Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p16810 Brassica napus
A04p22850 Brassica napus
A05p15330 Brassica napus
A10p29940 Brassica napus
Aa31LG5G6560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.412 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2966 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.641 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.642 Anthoceros agrestis
Actinidia23215 Actinidia chinensis
Actinidia23871 Actinidia chinensis
Actinidia27063 Actinidia chinensis
Actinidia29079 Actinidia chinensis
Actinidia32623 Actinidia chinensis
Actinidia34471 Actinidia chinensis
Actinidia34472 Actinidia chinensis
Actinidia34473 Actinidia chinensis
Ah.12g058930 Amaranthus hybridus
Ah.15g096290 Amaranthus hybridus
AL201U10030 Arabidopsis lyrata
AL4G24890 Arabidopsis lyrata
AL6G16550 Arabidopsis lyrata
Aqoxy1G01321 Aquilegia oxysepala
Aqoxy2G00818 Aquilegia oxysepala
Aqoxy2G02236 Aquilegia oxysepala
Aqoxy2G02257 Aquilegia oxysepala
Aqoxy2G02258 Aquilegia oxysepala
Aqoxy4G03129 Aquilegia oxysepala
Aqoxy59s002 Aquilegia oxysepala
Aqoxy59s003 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.68UH5I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ASUB10 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P25ZJB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q96DWE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V4RJ43 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YH79ID Arachis hypogaea
AT2G30110 Arabidopsis thaliana
AT5G06460 Arabidopsis thaliana
ATR0174G039 Amborella trichopoda
Atru.chr3.4151 Acer truncatum
Atru.chr3.4152 Acer truncatum
Atru.chr8.2304 Acer truncatum
AUR62009697 Chenopodium quinoa
AUR62030510 Chenopodium quinoa
AUR62030784 Chenopodium quinoa
AUR62036249 Chenopodium quinoa
BcaB01g04128 Brassica carinata
BcaB02g10297 Brassica carinata
BcaB06g28341 Brassica carinata
BcaC01g06027 Brassica carinata
BcaC02g08051 Brassica carinata
BcaC02g08053 Brassica carinata
BcaC02g08054 Brassica carinata
BcaC02g11093 Brassica carinata
BcaC06g32372 Brassica carinata
BcaC06g32574 Brassica carinata
BolC3t14357H Brassica oleracea
BolC4t23584H Brassica oleracea
BolC4t27412H Brassica oleracea
BolC9t59780H Brassica oleracea
BraA03t10969Z Brassica rapa
BraA04t17822Z Brassica rapa
BraA05t20451Z Brassica rapa
BraA10t45033Z Brassica rapa
C03p19790 Brassica napus
C04p20590 Brassica napus
C04p59000 Brassica napus
C09p70350 Brassica napus
CAN.G122.1 Capsicum annuum
CAN.G1767.2 Capsicum annuum
CAN.G1767.3 Capsicum annuum
CAN.G226.27 Capsicum annuum
CAN.G869.7 Capsicum annuum
CARHR123420 Cardamine hirsuta
CARHR206730 Cardamine hirsuta
Carub.0004s1125 Capsella rubella
Carub.0006s0534 Capsella rubella
Ca_05634_v3 Cicer arietinum L.
Ca_05635_v3 Cicer arietinum L.
Ca_14988_v3 Cicer arietinum L.
Ca_30103_v3 Cicer arietinum L.
CBR_g22049 Chara braunii
CBR_g22051 Chara braunii
CBR_g39452 Chara braunii
Cc01_g14650 Coffea canephora
Cc02_g04390 Coffea canephora
CDE06G1961 Ceratophyllum demersum
CDE12G0299 Ceratophyllum demersum
Cfa011745 Carpinus fangiana
Cfa017137 Carpinus fangiana
Cfa022258 Carpinus fangiana
Ciclev10010950m.g Citrus clementina
Ciclev10027704m.g Citrus clementina
CiPaw.09G213300 Carya illinoinensis
CiPaw.13G072700 Carya illinoinensis
CiPaw.14G056100 Carya illinoinensis
ClCG02G019350 Citrullus lanatus
COL.COLO4_11115 Corchorus olitorius
COL.COLO4_11119 Corchorus olitorius
COL.COLO4_11120 Corchorus olitorius
COL.COLO4_33285 Corchorus olitorius
Cpa.g.sc2.388 Carica papaya
Cpa.g.sc2.389 Carica papaya
Cre09.g386400 Chlamydomonas reinhardtii
CsaV3_6G015970 Cucumis sativus L.
