv10014804m.g Eutrema salsugineum
Thhalv10026365m.g Eutrema salsugineum
Thhalv10027958m.g Eutrema salsugineum
TPR.G12911 Trifolium pratense
TPR.G24825 Trifolium pratense
TPR.G32091 Trifolium pratense
TPR.G39887 Trifolium pratense
TPR.G6702 Trifolium pratense
TPR.G6714 Trifolium pratense
TWI23G0565 Tripterygium wilfordii
TWI39G0716 Tripterygium wilfordii
TWI81G0712 Tripterygium wilfordii
unitig_42.g32292 Utricularia gibba
unitig_42.g32293 Utricularia gibba
unitig_736.g22784 Utricularia gibba
unitig_899.g14756 Utricularia gibba
vmacro13242 Vaccinium macrocarpon
vmacro20903 Vaccinium macrocarpon
VMungo0251G3796 Vigna mungo
VMungo1215G0496 Vigna mungo
VMungo1309G0361 Vigna mungo
Zm00001eb024580 Zea mays
Zm00001eb082850 Zea mays
Zm00001eb140330 Zea mays
Zm00001eb174410 Zea mays
Zm00001eb362490 Zea mays
Zm00001eb402130 Zea mays
Zm00001eb422490 Zea mays

User provided reference genes

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