Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31csc239G10 Aethionema arabicum
Aa31csc464G70 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1250 Anthoceros agrestis
Ah.10g028160 Amaranthus hybridus
AL3G44430 Arabidopsis lyrata
AL3G44440 Arabidopsis lyrata
Aqoxy12s029 Aquilegia oxysepala
Aqoxy12s039 Aquilegia oxysepala
Aqoxy4G02026 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0TB2XJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2YD7KU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4LX9HH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6K92H0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ALHF99 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D81V2I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DGV151 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G5DDSF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GG5HWM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IEGY60 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JN64LG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KX3NGM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MJZL7X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q8C5RR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T7VYQ6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TPY4ZQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XXM48B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZY6KWR Arachis hypogaea
AT2G07675 Arabidopsis thaliana
AT2G07751 Arabidopsis thaliana
ATCG00905 Arabidopsis thaliana
ATCG01230 Arabidopsis thaliana
ATMG00980 Arabidopsis thaliana
ATMG00990 Arabidopsis thaliana
ATR1169G002 Amborella trichopoda
Atru.chr3.4001 Acer truncatum
Atru.chr4.739 Acer truncatum
Atru.chr6.700 Acer truncatum
BcaC05g26888 Brassica carinata
BNapus_Darmor_BZH_scaffold_147p00040 Brassica napus
BNapus_Darmor_BZH_scaffold_234p00060 Brassica napus
BolC2t10588H Brassica oleracea
BolSC28t60355H Brassica oleracea
BolSC28t60356H Brassica oleracea
BolSC29t60558H Brassica oleracea
BolSC29t60626H Brassica oleracea
BolSC35t60681H Brassica oleracea
BolSC35t60716H Brassica oleracea
BolSC37t60786H Brassica oleracea
BolSC45t60898H Brassica oleracea
BolSC45t60921H Brassica oleracea
BolSC47t61057H Brassica oleracea
BolSC47t61069H Brassica oleracea
BolSC49t61131H Brassica oleracea
BolSC49t61154H Brassica oleracea
BraSC103t45495Z Brassica rapa
BraSC138t45523Z Brassica rapa
BraSC143t45667Z Brassica rapa
BraSC48t46255Z Brassica rapa
BraSC48t46256Z Brassica rapa
BraSC58t46451Z Brassica rapa
BraSC59t46512Z Brassica rapa
BraSC59t46559Z Brassica rapa
BraSC77t46664Z Brassica rapa
BraSC77t46665Z Brassica rapa
C06p21310 Brassica napus
C06p23120 Brassica napus
C09p24710 Brassica napus
CAN.G1741.3 Capsicum annuum
CAN.G266.7 Capsicum annuum
CAN.G351.18 Capsicum annuum
CAN.G889.5 Capsicum annuum
CANSAT25G2613 Cannabis sativa
CARHR282350 Cardamine hirsuta
CARHR283240 Cardamine hirsuta
CARHR283250 Cardamine hirsuta
CARHR287250 Cardamine hirsuta
CDE02G1246 Ceratophyllum demersum
CDE02G2710 Ceratophyllum demersum
CiPaw.08G042500 Carya illinoinensis
CiPaw.08G172200 Carya illinoinensis
CiPaw.08G173300 Carya illinoinensis
ClCG00G001510 Citrullus lanatus
COL.COLO4_01630 Corchorus olitorius
COL.COLO4_02562 Corchorus olitorius
COL.COLO4_03024 Corchorus olitorius
COL.COLO4_03981 Corchorus olitorius
COL.COLO4_04481 Corchorus olitorius
Cpa.g.sc87.115 Carica papaya
Cre02.g144400 Chlamydomonas reinhardtii
Cre08.g378900 Chlamydomonas reinhardtii
CsaV3_1G007720 Cucumis sativus L.
CsaV3_UNG208560 Cucumis sativus L.
CsaV3_UNG210040 Cucumis sativus L.
