Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p36910 Brassica napus
A03p19470 Brassica napus
A03p40190 Brassica napus
A04p26750 Brassica napus
A05p10560 Brassica napus
A05p32340 Brassica napus
A06p48400 Brassica napus
A08p04980 Brassica napus
A08p05020 Brassica napus
Aa31LG8G4390 Aethionema arabicum
Aa31LG9G15180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2838 Anthoceros agrestis
Actinidia01061 Actinidia chinensis
Actinidia02540 Actinidia chinensis
Actinidia03411 Actinidia chinensis
Actinidia07531 Actinidia chinensis
Actinidia18505 Actinidia chinensis
Actinidia25925 Actinidia chinensis
Actinidia31486 Actinidia chinensis
Ah.07g203700 Amaranthus hybridus
Ah.12g053840 Amaranthus hybridus
AL1G54830 Arabidopsis lyrata
AL3G30520 Arabidopsis lyrata
AL4G31200 Arabidopsis lyrata
Aqoxy2G00343 Aquilegia oxysepala
Aqoxy2G02524 Aquilegia oxysepala
Aqoxy3G02596 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0G05EQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0KII0J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.105FTE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1L1QBU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.48S44R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6ZMA90 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.70FWBP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.94J6HI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D5URA7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GQR1Y8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I3MFNG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IS849L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M5N7L7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N1DMCX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q27SQW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q2BBVU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RLM54Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SRQ5BD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TK66KG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U4ZNRL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z3AIPR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z4VNZV Arachis hypogaea
AT1G48240 Arabidopsis thaliana
AT2G35190 Arabidopsis thaliana
AT3G17440 Arabidopsis thaliana
ATR0681G176 Amborella trichopoda
ATR0796G151 Amborella trichopoda
Atru.chr4.3142 Acer truncatum
Atru.chr9.1151 Acer truncatum
AUR62002559 Chenopodium quinoa
AUR62007197 Chenopodium quinoa
AUR62018805 Chenopodium quinoa
AUR62029979 Chenopodium quinoa
BcaB02g09470 Brassica carinata
BcaB04g18942 Brassica carinata
BcaB04g20842 Brassica carinata
BcaB06g25843 Brassica carinata
BcaB06g25844 Brassica carinata
BcaB06g25845 Brassica carinata
BcaB06g28808 Brassica carinata
BcaB06g28831 Brassica carinata
BcaB07g33182 Brassica carinata
BcaC01g03764 Brassica carinata
BcaC01g05737 Brassica carinata
BcaC02g07732 Brassica carinata
BcaC02g11589 Brassica carinata
BcaC05g28790 Brassica carinata
BcaC07g37161 Brassica carinata
BcaC09g48701 Brassica carinata
BolC1t04653H Brassica oleracea
BolC3t14668H Brassica oleracea
BolC3t17163H Brassica oleracea
BolC4t22954H Brassica oleracea
BolC4t27898H Brassica oleracea
BolC5t33639H Brassica oleracea
BolC8t47346H Brassica oleracea
BraA01t03750Z Brassica rapa
BraA03t11200Z Brassica rapa
BraA03t13169Z Brassica rapa
BraA04t18179Z Brassica rapa
BraA05t19994Z Brassica rapa
BraA05t22062Z Brassica rapa
BraA06t27708Z Brassica rapa
BraA08t32521Z Brassica rapa
BraA08t32524Z Brassica rapa
C01p46800 Brassica napus
C03p22690 Brassica napus
C03p48810 Brassica napus
C04p13640 Brassica napus
C04p64150 Brassica napus
C05p48990 Brassica napus
C08p05320 Brassica napus
CAN.G1445.12 Capsicum annuum
CAN.G484.89 Capsicum annuum
CANSAT21G1966 Cannabis sativa
CANSAT78G1207 Cannabis sativa
CARHR037870 Cardamine hirsuta
CARHR092760 Cardamine hirsuta
CARHR129350 Cardamine hirsuta
Carub.0001s3738 Capsella rubella
Carub.0003s1716 Capsella rubella
Carub.0004s1688 Capsella rubella
Ca_02361_v3 Cicer arietinum L.
Ca_21379_v3 Cicer arietinum L.
Ca_22027_v3 Cicer arietinum L.