CSS0000842 Camellia sinensis var. sinensis
CSS0012882 Camellia sinensis var. sinensis
CSS0016426 Camellia sinensis var. sinensis
CSS0029834 Camellia sinensis var. sinensis
CSS0048766 Camellia sinensis var. sinensis
DCAR_001974 Daucus carota
DCAR_005876 Daucus carota
DCAR_007353 Daucus carota
DCAR_012283 Daucus carota
DCAR_012284 Daucus carota
DCAR_016578 Daucus carota
DCAR_017875 Daucus carota
DCAR_028876 Daucus carota
Dinv08431 Davidia involucrata
Dinv08432 Davidia involucrata
Dinv12142 Davidia involucrata
Dinv28677 Davidia involucrata
Duzib150G0146 Durio zibethinus
Duzib150G1152 Durio zibethinus
Duzib168G0787 Durio zibethinus
Duzib170G1054 Durio zibethinus
ECA232G0796 Erigeron canadensis
ECA236G0203 Erigeron canadensis
ECA236G4307 Erigeron canadensis
ECA236G4985 Erigeron canadensis
ECA238G0320 Erigeron canadensis
ECA246G2754 Erigeron canadensis
ECA247G2881 Erigeron canadensis
EL10Ac5g12513 Beta vulgaris
EL10Ac7g15890 Beta vulgaris
Eucgr.B02226 Eucalyptus grandis
Eucgr.J01907 Eucalyptus grandis
FAN02G0352 Fragaria x ananassa
FAN05G2480 Fragaria x ananassa
FAN05G2714 Fragaria x ananassa
FAN05G2866 Fragaria x ananassa
FAN05G4907 Fragaria x ananassa
FAN08G0353 Fragaria x ananassa
FAN09G1757 Fragaria x ananassa
FAN11G1269 Fragaria x ananassa
FAN14G3016 Fragaria x ananassa
FAN16G0674 Fragaria x ananassa
FAN21G3183 Fragaria x ananassa
FAN23G1512 Fragaria x ananassa
FAN25G0352 Fragaria x ananassa
FvH4_3g39370 Fragaria vesca
FvH4_6g10930 Fragaria vesca
Glyma.02G229700 Glycine max
Glyma.11G166100 Glycine max
Glyma.14G196800 Glycine max
Glyma.18G058900 Glycine max
Gohir.A03G027000 Gossypium hirsutum
Gohir.A03G027100 Gossypium hirsutum
Gohir.A03G027200 Gossypium hirsutum
Gohir.A08G202800 Gossypium hirsutum
Gohir.A13G233800 Gossypium hirsutum
Gohir.A13G233900 Gossypium hirsutum
Gohir.D03G141500 Gossypium hirsutum
Gohir.D03G141600 Gossypium hirsutum
Gohir.D08G219800 Gossypium hirsutum
Gohir.D13G239400 Gossypium hirsutum
Gohir.D13G239500 Gossypium hirsutum
Gorai.003G148200 Gossypium raimondii
Gorai.003G148600 Gossypium raimondii
Gorai.004G233800 Gossypium raimondii
Gorai.013G270300 Gossypium raimondii
Gorai.013G270400 Gossypium raimondii
GSVIVG01015667001 Vitis vinifera
GSVIVG01024680001 Vitis vinifera
GSVIVG01030304001 Vitis vinifera
HanXRQChr04g0101281 Helianthus annuus
HanXRQChr04g0103721 Helianthus annuus
HanXRQChr04g0105841 Helianthus annuus
HanXRQChr06g0181461 Helianthus annuus
HanXRQChr08g0229051 Helianthus annuus
Haze_11045 Corylus avellana
Haze_21058 Corylus avellana
Haze_24386 Corylus avellana
Haze_26786 Corylus avellana
Hma1.2p1_0146F.1_g065490 Hydrangea macrophylla
Hma1.2p1_0841F.1_g226830 Hydrangea macrophylla