CSS0016656 Camellia sinensis var. sinensis
CSS0035753 Camellia sinensis var. sinensis
DCAR_016146 Daucus carota
DCAR_032435 Daucus carota
DCAR_032436 Daucus carota
Duzib132G0580 Durio zibethinus
EL10Ac9g21012 Beta vulgaris
EL10As15g24102 Beta vulgaris
EL10As6g23662 Beta vulgaris
Eucgr.E00717 Eucalyptus grandis
Eucgr.H01184 Eucalyptus grandis
Eucgr.H03985 Eucalyptus grandis
Eucgr.K01909 Eucalyptus grandis
Eucgr.L01873 Eucalyptus grandis
FAN03G1410 Fragaria x ananassa
FAN06G1419 Fragaria x ananassa
FAN06G2328 Fragaria x ananassa
FAN08G2386 Fragaria x ananassa
FAN10G4039 Fragaria x ananassa
FAN13G1785 Fragaria x ananassa
FAN18G4430 Fragaria x ananassa
FAN21G0802 Fragaria x ananassa
FvH4_5g00530 Fragaria vesca
FvH4_7g21740 Fragaria vesca
FvH4_c3g00110 Fragaria vesca
Gohir.1Z050302 Gossypium hirsutum
Gohir.A01G071550 Gossypium hirsutum
Gohir.A01G143838 Gossypium hirsutum
Gohir.A02G100900 Gossypium hirsutum
Gohir.A03G020550 Gossypium hirsutum
Gohir.A03G089701 Gossypium hirsutum
Gohir.A03G116614 Gossypium hirsutum
Gohir.A04G039361 Gossypium hirsutum
Gohir.A04G061885 Gossypium hirsutum
Gohir.A04G062885 Gossypium hirsutum
Gohir.A05G323772 Gossypium hirsutum
Gohir.A08G093662 Gossypium hirsutum
Gohir.A08G123750 Gossypium hirsutum
Gohir.A09G045600 Gossypium hirsutum
Gohir.A09G045746 Gossypium hirsutum
Gohir.A09G103232 Gossypium hirsutum
Gohir.A09G107601 Gossypium hirsutum
Gohir.A11G179832 Gossypium hirsutum
Gohir.A11G179998 Gossypium hirsutum
Gohir.A11G295125 Gossypium hirsutum
Gohir.A13G086470 Gossypium hirsutum
Gohir.D01G137751 Gossypium hirsutum
Gohir.D02G090033 Gossypium hirsutum
Gohir.D02G117554 Gossypium hirsutum
Gohir.D04G096628 Gossypium hirsutum
Gohir.D08G108608 Gossypium hirsutum
Gohir.D10G177500 Gossypium hirsutum
Gohir.D10G181800 Gossypium hirsutum
Gohir.D10G245316 Gossypium hirsutum
Gohir.D12G017000 Gossypium hirsutum
Gorai.004G116100 Gossypium raimondii
Gorai.005G077900 Gossypium raimondii
Gorai.005G100800 Gossypium raimondii
Gorai.005G170800 Gossypium raimondii
Gorai.008G017300 Gossypium raimondii
Gorai.011G198300 Gossypium raimondii
Gorai.011G203400 Gossypium raimondii
Gorai.011G282800 Gossypium raimondii
Gorai.012G049000 Gossypium raimondii
GSVIVG01002752001 Vitis vinifera
HanXRQChr00c0055g0571461 Helianthus annuus
HanXRQChr01g0009331 Helianthus annuus
HanXRQChr01g0017121 Helianthus annuus
HanXRQChr01g0027141 Helianthus annuus
HanXRQChr08g0224261 Helianthus annuus
HanXRQChr08g0236211 Helianthus annuus
HanXRQChr10g0297181 Helianthus annuus
HanXRQChr10g0305211 Helianthus annuus
HanXRQChr12g0367961 Helianthus annuus
HanXRQChr12g0367971 Helianthus annuus
HanXRQChr12g0370991 Helianthus annuus
HanXRQChr15g0488691 Helianthus annuus
HanXRQChr16g0504411 Helianthus annuus
HanXRQCPg0580291 Helianthus annuus
HanXRQCPg0580431 Helianthus annuus
HanXRQMTg0579641 Helianthus annuus
Haze_27062 Corylus avellana
Hma1.2p1_1244F.1_g270080 Hydrangea macrophylla
Hund07989 Selenicereus undatus
Hund08791 Selenicereus undatus
Hund20482 Selenicereus undatus
Hund22781 Selenicereus undatus
Hund23966 Selenicereus undatus
Hund27587 Selenicereus undatus
Hund27634 Selenicereus undatus