Ca_30147_v3 Cicer arietinum L.
CBR_g48845 Chara braunii
CBR_g50079 Chara braunii
Cc03_g00180 Coffea canephora
Cc08_g01500 Coffea canephora
CDE02G0541 Ceratophyllum demersum
CDE02G3602 Ceratophyllum demersum
CDE08G1327 Ceratophyllum demersum
CDE09G0673 Ceratophyllum demersum
CDE11G0529 Ceratophyllum demersum
Cfa012354 Carpinus fangiana
Cfa015725 Carpinus fangiana
Ciclev10005631m.g Citrus clementina
Ciclev10021747m.g Citrus clementina
CiPaw.01G129800 Carya illinoinensis
CiPaw.02G069600 Carya illinoinensis
CiPaw.11G084800 Carya illinoinensis
CiPaw.12G056700 Carya illinoinensis
ClCG06G004180 Citrullus lanatus
ClCG06G004220 Citrullus lanatus
ClCG10G002080 Citrullus lanatus
COL.COLO4_06698 Corchorus olitorius
Cpa.g.sc146.28 Carica papaya
Cpa.g.sc76.5 Carica papaya
Cre07.g342050 Chlamydomonas reinhardtii
CsaV3_3G002170 Cucumis sativus L.
CsaV3_6G000220 Cucumis sativus L.
CSS0004385 Camellia sinensis var. sinensis
CSS0009084 Camellia sinensis var. sinensis
CSS0027514 Camellia sinensis var. sinensis
DCAR_004515 Daucus carota
DCAR_008314 Daucus carota
DCAR_023401 Daucus carota
DCAR_026949 Daucus carota
Dinv18025 Davidia involucrata
Dinv25158 Davidia involucrata
Dinv28893 Davidia involucrata
Dinv29514 Davidia involucrata
Duzib068G0774 Durio zibethinus
Duzib084G0192 Durio zibethinus
Duzib151G0196 Durio zibethinus
Duzib205G0875 Durio zibethinus
Duzib212G0821 Durio zibethinus
ECA246G1415 Erigeron canadensis
ECA246G2157 Erigeron canadensis
EL10Ac3g06261 Beta vulgaris
EL10Ac5g12222 Beta vulgaris
Eucgr.D02141 Eucalyptus grandis
Eucgr.H04121 Eucalyptus grandis
FAN04G1571 Fragaria x ananassa
FAN07G1580 Fragaria x ananassa
FAN08G0775 Fragaria x ananassa
FAN12G0745 Fragaria x ananassa
FAN13G0395 Fragaria x ananassa
FAN17G2420 Fragaria x ananassa
FAN18G2388 Fragaria x ananassa
FvH4_4g21470 Fragaria vesca
FvH4_5g20760 Fragaria vesca
Glyma.05G067700 Glycine max
Glyma.13G119900 Glycine max
Glyma.17G040400 Glycine max
Glyma.17G149800 Glycine max
Gohir.A02G058100 Gossypium hirsutum
Gohir.A03G003500 Gossypium hirsutum
Gohir.A08G161800 Gossypium hirsutum
Gohir.D02G063900 Gossypium hirsutum
Gohir.D03G168900 Gossypium hirsutum
Gohir.D08G181800 Gossypium hirsutum
Gorai.003G179000 Gossypium raimondii
Gorai.004G190700 Gossypium raimondii
Gorai.005G071800 Gossypium raimondii
GSVIVG01013276001 Vitis vinifera
GSVIVG01017683001 Vitis vinifera
HanXRQChr09g0245831 Helianthus annuus
HanXRQChr17g0535691 Helianthus annuus
Haze_00773 Corylus avellana
Haze_08341 Corylus avellana
Hma1.2p1_0052F.1_g030260 Hydrangea macrophylla
Hma1.2p1_0177F.1_g077990 Hydrangea macrophylla
Hma1.2p1_0553F.1_g177740 Hydrangea macrophylla
Hma1.2p1_1510F.1_g287860 Hydrangea macrophylla
Hma1.2p1_1672F.1_g296870 Hydrangea macrophylla
HPP92_010871 Vanilla planifolia
HPP92_016966 Vanilla planifolia
HPP92_017031 Vanilla planifolia
HPP92_025659 Vanilla planifolia