HPP92_007565 Vanilla planifolia
HPP92_023753 Vanilla planifolia
HPP92_023754 Vanilla planifolia
HPP92_025107 Vanilla planifolia
Hund05039 Selenicereus undatus
Hund10947 Selenicereus undatus
Hund14914 Selenicereus undatus
Lalb_Chr15g0083111 Lupinus albus
Lalb_Chr18g0051261 Lupinus albus
Lalb_Chr20g0114821 Lupinus albus
Lalb_Chr20g0114831 Lupinus albus
Lj1A129G71 Lonicera japonica
Lj2C1089G6 Lonicera japonica
Lj2C69G11 Lonicera japonica
Lj6g0027201 Lotus japonicus
Lj9A530T26 Lonicera japonica
Lj9A530T27 Lonicera japonica
Lj9C530T7 Lonicera japonica
LjContig00141g0008279 Lotus japonicus
Lsat_1_v5_gn_8_102781 Lactuca sativa
Lsat_1_v5_gn_9_18560 Lactuca sativa
Manes.02G214500 Manihot esculenta
Manes.09G109900 Manihot esculenta
Manes.18G144400 Manihot esculenta
Mapoly0119s0054 Marchantia polymorpha
Mapoly0146s0008 Marchantia polymorpha
MBI03_g10783_MAGBIO Magnolia biondii
MCO07G363 Micromonas commoda
MCO15G292 Micromonas commoda
MD04G1163500 Malus domestica
MD11G1065700 Malus domestica
MD12G1177300 Malus domestica
Medtr5g057095 Medicago truncatula
Medtr5g072480 Medicago truncatula
MELO3C026839.2 Cucumis melo
Migut.J00118 Erythranthe guttata
Migut.L01515 Erythranthe guttata
Migut.N00769 Erythranthe guttata
MSTRG.17886 Avicennia marina
MSTRG.18984 Avicennia marina
MSTRG.5554 Avicennia marina
Nitab4.5_0000230g0050 Nicotiana tabacum
Nitab4.5_0000967g0050 Nicotiana tabacum
Nitab4.5_0001941g0030 Nicotiana tabacum
Nitab4.5_0004676g0020 Nicotiana tabacum
Nn2g10962 Nelumbo nucifera
Oeu017147.1 Olea europaea
Oeu027339.1 Olea europaea
Oeu057630.1 Olea europaea
Os03g0294900 Oryza sativa ssp. japonica
Os07g0692900 Oryza sativa ssp. japonica
Os11g0106400 Oryza sativa ssp. japonica
Os12g0105950 Oryza sativa ssp. japonica
Os12g0105975 Oryza sativa ssp. japonica
Peaxi162Scf00053g02116 Petunia axillaris
Peaxi162Scf00709g00320 Petunia axillaris
Peaxi162Scf01132g00351 Petunia axillaris
PGR102G1983 Punica granatum
PGSC0003DMG400020558 Solanum tuberosum
PGSC0003DMG400026648 Solanum tuberosum
Phvul.006G072111 Phaseolus vulgaris
Phvul.006G072122 Phaseolus vulgaris
Phvul.006G072200 Phaseolus vulgaris
Phvul.008G258500 Phaseolus vulgaris
Potri.001G280600 Populus trichocarpa
Potri.009G075700 Populus trichocarpa
Potri.009G075800 Populus trichocarpa
Pp3c10_14850 Physcomitrium patens
Pp3c13_11410 Physcomitrium patens
Pp3c3_10180 Physcomitrium patens
Pp3c3_25370 Physcomitrium patens
Pp3c3_25380 Physcomitrium patens
Pp3c4_1120 Physcomitrium patens
Pp3c4_1170 Physcomitrium patens
PRCOL_00000857 Prasinoderma coloniale
PRCOL_00003249 Prasinoderma coloniale
Prupe.6G051900 Prunus persica
Prupe.6G282900 Prunus persica