Hund27666 Selenicereus undatus
Hund27817 Selenicereus undatus
Hund27899 Selenicereus undatus
Hund27922 Selenicereus undatus
Hund28083 Selenicereus undatus
Hund28867 Selenicereus undatus
Hund28882 Selenicereus undatus
Hund28936 Selenicereus undatus
Hund28943 Selenicereus undatus
Hund28948 Selenicereus undatus
Hund28957 Selenicereus undatus
Hund28958 Selenicereus undatus
Hund28972 Selenicereus undatus
Hund28982 Selenicereus undatus
Hund29029 Selenicereus undatus
Hund29085 Selenicereus undatus
Hund29092 Selenicereus undatus
Hund29106 Selenicereus undatus
Hund29117 Selenicereus undatus
Hund29471 Selenicereus undatus
Hund29893 Selenicereus undatus
Hund30457 Selenicereus undatus
Hund30653 Selenicereus undatus
Hund30764 Selenicereus undatus
Hund30783 Selenicereus undatus
Hund30784 Selenicereus undatus
Hund30785 Selenicereus undatus
Hund30802 Selenicereus undatus
Hund30819 Selenicereus undatus
Hund30820 Selenicereus undatus
Hund30821 Selenicereus undatus
Hund30822 Selenicereus undatus
Hund30823 Selenicereus undatus
Hund30824 Selenicereus undatus
Hund30825 Selenicereus undatus
Hund30826 Selenicereus undatus
Hund30827 Selenicereus undatus
Hund30828 Selenicereus undatus
Hund30829 Selenicereus undatus
Hund30830 Selenicereus undatus
Hund30831 Selenicereus undatus
Hund30832 Selenicereus undatus
Hund30833 Selenicereus undatus
Hund30837 Selenicereus undatus
Hund30843 Selenicereus undatus
Hund30846 Selenicereus undatus
Hund30919 Selenicereus undatus
Hund30957 Selenicereus undatus
Hund30987 Selenicereus undatus
Hund30988 Selenicereus undatus
Hund31006 Selenicereus undatus
Hund31036 Selenicereus undatus
Hund31039 Selenicereus undatus
Hund31051 Selenicereus undatus
Hund31105 Selenicereus undatus
Lalb_Chr00c24g0406961 Lupinus albus
Lalb_Chr00c24g0406971 Lupinus albus
Lalb_Chr03g0038861 Lupinus albus
Lalb_Chr03g0038871 Lupinus albus
Lalb_Chr17g0337391 Lupinus albus
Lalb_Chr17g0337401 Lupinus albus
Lj2A1221T109 Lonicera japonica
LjContig00315g0013534 Lotus japonicus
LjContig00315g0018892 Lotus japonicus
Lsat_1_v5_gn_1_24001 Lactuca sativa
Lsat_1_v5_gn_1_95121 Lactuca sativa
Lsat_1_v5_gn_2_20620 Lactuca sativa
Lsat_1_v5_gn_4_116900 Lactuca sativa
Lsat_1_v5_gn_5_16521 Lactuca sativa
Lsat_1_v5_gn_5_16541 Lactuca sativa
Lsat_1_v5_gn_6_106840 Lactuca sativa
Lsat_1_v5_gn_7_341 Lactuca sativa
Lsat_1_v5_gn_8_97380 Lactuca sativa
Manes.06G021801 Manihot esculenta
Manes.08G083670 Manihot esculenta
Manes.09G011803 Manihot esculenta
Mapoly0163s0017 Marchantia polymorpha
MBI05_g23316_MAGBIO Magnolia biondii
MBI07_g03189_MAGBIO Magnolia biondii
MBI08_g48230_MAGBIO Magnolia biondii
MBI10_g41320_MAGBIO Magnolia biondii
MBI10_g41321_MAGBIO Magnolia biondii
MD05G1172200 Malus domestica
MD16G1012400 Malus domestica
Medtr0002s0280 Medicago truncatula
Medtr0082s0040 Medicago truncatula
Medtr0625s0020 Medicago truncatula
Medtr2g040140 Medicago truncatula
Medtr7g055840 Medicago truncatula
Medtr7g055910 Medicago truncatula
MELO3C000106.2 Cucumis melo
MELO3C003986.2 Cucumis melo
Migut.F01472 Erythranthe guttata
MSTRG.3525 Avicennia marina
MSTRG.3526 Avicennia marina
Nitab4.5_0000172g0450 Nicotiana tabacum