HPP92_025886 Vanilla planifolia
Hund11302 Selenicereus undatus
Hund12252 Selenicereus undatus
Hund14468 Selenicereus undatus
Lalb_Chr05g0220811 Lupinus albus
Lalb_Chr07g0181741 Lupinus albus
Lalb_Chr08g0233011 Lupinus albus
Lalb_Chr09g0324041 Lupinus albus
Lalb_Chr11g0073541 Lupinus albus
Lalb_Chr16g0386331 Lupinus albus
Lalb_Chr23g0276051 Lupinus albus
Lj2A252G53 Lonicera japonica
Lj3A840T139 Lonicera japonica
Lj4g0012719 Lotus japonicus
Lj4g0026409 Lotus japonicus
Lj6A700T85 Lonicera japonica
Lj6g0004133 Lotus japonicus
Lj6g0011501 Lotus japonicus
Lj8C279G4 Lonicera japonica
Lj8C286G7 Lonicera japonica
Lsat_1_v5_gn_3_15780 Lactuca sativa
Lsat_1_v5_gn_6_117920 Lactuca sativa
Manes.03G211500 Manihot esculenta
Manes.17G022842 Manihot esculenta
Mapoly0031s0037 Marchantia polymorpha
MBI04_g20747_MAGBIO Magnolia biondii
MBI07_g07340_MAGBIO Magnolia biondii
MBI18_g09640_MAGBIO Magnolia biondii
MCO16G207 Micromonas commoda
MD03G1055100 Malus domestica
MD04G1053700 Malus domestica
MD11G1036500 Malus domestica
MD13G1140900 Malus domestica
MD16G1137000 Malus domestica
Medtr2g045960 Medicago truncatula
Medtr4g099140 Medicago truncatula
Medtr4g123910 Medicago truncatula
MELO3C013889.2 Cucumis melo
MELO3C021229.2 Cucumis melo
MELO3C021232.2 Cucumis melo
Migut.E00818 Erythranthe guttata
Migut.G00006 Erythranthe guttata
Migut.O00359 Erythranthe guttata
Migut.O00398 Erythranthe guttata
MSTRG.10182 Avicennia marina
MSTRG.13767 Avicennia marina
MSTRG.1956 Avicennia marina
MSTRG.21743 Avicennia marina
Nitab4.5_0000895g0240 Nicotiana tabacum
Nitab4.5_0001981g0010 Nicotiana tabacum
Nitab4.5_0004665g0070 Nicotiana tabacum
Nitab4.5_0011581g0020 Nicotiana tabacum
Nn1g00712 Nelumbo nucifera
Nn3g21905 Nelumbo nucifera
Nn6g33726 Nelumbo nucifera
Oeu014323.2 Olea europaea
Oeu022703.1 Olea europaea
Oeu028052.1 Olea europaea
Oeu049820.1 Olea europaea
Oeu054288.1 Olea europaea
Os03g0369800 Oryza sativa ssp. japonica
Os06g0715100 Oryza sativa ssp. japonica
Os07g0637400 Oryza sativa ssp. japonica
Peaxi162Scf00668g00311 Petunia axillaris
Peaxi162Scf00715g00120 Petunia axillaris
PGR004G0827 Punica granatum
PGR031G0447 Punica granatum
PGSC0003DMG400001854 Solanum tuberosum
PGSC0003DMG400004602 Solanum tuberosum
Phvul.003G121300 Phaseolus vulgaris
Phvul.003G226600 Phaseolus vulgaris
Potri.001G149200 Populus trichocarpa
Potri.003G085200 Populus trichocarpa
Potri.010G001900 Populus trichocarpa
Pp3c15_360 Physcomitrium patens
Pp3c17_10260 Physcomitrium patens
Pp3c1_24590 Physcomitrium patens
Pp3c26_1180 Physcomitrium patens
Pp3c9_1060 Physcomitrium patens
PRCOL_00002993 Prasinoderma coloniale
Prupe.1G105900 Prunus persica
Prupe.5G052300 Prunus persica
Psat0s2012g0160 Pisum sativum
Psat1g017680 Pisum sativum
Psat4g076600 Pisum sativum
PSO063G6707 Papaver somniferum
PSO170G5953 Papaver somniferum
PSO210G7213 Papaver somniferum