Psat2g055360 Pisum sativum
Psat5g157080 Pisum sativum
PSO017G2329 Papaver somniferum
PSO063G3059 Papaver somniferum
PSO170G2816 Papaver somniferum
PSO339G1219 Papaver somniferum
PSO407G0399 Papaver somniferum
PSO801G0232 Papaver somniferum
QL01p039700 Quercus lobata
QL07p034210 Quercus lobata
RcHm_v2.0_Chr3g0462201 Rosa chinensis
RcHm_v2.0_Chr5g0070911 Rosa chinensis
Rhsim01G0239900 Rhododendron simsii
Rhsim05G0223100 Rhododendron simsii
Rhsim05G0223200 Rhododendron simsii
Rhsim05G0223400 Rhododendron simsii
Rhsim13G0066100 Rhododendron simsii
Sabra02G0136300 Salix brachista
Sabra02G0136400 Salix brachista
Sabra09G0057600 Salix brachista
Sabra09G0057700 Salix brachista
Sabra16G0174200 Salix brachista
Sabra16G0174300 Salix brachista
SalBow2G1194 Salvia bowleyana
SalBow2G3063 Salvia bowleyana
SalBow5G0482 Salvia bowleyana
Sc06g0003300 Simmondsia chinensis
Sc17g0004190 Simmondsia chinensis
Sc21g0005080 Simmondsia chinensis
Sc22g0002630 Simmondsia chinensis
Sed0013729 Sechium edule
Sed0021179 Sechium edule
SEGI_00840 Sequoiadendron giganteum
SEGI_03624 Sequoiadendron giganteum
SEGI_06585 Sequoiadendron giganteum
SEGI_06892 Sequoiadendron giganteum
SEGI_09602 Sequoiadendron giganteum
SEGI_37684 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30133 Striga asiatica
SGA_v2.0_scaffold199G41158 Striga asiatica
SMO118G0416 Selaginella moellendorffii
SMO232G0129 Selaginella moellendorffii
Solyc06g007320.3 Solanum lycopersicum
Solyc09g018450.3 Solanum lycopersicum
Sopen06g002240 Solanum pennellii
Sopen09g011640 Solanum pennellii
Sp4g12690 Schrenkiella parvula
Sp6g36400 Schrenkiella parvula
TAR357G0002 Trochodendron aralioides
TAR369G1009 Trochodendron aralioides
TAR633G2106 Trochodendron aralioides
THA.LOC104800756 Tarenaya hassleriana
THA.LOC104815811 Tarenaya hassleriana
THA.LOC104826795 Tarenaya hassleriana
Thecc.09G354600 Theobroma cacao
Thecc.09G354700 Theobroma cacao
Thhalv10012525m.g Eutrema salsugineum
Thhalv10016166m.g Eutrema salsugineum
TPR.G32907 Trifolium pratense
TPR.G34744 Trifolium pratense
TPR.G5737 Trifolium pratense
TWI31G1072 Tripterygium wilfordii
TWI31G1274 Tripterygium wilfordii
TWI32G0735 Tripterygium wilfordii
TWI79G0789 Tripterygium wilfordii
unitig_0.g438 Utricularia gibba
unitig_0.g439 Utricularia gibba
unitig_60.g25556 Utricularia gibba
vmacro02937 Vaccinium macrocarpon
vmacro14614 Vaccinium macrocarpon
vmacro20313 Vaccinium macrocarpon
VMungo0540G1180 Vigna mungo
VMungo0647G1601 Vigna mungo
Zm00001eb013620 Zea mays
Zm00001eb094220 Zea mays
Zm00001eb195000 Zea mays
Zm00001eb331520 Zea mays
Zm00001eb404860 Zea mays

User provided reference genes

Program Settings