Nitab4.5_0000172g0980 Nicotiana tabacum
Nitab4.5_0000172g1180 Nicotiana tabacum
Nitab4.5_0000172g1710 Nicotiana tabacum
Nitab4.5_0000349g0200 Nicotiana tabacum
Nitab4.5_0000692g0250 Nicotiana tabacum
Nitab4.5_0000844g0170 Nicotiana tabacum
Nitab4.5_0000844g0210 Nicotiana tabacum
Nitab4.5_0000844g0260 Nicotiana tabacum
Nitab4.5_0001170g0090 Nicotiana tabacum
Nitab4.5_0001170g0100 Nicotiana tabacum
Nitab4.5_0001348g0140 Nicotiana tabacum
Nitab4.5_0001770g0040 Nicotiana tabacum
Nitab4.5_0001770g0050 Nicotiana tabacum
Nitab4.5_0001770g0060 Nicotiana tabacum
Nitab4.5_0001788g0290 Nicotiana tabacum
Nitab4.5_0001788g0300 Nicotiana tabacum
Nitab4.5_0001788g0340 Nicotiana tabacum
Nitab4.5_0001796g0230 Nicotiana tabacum
Nitab4.5_0001796g0270 Nicotiana tabacum
Nitab4.5_0002347g0060 Nicotiana tabacum
Nitab4.5_0002716g0110 Nicotiana tabacum
Nitab4.5_0003382g0070 Nicotiana tabacum
Nitab4.5_0003713g0020 Nicotiana tabacum
Nitab4.5_0004137g0060 Nicotiana tabacum
Nitab4.5_0004721g0050 Nicotiana tabacum
Nitab4.5_0005853g0070 Nicotiana tabacum
Nitab4.5_0005853g0080 Nicotiana tabacum
Nitab4.5_0006683g0140 Nicotiana tabacum
Nitab4.5_0008835g0060 Nicotiana tabacum
Nitab4.5_0009421g0030 Nicotiana tabacum
Nitab4.5_0012234g0060 Nicotiana tabacum
Nitab4.5_0016174g0030 Nicotiana tabacum
Oeu002614.1 Olea europaea
Oeu038563.1 Olea europaea
Oeu040255.1 Olea europaea
Os12g0423142 Oryza sativa ssp. japonica
Peaxi162Scf00001g04024 Petunia axillaris
Peaxi162Scf00002g00218 Petunia axillaris
Peaxi162Scf00489g00021 Petunia axillaris
Peaxi162Scf00588g00111 Petunia axillaris
PGR028G0006 Punica granatum
PGR028G0020 Punica granatum
PGR031G1129 Punica granatum
PGSC0003DMG400004141 Solanum tuberosum
PGSC0003DMG400021744 Solanum tuberosum
PGSC0003DMG400029876 Solanum tuberosum
Phvul.009G090248 Phaseolus vulgaris
Potri.007G062001 Populus trichocarpa
Potri.008G208300 Populus trichocarpa
Pp3c21_8460 Physcomitrium patens
Prupe.6G146800 Prunus persica
Psat0s4951g0160 Pisum sativum
PSO017G6547 Papaver somniferum
PSO170G5129 Papaver somniferum
PSO357G0201 Papaver somniferum
PSO384G1460 Papaver somniferum
QL93p0823_0004 Quercus lobata
RcHm_v2.0_Chr5g0080691 Rosa chinensis
RcHm_v2.0_Chr7g0201871 Rosa chinensis
RcHm_v2.0_MTg0498381 Rosa chinensis
RcHm_v2.0_MTg0498391 Rosa chinensis
RhsimPtG0002900 Rhododendron simsii
SabraMtG0001800 Salix brachista
SalBow1G0875 Salvia bowleyana
SalBow1G2962 Salvia bowleyana
SalBow1G5537 Salvia bowleyana
SalBow1G5748 Salvia bowleyana
SalBow1G6489 Salvia bowleyana
SalBow1G6915 Salvia bowleyana
SalBow1G7521 Salvia bowleyana
SalBow2G0293 Salvia bowleyana
Sc03g0005010 Simmondsia chinensis
Sc04g0005510 Simmondsia chinensis
Sc04g0005520 Simmondsia chinensis
Sc16g0005190 Simmondsia chinensis
Sc25g0005880 Simmondsia chinensis
Sed0003644 Sechium edule
Sed0019436 Sechium edule
Sed0022288 Sechium edule
Sed0024579 Sechium edule
SEGI_23966 Sequoiadendron giganteum
SGA_v2.0_scaffold140G35498 Striga asiatica
SGA_v2.0_scaffold255G45400 Striga asiatica
SGA_v2.0_scaffold255G45513 Striga asiatica
SGA_v2.0_scaffold893G53704 Striga asiatica
SHI00829 Sapria himalayana
SHI15029 Sapria himalayana