PSO357G0505 Papaver somniferum
PSO761G0403 Papaver somniferum
PSO782G2963 Papaver somniferum
QL06p014144 Quercus lobata
QL12p008078 Quercus lobata
QL12p008129 Quercus lobata
QL12p008257 Quercus lobata
QL12p008276 Quercus lobata
QL12p008322 Quercus lobata
QL93p0007_0004 Quercus lobata
QL93p0012_0013 Quercus lobata
QL93p0012_0034 Quercus lobata
QL93p0012_0097 Quercus lobata
QL93p0012_0136 Quercus lobata
QL93p0089_0072 Quercus lobata
QL93p0092_0002 Quercus lobata
QL93p0340_0031 Quercus lobata
RcHm_v2.0_Chr4g0427401 Rosa chinensis
RcHm_v2.0_Chr7g0206541 Rosa chinensis
Rhsim04G0248000 Rhododendron simsii
Rhsim07G0119800 Rhododendron simsii
Sabra01G0119200 Salix brachista
Sabra03G0055300 Salix brachista
Sabra10G0001500 Salix brachista
SalBow8G3271 Salvia bowleyana
Sc13g0007720 Simmondsia chinensis
Sc22g0001190 Simmondsia chinensis
Sed0006691 Sechium edule
Sed0024737 Sechium edule
SEGI_05986 Sequoiadendron giganteum
SEGI_09986 Sequoiadendron giganteum
SGA_v2.0_scaffold157G37381 Striga asiatica
SGA_v2.0_scaffold64G22030 Striga asiatica
SHI00058 Sapria himalayana
SHI00059 Sapria himalayana
SMO200G0021 Selaginella moellendorffii
SMO200G0131 Selaginella moellendorffii
SMO365G0019 Selaginella moellendorffii
Solyc08g077550.3 Solanum lycopersicum
Solyc12g098950.2 Solanum lycopersicum
Sopen08g026120 Solanum pennellii
Sopen12g033700 Solanum pennellii
Sp1g35200 Schrenkiella parvula
Sp3g15610 Schrenkiella parvula
Sp4g17410 Schrenkiella parvula
TAR365G0418 Trochodendron aralioides
TAR375G0178 Trochodendron aralioides
TAR376G1195 Trochodendron aralioides
TAR485G0002 Trochodendron aralioides
TAR626G1753 Trochodendron aralioides
TAR628G0347 Trochodendron aralioides
TAR629G3352 Trochodendron aralioides
TAR636G0017 Trochodendron aralioides
TAR636G1148 Trochodendron aralioides
TAR636G3293 Trochodendron aralioides
THA.LOC104802621 Tarenaya hassleriana
THA.LOC104807941 Tarenaya hassleriana
THA.LOC104814456 Tarenaya hassleriana
Thecc.03G237400 Theobroma cacao
Thecc.04G312400 Theobroma cacao
Thhalv10011716m.g Eutrema salsugineum
Thhalv10017097m.g Eutrema salsugineum
Thhalv10021318m.g Eutrema salsugineum
TPR.G12623 Trifolium pratense
TPR.G16115 Trifolium pratense
TPR.G17140 Trifolium pratense
TPR.G31208 Trifolium pratense
TWI15G0917 Tripterygium wilfordii
TWI15G0945 Tripterygium wilfordii
TWI53G0604 Tripterygium wilfordii
TWI60G1277 Tripterygium wilfordii
TWI81G0135 Tripterygium wilfordii
unitig_22.g6958 Utricularia gibba
unitig_52.g17214 Utricularia gibba
unitig_8.g2887 Utricularia gibba
vmacro08009 Vaccinium macrocarpon
vmacro14116 Vaccinium macrocarpon
vmacro23242 Vaccinium macrocarpon
vmacro23243 Vaccinium macrocarpon
VMungo0464G0981 Vigna mungo
VMungo1215G2466 Vigna mungo
Zm00001eb017970 Zea mays
Zm00001eb109980 Zea mays
Zm00001eb272330 Zea mays
Zm00001eb328740 Zea mays

User provided reference genes

Program Settings