SHI26649 Sapria himalayana
SHI27347 Sapria himalayana
SHI27348 Sapria himalayana
SHI33930 Sapria himalayana
SHI34220 Sapria himalayana
SHI34613 Sapria himalayana
SHI34614 Sapria himalayana
SHI34630 Sapria himalayana
SHI35190 Sapria himalayana
SHI35326 Sapria himalayana
SHI35334 Sapria himalayana
SHI35455 Sapria himalayana
SHI35457 Sapria himalayana
SHI35980 Sapria himalayana
SHI36142 Sapria himalayana
SHI36266 Sapria himalayana
SHI36368 Sapria himalayana
SHI36369 Sapria himalayana
SHI36383 Sapria himalayana
SHI36567 Sapria himalayana
SHI36581 Sapria himalayana
SHI36629 Sapria himalayana
SHI36771 Sapria himalayana
SHI36782 Sapria himalayana
SHI36935 Sapria himalayana
SHI36966 Sapria himalayana
SHI37065 Sapria himalayana
SHI37617 Sapria himalayana
SHI38206 Sapria himalayana
SHI38210 Sapria himalayana
SHI38315 Sapria himalayana
SHI38566 Sapria himalayana
SHI39119 Sapria himalayana
SHI39476 Sapria himalayana
SHI39477 Sapria himalayana
SHI39752 Sapria himalayana
SHI39777 Sapria himalayana
SHI39812 Sapria himalayana
SHI40461 Sapria himalayana
SHI40932 Sapria himalayana
SHI41240 Sapria himalayana
SHI41241 Sapria himalayana
SHI42173 Sapria himalayana
SHI42503 Sapria himalayana
SHI43533 Sapria himalayana
SHI43781 Sapria himalayana
SHI43970 Sapria himalayana
SHI44576 Sapria himalayana
SHI44670 Sapria himalayana
SHI44671 Sapria himalayana
SHI45144 Sapria himalayana
SHI45925 Sapria himalayana
SHI46090 Sapria himalayana
SHI46259 Sapria himalayana
SHI46260 Sapria himalayana
SHI46908 Sapria himalayana
SHI47712 Sapria himalayana
SHI48150 Sapria himalayana
SHI48307 Sapria himalayana
SHI48750 Sapria himalayana
SHI48751 Sapria himalayana
SHI48902 Sapria himalayana
SHI48903 Sapria himalayana
SHI49107 Sapria himalayana
SHI49108 Sapria himalayana
SHI49663 Sapria himalayana
SHI49748 Sapria himalayana
SHI49794 Sapria himalayana
SHI49994 Sapria himalayana
SHI50386 Sapria himalayana
SHI50512 Sapria himalayana
SHI50625 Sapria himalayana
SHI50801 Sapria himalayana
SHI51105 Sapria himalayana
SHI51228 Sapria himalayana
SHI51612 Sapria himalayana
SHI51658 Sapria himalayana
SHI51700 Sapria himalayana
SHI52150 Sapria himalayana
SHI53045 Sapria himalayana
SHI53190 Sapria himalayana
SHI53369 Sapria himalayana
SHI53372 Sapria himalayana
SHI53577 Sapria himalayana
SHI53781 Sapria himalayana
SHI54131 Sapria himalayana
SHI54160 Sapria himalayana
SHI54219 Sapria himalayana
SHI54388 Sapria himalayana
SMO116G0334 Selaginella moellendorffii
SMO310G0002 Selaginella moellendorffii
SMO364G0929 Selaginella moellendorffii
Solyc00g500115.1 Solanum lycopersicum
Solyc00g500225.1 Solanum lycopersicum
Solyc00g500261.1 Solanum lycopersicum
Solyc00g500361.1 Solanum lycopersicum
Sopen00g002640 Solanum pennellii
TAR365G0238 Trochodendron aralioides
TAR636G2145 Trochodendron aralioides
TPR.G36985 Trifolium pratense
TPR.G37274 Trifolium pratense
TWI32G1151 Tripterygium wilfordii
unitig_87.g28032 Utricularia gibba
unitig_91.g26487 Utricularia gibba
unitig_91.g26518 Utricularia gibba
VMungo0464G0583 Vigna mungo
VMungo0580G0002 Vigna mungo
VMungo1309G2626 Vigna mungo

User provided reference genes

Program Settings